TomoSeq data search

Data search

Results for MligTC455_37697

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37697	237	4.94	Mlig455_001651	Neo: - Age: -	KMT5B	Mlig455_001651 {REF} {Length: 2806} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=35.3]} {Human: ENSG00000110066, KMT5B, lysine methyltransferase 5B, [RH, Score=239, Expect=2e-74]} {Mouse: ENSMUSG00000045098, Kmt5b, lysine methyltransferase 5B, [RH, Score=244, Expect=2e-72]} {Dmel: FBgn0025639, Hmt4-20, Histone methyltransferase 4-20, [RH, Score=248, Expect=1e-72]} {Celegans: WBGene00016313, set-4, Histone-lysine N-methyltransferase Suv4-20, [RH, Score=191, Expect=2e-57]} {Smed: dd_Smed_v6_11927_0_1, dd_Smed_v6_11927_0_1, [Score=224, Expect=3e-66]} {RNA1509_22106} {RNA1310_24481} {RNA815_15745}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_37697

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.618	2.814	0.66808	1.00000
RegionR2	0.066	2.814	0.91613	1.00000
RegionR3	-0.696	2.814	0.14791	0.65377
RegionR4	-0.59	2.814	0.33957	0.65926
RegionR5	-0.035	2.814	0.92519	1.00000
RegionR6	-0.086	2.814	0.85461	1.00000
RegionR7	-0.457	2.814	0.54796	1.00000
RegionR8	1.18	2.814	0.11234	0.62046

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.131	2.814	0.21098	0.95060
RegenerationR2	0.236	2.814	0.60111	0.91602
RegenerationR3	-0.018	2.814	0.97364	1.00000
RegenerationR4	-0.334	2.814	0.56020	0.89690
RegenerationR5	-0.51	2.814	0.26629	0.69763
RegenerationR6	-0.125	2.814	0.82102	0.98731
RegenerationBL	0.4	2.814	0.53765	0.89702
RegenerationTP	-1.871	2.814	0.04749	0.35837

Genes with expression patterns similar to MligTC455_37697

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37697	237	4.94	Mlig455_001651	Neo: - Age: -	KMT5B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001651 {REF} {Length: 2806} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=35.3]} {Human: ENSG00000110066, KMT5B, lysine methyltransferase 5B, [RH, Score=239, Expect=2e-74]} {Mouse: ENSMUSG00000045098, Kmt5b, lysine methyltransferase 5B, [RH, Score=244, Expect=2e-72]} {Dmel: FBgn0025639, Hmt4-20, Histone methyltransferase 4-20, [RH, Score=248, Expect=1e-72]} {Celegans: WBGene00016313, set-4, Histone-lysine N-methyltransferase Suv4-20, [RH, Score=191, Expect=2e-57]} {Smed: dd_Smed_v6_11927_0_1, dd_Smed_v6_11927_0_1, [Score=224, Expect=3e-66]} {RNA1509_22106} {RNA1310_24481} {RNA815_15745}
2.	MligTC455_31226	113	2.36	Mlig455_065702	Neo: - Age: -		1.787	-	-	-	0.952	-	0.835	Mlig455_065702 {REF} {Length: 554} {NoTransDecoderORF} {RNA1509_60137} {RNA1310_20626} {RNA815_9142}
3.	MligTC455_24843	412	8.59	Mlig455_014713	Neo: - Age: - Region-enriched R8: 3.552/0.00000	TRPM1	1.694	-	0.723	-	-	0.971	-	Mlig455_014713 {REF} {Length: 8336} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=172.4]; Ankyrin repeats (many copies) [PF13637.8, score=126.4]; Ankyrin repeats (many copies) [PF13857.8, score=55.0]; Ankyrin repeat [PF13606.8, score=47.8]; Domain of unknown function (DUF4158) [PF13700.8, score=41.7]; Ankyrin repeat [PF00023.32, score=35.7]; RlmM ferredoxin-like domain [PF18125.3, score=24.8]; HMGL-like [PF00682.21, score=22.8]; Ion transport protein [PF00520.33, score=20.3]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=90.9, Expect=2e-17]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=90.9, Expect=2e-17]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=88.2, Expect=1e-16]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=91.7, Expect=8e-18]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=90.1, Expect=3e-17]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=73.2, Expect=2e-12]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=65.5, Expect=4e-10]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=116, Expect=5e-26]} {RNA1509_6015} {RNA1310_1769} {RNA815_7984}
4.	MligTC455_38285	105	2.19	Mlig455_040541	Neo: - Age: Up-Down-Up Region-enriched R2: 4.158/0.03152	REV3L	0.99	-	-	-	-	-	0.990	Mlig455_040541 {REF} {Length: 7335} {TRANSSPLICED} {Pfam: DNA polymerase family B [PF00136.23, score=288.6]; DNA polymerase family B, exonuclease domain [PF03104.21, score=71.6]; C4-type zinc-finger of DNA polymerase delta [PF14260.8, score=33.2]} {Human: ENSG00000009413, REV3L, REV3 like, DNA directed polymerase zeta catalytic subunit, [RH, Score=685, Expect=0.0]} {Mouse: ENSMUSG00000019841, Rev3l, REV3 like, DNA directed polymerase zeta catalytic subunit, [RH, Score=683, Expect=0.0]} {Dmel: FBgn0002891, mus205, mutagen-sensitive 205, [RH, Score=617, Expect=0.0]} {Celegans: WBGene00021344, Y37B11A.2, DNA polymerase, [RH, Score=389, Expect=5e-112]} {Smed: dd_Smed_v6_6426_0_2, dd_Smed_v6_6426_0_2, [RH, Score=675, Expect=0.0]} {RNA1509_28634} {RNA1310_16343.1, RNA1509_28634} {RNA1509_28634, RNA815_39669}
5.	MligTC455_19313	196	4.08	Mlig455_030602	Neo: - Age: Up-Down-Up	ANK1	0.975	-	-	-	0.975	-	-	Mlig455_030602 {REF} {Length: 5400} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=318.6]; Ankyrin repeat [PF00023.32, score=236.6]; Ankyrin repeats (many copies) [PF13637.8, score=217.8]; Ankyrin repeat [PF13606.8, score=217.0]; Ankyrin repeats (many copies) [PF13857.8, score=210.1]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=276, Expect=4e-75]; ENSG00000145362, ANK2, ankyrin 2, [Score=270, Expect=6e-73]; ENSG00000151150, ANK3, ankyrin 3, [Score=265, Expect=3e-71]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=268, Expect=2e-72]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=266, Expect=2e-72]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=263, Expect=6e-71]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=270, Expect=8e-73]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=253, Expect=6e-68]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=276, Expect=8e-78]} {RNA1509_11953, RNA1509_50434, RNA1509_59549, RNA1509_59927} {RNA1310_1362.1, RNA1509_11953, RNA1509_50434, RNA1509_59549, RNA1509_59927} {RNA1509_11953, RNA1509_50434, RNA1509_59549, RNA1509_59927, RNA815_444.1}
6.	MligTC455_35417	539	11.23	Mlig455_025920, Mlig455_025952	Neo: - Age: - Region-enriched R2: 3.849/0.00283		0.974	-	-	-	-	0.974	-	Mlig455_025920 {REF} {Length: 3607} {RNA1509_50554, RNA1509_8462} {RNA1310_23985, RNA1509_50554} {RNA1509_50554, RNA815_9218.1} Mlig455_025952 {REF} {Length: 3531} {RNA1509_48873, RNA1509_8462} {RNA1310_23985, RNA1509_48873} {RNA1509_48873, RNA815_9218.1}
7.	MligTC455_22562	62	1.28	Mlig455_004519	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_004519 {REF} {Length: 131} {NoTransDecoderORF} {RNA1310_25912.1} {RNA815_57017}
8.	MligTC455_31947	130	2.71	Mlig455_027667	Neo: Int S/G2/M Age: -		0.961	-	-	-	-	0.961	-	Mlig455_027667 {REF} {Length: 3211} {TRANSSPLICED} {RNA1509_21281} {RNA1310_16403.1} {RNA815_2223.1}
9.	MligTC455_34795	776	16.16	Mlig455_013273	Neo: - Age: -	PRKAG1	0.96	-	-	-	-	0.960	-	Mlig455_013273 {REF} {Length: 4790} {Pfam: CBS domain [PF00571.30, score=107.2]} {Human: ENSG00000181929, PRKAG1, protein kinase AMP-activated non-catalytic subunit gamma 1, [RH, Score=385, Expect=1e-128]; ENSG00000106617, PRKAG2, protein kinase AMP-activated non-catalytic subunit gamma 2, [RH, Score=369, Expect=6e-119]} {Mouse: ENSMUSG00000067713, Prkag1, protein kinase, AMP-activated, gamma 1 non-catalytic subunit, [RH, Score=384, Expect=5e-128]; ENSMUSG00000028944, Prkag2, protein kinase, AMP-activated, gamma 2 non-catalytic subunit, [RH, Score=370, Expect=3e-119]} {Dmel: FBgn0264357, SNF4Agamma, SNF4/AMP-activated protein kinase gamma subunit, [RH, Score=397, Expect=3e-122]} {Celegans: WBGene00013732, aakg-1, AMP-Activated protein Kinase Gamma subunit, [RH, Score=340, Expect=2e-105]} {Smed: dd_Smed_v6_4877_0_1, dd_Smed_v6_4877_0_1, [RH, Score=305, Expect=2e-97]} {RNA1509_9777} {RNA1310_4569, RNA1509_9777} {RNA1509_9777, RNA815_2038.1}
10.	MligTC455_17303	318	6.62	Mlig455_068164	Neo: - Age: -	TDG	0.959	-	-	-	-	0.959	-	Mlig455_068164 {REF} {Length: 7284} {TRANSSPLICED} {Pfam: Uracil DNA glycosylase superfamily [PF03167.21, score=132.9]} {Human: ENSG00000139372, TDG, thymine DNA glycosylase, [RH, Score=206, Expect=2e-57]} {Mouse: ENSMUSG00000034674, Tdg, thymine DNA glycosylase, [RH, Score=208, Expect=2e-58]} {Dmel: FBgn0026869, Thd1, [Score=253, Expect=7e-68]} {Smed: dd_Smed_v6_9424_0_1, dd_Smed_v6_9424_0_1, [Score=324, Expect=2e-97]} {RNA1509_28066} {RNA1310_15535} {RNA815_10224}
11.	MligTC455_21096	421	8.77	Mlig455_014961	Neo: Int S/G2/M Age: Up-Down-Down	BTBD2	0.958	-	-	-	-	0.958	-	Mlig455_014961 {REF} {Length: 2694} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF00651.33, score=87.1]; BTB And C-terminal Kelch [PF07707.17, score=22.2]} {Human: ENSG00000133243, BTBD2, BTB domain containing 2, [Score=105, Expect=1e-23]; ENSG00000064726, BTBD1, BTB domain containing 1, [Score=102, Expect=5e-23]} {Mouse: ENSMUSG00000003344, Btbd2, BTB (POZ) domain containing 2, [Score=104, Expect=1e-23]; ENSMUSG00000025103, Btbd1, BTB (POZ) domain containing 1, [Score=100, Expect=2e-22]} {Dmel: FBgn0262871, lute, [Score=89.7, Expect=9e-19]} {Celegans: WBGene00006415, tag-30, [Score=90.9, Expect=3e-19]} {Smed: dd_Smed_v6_7778_0_1, dd_Smed_v6_7778_0_1, [Score=64.7, Expect=4e-11]} {RNA1509_25011, RNA1509_33923, RNA1509_53477, RNA1509_58365} {RNA1310_22545, RNA1509_25011, RNA1509_53477, RNA1509_58365} {RNA1509_25011, RNA1509_53477, RNA1509_58365, RNA815_19917}
12.	MligTC455_51066	526	10.97	Mlig455_044665, Mlig455_044724	Neo: - Age: Down-Up-Down Region-enriched R8: 5.381/0.00000		0.958	-	-	-	-	0.958	-	Mlig455_044665 {REF} {Length: 1268} {Smed: dd_Smed_v6_7581_0_1, dd_Smed_v6_7581_0_1, [Score=148, Expect=3e-41]} {RNA1310_47069.2} {RNA815_30975} Mlig455_044724 {REF} {Length: 1327} {Smed: dd_Smed_v6_7581_0_1, dd_Smed_v6_7581_0_1, [Score=148, Expect=3e-41]} {RNA1310_47069.2} {RNA815_30975}
13.	MligTC455_52845	257	5.35	Mlig455_026037	Neo: Int S/G2/M Age: -	PHF12	0.957	-	-	-	-	0.957	-	Mlig455_026037 {REF} {Length: 2833} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=51.8]} {Human: ENSG00000109118, PHF12, PHD finger protein 12, [Score=92.4, Expect=6e-19]} {Mouse: ENSMUSG00000037791, Phf12, PHD finger protein 12, [Score=91.7, Expect=6e-19]} {Dmel: FBgn0029861, CG3815, [Score=103, Expect=7e-23]} {Celegans: WBGene00008081, athp-1, AT Hook plus PHD finger transcription factor, [Score=70.1, Expect=3e-12]} {Smed: dd_Smed_v6_11130_0_1, dd_Smed_v6_11130_0_1, [Score=137, Expect=3e-34]} {RNA1509_39252} {RNA1310_6431} {RNA815_9255}
14.	MligTC455_32460	777	16.19	Mlig455_012616	Neo: - Age: logFC(26M/2M)=0.288	BLVRB	0.956	-	-	-	-	0.956	-	Mlig455_012616 {REF} {Length: 2230} {TRANSSPLICED} {Pfam: NAD(P)H-binding [PF13460.8, score=113.9]; NmrA-like family [PF05368.15, score=40.8]; Semialdehyde dehydrogenase, NAD binding domain [PF01118.26, score=19.1]} {Human: ENSG00000090013, BLVRB, biliverdin reductase B, [Score=59.7, Expect=2e-10]} {Mouse: ENSMUSG00000040466, Blvrb, biliverdin reductase B (flavin reductase (NADPH)), [RH, Score=62.4, Expect=1e-11]} {RNA1509_43611} {RNA1310_49378} {RNA815_25402}
15.	MligTC455_31251	13	0.26	Mlig455_044314	Neo: Irradiation Age: -	GABBR2	0.954	-	-	-	-	0.954	-	Mlig455_044314 {REF} {Length: 2984} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=134.4]; Receptor family ligand binding region [PF01094.30, score=96.6]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=165, Expect=5e-41]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=164, Expect=5e-41]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=157, Expect=6e-39]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=140, Expect=5e-34]} {Smed: dd_Smed_v6_59890_0_1, dd_Smed_v6_59890_0_1, [Score=78.2, Expect=2e-16]} {RNA1509_26993} {RNA1310_7927.1} {RNA815_4866.1}
16.	MligTC455_46587	295	6.15	Mlig455_010520	Neo: - Age: logFC(26M/2M)=-0.575		0.954	-	-	-	-	0.954	-	Mlig455_010520 {REF} {Length: 2372} {RNA1509_53624} {RNA1310_26047.1, RNA1509_53624} {RNA1509_53624, RNA815_690.1}
17.	MligTC455_48913	93	1.94	Mlig455_065333	Neo: - Age: -	GOLGA4	0.953	-	-	-	0.953	-	-	Mlig455_065333 {REF} {Length: 3230} {Pfam: GRIP domain [PF01465.22, score=35.0]} {Human: ENSG00000144674, GOLGA4, golgin A4, [RH, Score=69.7, Expect=7e-12]} {Mouse: ENSMUSG00000038708, Golga4, golgi autoantigen, golgin subfamily a, 4, [RH, Score=70.9, Expect=2e-12]} {Celegans: WBGene00010306, golg-4, GOLGi associated coiled-coil protein homolog, [RH, Score=71.6, Expect=7e-13]} {Smed: dd_Smed_v6_10306_0_1, dd_Smed_v6_10306_0_1, [Score=60.5, Expect=2e-09]} {RNA1509_19374} {RNA1310_3750.1, RNA1509_19374} {RNA1509_19374, RNA815_14892.1}
18.	MligTC455_08196	64	1.33	Mlig455_025661	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_025661 {REF} {Length: 2327} {TRANSSPLICED} {Pfam: SAM dependent carboxyl methyltransferase [PF03492.17, score=122.2]} {RNA1509_57863} {RNA1310_33171.1} {RNA815_29973}
19.	MligTC455_14622	59	1.23	Mlig455_012377, Mlig455_012796	Neo: - Age: Up-Down-Down	IRF2BP2	0.951	-	-	-	-	0.951	-	Mlig455_012377 {REF} {Length: 2731} {TRANSSPLICED} {Pfam: Interferon regulatory factor 2-binding protein zinc finger [PF11261.10, score=99.2]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.4]} {Human: ENSG00000168264, IRF2BP2, interferon regulatory factor 2 binding protein 2, [RH, Score=98.2, Expect=4e-21]; ENSG00000119669, IRF2BPL, interferon regulatory factor 2 binding protein like, [RH, Score=97.8, Expect=7e-21]; ENSG00000170604, IRF2BP1, interferon regulatory factor 2 binding protein 1, [RH, Score=94.4, Expect=7e-20]} {Mouse: ENSMUSG00000051495, Irf2bp2, interferon regulatory factor 2 binding protein 2, [RH, Score=98.2, Expect=3e-21]; ENSMUSG00000034168, Irf2bpl, interferon regulatory factor 2 binding protein-like, [RH, Score=97.8, Expect=5e-21]; ENSMUSG00000044030, Irf2bp1, interferon regulatory factor 2 binding protein 1, [RH, Score=94.7, Expect=4e-20]} {Dmel: FBgn0030400, CG11138, [RH, Score=103, Expect=5e-23]} {Celegans: WBGene00010867, tag-260, [RH, Score=102, Expect=5e-23]} {Smed: dd_Smed_v6_18245_0_1, dd_Smed_v6_18245_0_1, [RH, Score=183, Expect=8e-52]} {RNA1310_58279.1} {RNA815_43124} Mlig455_012796 {REF} {Length: 2721} {TRANSSPLICED} {Pfam: Interferon regulatory factor 2-binding protein zinc finger [PF11261.10, score=98.9]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.8]} {Human: ENSG00000168264, IRF2BP2, interferon regulatory factor 2 binding protein 2, [RH, Score=99.8, Expect=2e-21]; ENSG00000119669, IRF2BPL, interferon regulatory factor 2 binding protein like, [RH, Score=99.0, Expect=4e-21]; ENSG00000170604, IRF2BP1, interferon regulatory factor 2 binding protein 1, [RH, Score=95.1, Expect=5e-20]} {Mouse: ENSMUSG00000034168, Irf2bpl, interferon regulatory factor 2 binding protein-like, [RH, Score=99.4, Expect=2e-21]; ENSMUSG00000051495, Irf2bp2, interferon regulatory factor 2 binding protein 2, [RH, Score=99.4, Expect=1e-21]; ENSMUSG00000044030, Irf2bp1, interferon regulatory factor 2 binding protein 1, [RH, Score=95.5, Expect=3e-20]} {Dmel: FBgn0030400, CG11138, [RH, Score=103, Expect=3e-23]} {Celegans: WBGene00010867, tag-260, [RH, Score=103, Expect=2e-23]} {Smed: dd_Smed_v6_18245_0_1, dd_Smed_v6_18245_0_1, [RH, Score=189, Expect=2e-53]} {RNA1310_60081} {RNA815_43124}
20.	MligTC455_13723	13	0.28	Mlig455_041223	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_041223 {REF} {Length: 2128} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=45.3]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=32.9]} {Smed: dd_Smed_v6_14726_0_1, dd_Smed_v6_14726_0_1, [Score=85.9, Expect=1e-18]} {RNA1310_95524.1} {RNA815_48018}