TomoSeq data search

Data search

Results for MligTC455_37742

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37742	2560	53.33	Mlig455_024881, Mlig455_068446, Mlig455_068447	Neo: - Age: -	CNOT6	Mlig455_024881 {REF} {Length: 3804} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=76.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=47.2]; Leucine rich repeat [PF13855.8, score=44.9]} {Human: ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [RH, Score=462, Expect=1e-157]; ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [RH, Score=448, Expect=4e-152]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [RH, Score=468, Expect=5e-160]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [RH, Score=462, Expect=1e-157]} {Dmel: FBgn0011725, twin, [RH, Score=499, Expect=2e-172]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [RH, Score=461, Expect=1e-156]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=444, Expect=1e-150]} {RNA1509_29336, RNA1509_4570} {RNA1310_13020, RNA1509_29336, RNA1509_4570} {RNA1509_29336, RNA1509_4570, RNA815_3688} Mlig455_068446 {REF} {Length: 3507} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=76.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=40.4]; Leucine rich repeat [PF13855.8, score=28.7]} {Human: ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [Score=434, Expect=2e-147]; ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [Score=426, Expect=3e-144]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [Score=442, Expect=6e-151]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [Score=438, Expect=4e-149]} {Dmel: FBgn0011725, twin, [Score=462, Expect=6e-159]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [Score=434, Expect=4e-147]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=412, Expect=1e-138]} {RNA1509_27835, RNA1509_4570} {RNA1310_13020, RNA1509_27835} {RNA1509_27835, RNA815_3688} Mlig455_068447 {REF} {Length: 121} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_4570} {RNA1310_13020} {RNA815_3688}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37742

2560

53.33

Mlig455_024881, Mlig455_068446, Mlig455_068447

Neo: -

Age: -

CNOT6

Mlig455_024881 {REF} {Length: 3804} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=76.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=47.2]; Leucine rich repeat [PF13855.8, score=44.9]} {Human: ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [RH, Score=462, Expect=1e-157]; ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [RH, Score=448, Expect=4e-152]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [RH, Score=468, Expect=5e-160]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [RH, Score=462, Expect=1e-157]} {Dmel: FBgn0011725, twin, [RH, Score=499, Expect=2e-172]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [RH, Score=461, Expect=1e-156]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=444, Expect=1e-150]} {RNA1509_29336, RNA1509_4570} {RNA1310_13020, RNA1509_29336, RNA1509_4570} {RNA1509_29336, RNA1509_4570, RNA815_3688}

Mlig455_068446 {REF} {Length: 3507} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=76.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=40.4]; Leucine rich repeat [PF13855.8, score=28.7]} {Human: ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [Score=434, Expect=2e-147]; ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [Score=426, Expect=3e-144]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [Score=442, Expect=6e-151]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [Score=438, Expect=4e-149]} {Dmel: FBgn0011725, twin, [Score=462, Expect=6e-159]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [Score=434, Expect=4e-147]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=412, Expect=1e-138]} {RNA1509_27835, RNA1509_4570} {RNA1310_13020, RNA1509_27835} {RNA1509_27835, RNA815_3688}

Mlig455_068447 {REF} {Length: 121} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_4570} {RNA1310_13020} {RNA815_3688}

Cumulative graph for MligTC455_37742

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.851	5.883	0.20942	0.84916
RegionR2	-0.301	5.883	0.29277	0.68107
RegionR3	-0.105	5.883	0.66336	1.00000
RegionR4	0.349	5.883	0.22419	0.51522
RegionR5	0.164	5.883	0.47089	0.83355
RegionR6	-0.118	5.883	0.63064	1.00000
RegionR7	0.395	5.883	0.15477	0.72756
RegionR8	0.468	5.883	0.16443	0.73354

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.399	5.883	0.69660	1.00000
RegenerationR2	0.025	5.883	0.92140	1.00000
RegenerationR3	-0.18	5.883	0.51757	0.86539
RegenerationR4	-0.019	5.883	0.94630	1.00000
RegenerationR5	-0.007	5.883	0.97896	1.00000
RegenerationR6	0.405	5.883	0.14779	0.47096
RegenerationBL	0.015	5.883	0.95943	1.00000
RegenerationTP	-0.087	5.883	0.77695	1.00000

Genes with expression patterns similar to MligTC455_37742

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37742	2560	53.33	Mlig455_024881, Mlig455_068446, Mlig455_068447	Neo: - Age: -	CNOT6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024881 {REF} {Length: 3804} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=76.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=47.2]; Leucine rich repeat [PF13855.8, score=44.9]} {Human: ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [RH, Score=462, Expect=1e-157]; ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [RH, Score=448, Expect=4e-152]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [RH, Score=468, Expect=5e-160]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [RH, Score=462, Expect=1e-157]} {Dmel: FBgn0011725, twin, [RH, Score=499, Expect=2e-172]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [RH, Score=461, Expect=1e-156]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=444, Expect=1e-150]} {RNA1509_29336, RNA1509_4570} {RNA1310_13020, RNA1509_29336, RNA1509_4570} {RNA1509_29336, RNA1509_4570, RNA815_3688} Mlig455_068446 {REF} {Length: 3507} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=76.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=40.4]; Leucine rich repeat [PF13855.8, score=28.7]} {Human: ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [Score=434, Expect=2e-147]; ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [Score=426, Expect=3e-144]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [Score=442, Expect=6e-151]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [Score=438, Expect=4e-149]} {Dmel: FBgn0011725, twin, [Score=462, Expect=6e-159]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [Score=434, Expect=4e-147]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=412, Expect=1e-138]} {RNA1509_27835, RNA1509_4570} {RNA1310_13020, RNA1509_27835} {RNA1509_27835, RNA815_3688} Mlig455_068447 {REF} {Length: 121} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_4570} {RNA1310_13020} {RNA815_3688}
2.	MligTC455_39597	1580	32.92	Mlig455_039163	Neo: - Age: -	SRSF10	1.66	-	-	0.956	-	-	0.704	Mlig455_039163 {REF} {Length: 2049} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=66.5]} {Human: ENSG00000188529, SRSF10, serine and arginine rich splicing factor 10, [RH, Score=89.7, Expect=2e-20]} {Mouse: ENSMUSG00000028676, Srsf10, serine/arginine-rich splicing factor 10, [RH, Score=89.7, Expect=1e-20]; ENSMUSG00000054679, Srsf12, serine/arginine-rich splicing factor 12, [RH, Score=88.6, Expect=3e-20]} {Dmel: FBgn0263829, CG34334, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00004387, rnp-4, RNA-binding protein 8A, [Score=65.1, Expect=5e-13]} {Smed: dd_Smed_v6_661_0_6, dd_Smed_v6_661_0_6, [RH, Score=102, Expect=1e-27]} {RNA1509_16371, RNA1509_1745, RNA1509_26324, RNA1509_30864} {RNA1310_13715.1, RNA1509_16371, RNA1509_26324, RNA1509_30864} {RNA1509_16371, RNA1509_26324, RNA1509_30864, RNA815_18153}
3.	MligTC455_16699	1171	24.39	Mlig455_019734	Neo: - Age: Up-Down-Down		0.964	-	-	-	-	0.964	-	Mlig455_019734 {REF} {Length: 4363} {Pfam: CUB domain [PF00431.22, score=71.1]; CUB-like domain [PF02408.22, score=21.7]} {RNA1509_15819, RNA1509_4029} {RNA1310_3344.1, RNA1509_15819, RNA1509_4029} {RNA1509_15819, RNA1509_4029, RNA815_829}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_37742

2560

53.33

Mlig455_024881, Mlig455_068446, Mlig455_068447

Neo: -

Age: -

CNOT6

1.000

Mlig455_068447 {REF} {Length: 121} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_4570} {RNA1310_13020} {RNA815_3688}

MligTC455_39597

1580

32.92

Mlig455_039163

Neo: -

Age: -

SRSF10

1.66

0.956

0.704

Mlig455_039163 {REF} {Length: 2049} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=66.5]} {Human: ENSG00000188529, SRSF10, serine and arginine rich splicing factor 10, [RH, Score=89.7, Expect=2e-20]} {Mouse: ENSMUSG00000028676, Srsf10, serine/arginine-rich splicing factor 10, [RH, Score=89.7, Expect=1e-20]; ENSMUSG00000054679, Srsf12, serine/arginine-rich splicing factor 12, [RH, Score=88.6, Expect=3e-20]} {Dmel: FBgn0263829, CG34334, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00004387, rnp-4, RNA-binding protein 8A, [Score=65.1, Expect=5e-13]} {Smed: dd_Smed_v6_661_0_6, dd_Smed_v6_661_0_6, [RH, Score=102, Expect=1e-27]} {RNA1509_16371, RNA1509_1745, RNA1509_26324, RNA1509_30864} {RNA1310_13715.1, RNA1509_16371, RNA1509_26324, RNA1509_30864} {RNA1509_16371, RNA1509_26324, RNA1509_30864, RNA815_18153}

MligTC455_16699

1171

24.39

Mlig455_019734

Neo: -

Age: Up-Down-Down

0.964

Mlig455_019734 {REF} {Length: 4363} {Pfam: CUB domain [PF00431.22, score=71.1]; CUB-like domain [PF02408.22, score=21.7]} {RNA1509_15819, RNA1509_4029} {RNA1310_3344.1, RNA1509_15819, RNA1509_4029} {RNA1509_15819, RNA1509_4029, RNA815_829}