Data search
Results for MligTC455_39597
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39597 | 1580 | 32.92 | Mlig455_039163 | Neo: - Age: - |
SRSF10 | Mlig455_039163 {REF} {Length: 2049} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=66.5]} {Human: ENSG00000188529, SRSF10, serine and arginine rich splicing factor 10, [RH, Score=89.7, Expect=2e-20]} {Mouse: ENSMUSG00000028676, Srsf10, serine/arginine-rich splicing factor 10, [RH, Score=89.7, Expect=1e-20]; ENSMUSG00000054679, Srsf12, serine/arginine-rich splicing factor 12, [RH, Score=88.6, Expect=3e-20]} {Dmel: FBgn0263829, CG34334, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00004387, rnp-4, RNA-binding protein 8A, [Score=65.1, Expect=5e-13]} {Smed: dd_Smed_v6_661_0_6, dd_Smed_v6_661_0_6, [RH, Score=102, Expect=1e-27]} {RNA1509_16371, RNA1509_1745, RNA1509_26324, RNA1509_30864} {RNA1310_13715.1, RNA1509_16371, RNA1509_26324, RNA1509_30864} {RNA1509_16371, RNA1509_26324, RNA1509_30864, RNA815_18153} |
Cumulative graph for MligTC455_39597
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.735 | 5.261 | 0.36199 | 1.00000 | |
| RegionR2 | -0.23 | 5.261 | 0.50103 | 0.88054 | |
| RegionR3 | -0.104 | 5.261 | 0.71184 | 1.00000 | |
| RegionR4 | 0.404 | 5.261 | 0.20648 | 0.48916 | |
| RegionR5 | 0.027 | 5.261 | 0.91530 | 1.00000 | |
| RegionR6 | 0.018 | 5.261 | 0.94713 | 1.00000 | |
| RegionR7 | 0.313 | 5.261 | 0.34515 | 0.98232 | |
| RegionR8 | 0.307 | 5.261 | 0.45080 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.529 | 5.261 | 0.32079 | 1.00000 | |
| RegenerationR2 | 0.292 | 5.261 | 0.31443 | 0.75344 | |
| RegenerationR3 | 0.107 | 5.261 | 0.73766 | 0.95994 | |
| RegenerationR4 | 0.029 | 5.261 | 0.92836 | 1.00000 | |
| RegenerationR5 | 0.385 | 5.261 | 0.20139 | 0.63370 | |
| RegenerationR6 | 0.211 | 5.261 | 0.51077 | 0.81381 | |
| RegenerationBL | 0.382 | 5.261 | 0.25104 | 0.60725 | |
| RegenerationTP | 0.231 | 5.261 | 0.52605 | 0.91765 |
Genes with expression patterns similar to MligTC455_39597
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39597 | 1580 | 32.92 | Mlig455_039163 | Neo: - Age: - |
SRSF10 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_039163 {REF} {Length: 2049} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=66.5]} {Human: ENSG00000188529, SRSF10, serine and arginine rich splicing factor 10, [RH, Score=89.7, Expect=2e-20]} {Mouse: ENSMUSG00000028676, Srsf10, serine/arginine-rich splicing factor 10, [RH, Score=89.7, Expect=1e-20]; ENSMUSG00000054679, Srsf12, serine/arginine-rich splicing factor 12, [RH, Score=88.6, Expect=3e-20]} {Dmel: FBgn0263829, CG34334, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00004387, rnp-4, RNA-binding protein 8A, [Score=65.1, Expect=5e-13]} {Smed: dd_Smed_v6_661_0_6, dd_Smed_v6_661_0_6, [RH, Score=102, Expect=1e-27]} {RNA1509_16371, RNA1509_1745, RNA1509_26324, RNA1509_30864} {RNA1310_13715.1, RNA1509_16371, RNA1509_26324, RNA1509_30864} {RNA1509_16371, RNA1509_26324, RNA1509_30864, RNA815_18153} |
| 2. | MligTC455_04564 | 742 | 15.45 | Mlig455_038816 | Neo: - Age: Down-Up-Down |
GET4 | 1.715 | - | - | - | 0.957 | - | 0.758 | Mlig455_038816 {REF} {Length: 3703} {TRANSSPLICED} {Pfam: Golgi to ER traffic protein 4 [PF04190.15, score=170.8]} {Human: ENSG00000239857, GET4, golgi to ER traffic protein 4, [RH, Score=201, Expect=5e-62]} {Mouse: ENSMUSG00000025858, Get4, golgi to ER traffic protein 4, [RH, Score=186, Expect=2e-56]} {Dmel: FBgn0086605, CG9853, [RH, Score=145, Expect=6e-41]} {Smed: dd_Smed_v6_7734_0_1, dd_Smed_v6_7734_0_1, [RH, Score=169, Expect=4e-50]} {RNA1509_32148, RNA1509_54341} {RNA1310_28338.1, RNA1509_54341} {RNA1509_54341, RNA815_12431} |
| 3. | MligTC455_04563 | 750 | 15.62 | Mlig455_038799 | Neo: - Age: - |
1.713 | - | - | - | 0.953 | - | 0.760 | Mlig455_038799 {REF} {Length: 2039} {RNA1509_24595, RNA1509_54341} {RNA1310_59579, RNA1509_24595} {RNA1509_24595, RNA815_27833.1} | |
| 4. | MligTC455_43231 | 734 | 15.29 | Mlig455_034945 | Neo: - Age: - |
PAN3 | 1.713 | - | - | - | 0.965 | - | 0.748 | Mlig455_034945 {REF} {Length: 4166} {TRANSSPLICED} {Pfam: Pan3 Pseudokinase domain [PF18101.3, score=144.5]} {Human: ENSG00000152520, PAN3, poly(A) specific ribonuclease subunit PAN3, [Score=266, Expect=4e-79]} {Mouse: ENSMUSG00000029647, Pan3, PAN3 poly(A) specific ribonuclease subunit, [Score=267, Expect=2e-78]} {Dmel: FBgn0035397, CG11486, [Score=234, Expect=3e-67]} {Celegans: WBGene00014015, panl-3, PAB-dependent poly(A)-specific ribonuclease subunit PAN3, [Score=219, Expect=1e-62]} {Smed: dd_Smed_v6_4588_0_4, dd_Smed_v6_4588_0_4, [Score=301, Expect=1e-92]} {RNA1509_22307} {RNA1310_9893} {RNA815_9780} |
| 5. | MligTC455_37742 | 2560 | 53.33 | Mlig455_024881, Mlig455_068446, Mlig455_068447 | Neo: - Age: - |
CNOT6 | 1.66 | - | - | 0.956 | - | - | 0.704 | Mlig455_024881 {REF} {Length: 3804} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=76.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=47.2]; Leucine rich repeat [PF13855.8, score=44.9]} {Human: ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [RH, Score=462, Expect=1e-157]; ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [RH, Score=448, Expect=4e-152]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [RH, Score=468, Expect=5e-160]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [RH, Score=462, Expect=1e-157]} {Dmel: FBgn0011725, twin, [RH, Score=499, Expect=2e-172]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [RH, Score=461, Expect=1e-156]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=444, Expect=1e-150]} {RNA1509_29336, RNA1509_4570} {RNA1310_13020, RNA1509_29336, RNA1509_4570} {RNA1509_29336, RNA1509_4570, RNA815_3688} Mlig455_068446 {REF} {Length: 3507} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=76.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=40.4]; Leucine rich repeat [PF13855.8, score=28.7]} {Human: ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [Score=434, Expect=2e-147]; ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [Score=426, Expect=3e-144]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [Score=442, Expect=6e-151]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [Score=438, Expect=4e-149]} {Dmel: FBgn0011725, twin, [Score=462, Expect=6e-159]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [Score=434, Expect=4e-147]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=412, Expect=1e-138]} {RNA1509_27835, RNA1509_4570} {RNA1310_13020, RNA1509_27835} {RNA1509_27835, RNA815_3688} Mlig455_068447 {REF} {Length: 121} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_4570} {RNA1310_13020} {RNA815_3688} |
| 6. | MligTC455_51216 | 5475 | 114.05 | Mlig455_047550, Mlig455_069680 | Neo: - Age: Down-Down-Up |
LSAMP | 0.961 | - | - | - | - | - | 0.961 | Mlig455_047550 {REF} {Length: 2394} {Pfam: Immunoglobulin domain [PF13927.8, score=113.9]; Immunoglobulin domain [PF00047.27, score=86.0]; Immunoglobulin I-set domain [PF07679.18, score=78.9]; Immunoglobulin domain [PF13895.8, score=72.5]; Immunoglobulin V-set domain [PF07686.19, score=59.0]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=38.6]} {Human: ENSG00000185565, LSAMP, limbic system associated membrane protein, [Score=83.6, Expect=2e-17]; ENSG00000172260, NEGR1, neuronal growth regulator 1, [Score=82.4, Expect=9e-17]} {Mouse: ENSMUSG00000061080, Lsamp, limbic system-associated membrane protein, [Score=84.0, Expect=2e-17]; ENSMUSG00000040037, Negr1, neuronal growth regulator 1, [Score=83.2, Expect=3e-17]} {Dmel: FBgn0085382, CG34353, [Score=90.1, Expect=3e-19]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=60.5, Expect=1e-09]} {Smed: dd_Smed_v6_2826_0_1, dd_Smed_v6_2826_0_1, [RH, Score=225, Expect=1e-69]} {RNA1509_3076} {RNA1310_10384.1, RNA1509_3076} {RNA1509_3076, RNA815_3524.1} Mlig455_069680 {REF} {Length: 2760} {Pfam: Immunoglobulin domain [PF13927.8, score=113.9]; Immunoglobulin domain [PF00047.27, score=86.0]; Immunoglobulin I-set domain [PF07679.18, score=78.9]; Immunoglobulin domain [PF13895.8, score=72.5]; Immunoglobulin V-set domain [PF07686.19, score=59.0]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=38.6]} {Human: ENSG00000185565, LSAMP, limbic system associated membrane protein, [Score=83.6, Expect=2e-17]; ENSG00000172260, NEGR1, neuronal growth regulator 1, [Score=82.4, Expect=9e-17]} {Mouse: ENSMUSG00000061080, Lsamp, limbic system-associated membrane protein, [Score=84.0, Expect=2e-17]; ENSMUSG00000040037, Negr1, neuronal growth regulator 1, [Score=83.2, Expect=3e-17]} {Dmel: FBgn0085382, CG34353, [Score=90.1, Expect=3e-19]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=60.5, Expect=1e-09]} {Smed: dd_Smed_v6_2826_0_1, dd_Smed_v6_2826_0_1, [RH, Score=225, Expect=1e-69]} {RNA1509_3076, RNA1509_56669} {RNA1310_10384.2, RNA1509_56669} {RNA1509_56669, RNA815_3524.1} |
| 7. | MligTC455_46769 | 561 | 11.69 | Mlig455_016191 | Neo: - |
FAM76A | 0.96 | - | - | - | 0.960 | - | - | Mlig455_016191 {REF} {Length: 3032} {TRANSSPLICED} {Pfam: FAM76 protein [PF16046.7, score=150.4]} {Human: ENSG00000009780, FAM76A, family with sequence similarity 76 member A, [RH, Score=104, Expect=1e-24]} {Mouse: ENSMUSG00000037808, Fam76b, family with sequence similarity 76, member B, [RH, Score=108, Expect=6e-26]; ENSMUSG00000028878, Fam76a, family with sequence similarity 76, member A, [RH, Score=103, Expect=3e-24]} {Celegans: WBGene00019399, K04F10.7, [RH, Score=53.9, Expect=6e-08]} {Smed: dd_Smed_v6_6213_0_1, dd_Smed_v6_6213_0_1, [RH, Score=134, Expect=2e-35]} {RNA1509_24429, RNA1509_52669, RNA1509_54090} {RNA1310_21568.1, RNA1509_24429, RNA1509_52669, RNA1509_54090} {RNA1509_24429, RNA1509_52669, RNA1509_54090, RNA815_22662.1} |
| 8. | MligTC455_20926 | 159 | 3.31 | Mlig455_035457 | Neo: - Age: Up-Up-Down |
RGS7 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_035457 {REF} {Length: 4252} {TRANSSPLICED} {Pfam: Regulator of G-protein signalling DHEX domain [PF18148.3, score=111.2]; Regulator of G protein signaling domain [PF00615.21, score=96.8]; Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) [PF00610.23, score=52.4]; GGL domain [PF00631.24, score=47.5]} {Human: ENSG00000182901, RGS7, regulator of G protein signaling 7, [RH, Score=390, Expect=9e-131]; ENSG00000182732, RGS6, regulator of G protein signaling 6, [RH, Score=388, Expect=1e-129]} {Mouse: ENSMUSG00000021219, Rgs6, regulator of G-protein signaling 6, [RH, Score=390, Expect=1e-130]; ENSMUSG00000026527, Rgs7, regulator of G protein signaling 7, [RH, Score=387, Expect=1e-129]} {Dmel: FBgn0024941, RSG7, Regulator of G-protein signaling 7, [Score=436, Expect=1e-146]} {Celegans: WBGene00001179, egl-10, Regulator of G-protein signaling egl-10, [RH, Score=249, Expect=8e-75]} {Smed: dd_Smed_v6_4578_0_1, dd_Smed_v6_4578_0_1, [RH, Score=292, Expect=2e-91]} {RNA1509_36010, RNA1509_53691} {RNA1310_14952.1, RNA1509_36010, RNA1509_53691} {RNA1509_36010, RNA1509_53691, RNA815_22104.1} |
| 9. | MligTC455_54042 | 2887 | 60.14 | Mlig455_041408 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_041408 {REF} {Length: 1712} {RNA1509_51010} {RNA1310_22710} {RNA815_22172} | |
| 10. | MligTC455_46367 | 535 | 11.15 | Mlig455_066511 | Neo: - Age: logFC(26M/2M)=-0.381 |
0.954 | - | - | - | - | 0.954 | - | Mlig455_066511 {REF} {Length: 4295} {RNA1509_38263, RNA1509_51270} {RNA1310_46161.1, RNA1509_51270} {RNA1509_51270, RNA815_23835} | |
| 11. | MligTC455_45886 | 555 | 11.55 | Mlig455_006066, Mlig455_018152, Mlig455_068050 | Neo: Int S/G2/M Age: - Region-enriched R4: 2.002/0.01764 |
CLSPN | 0.952 | - | - | - | 0.952 | - | - | Mlig455_006066 {REF} {Length: 5198} {Human: ENSG00000092853, CLSPN, claspin, [RH, Score=69.3, Expect=4e-11]} {Mouse: ENSMUSG00000042489, Clspn, claspin, [RH, Score=64.3, Expect=9e-10]} {Celegans: WBGene00009127, clsp-1, CLaSPin homolog, [Score=50.4, Expect=8e-06]} {Smed: dd_Smed_v6_7575_0_1, dd_Smed_v6_7575_0_1, [RH, Score=55.8, Expect=8e-08]} {RNA1509_18102} {RNA1310_3790.1} {RNA815_2284.1} Mlig455_018152 {REF} {Length: 1976} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=188.5]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=75.1, Expect=1e-13]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=68.2, Expect=1e-11]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=94.4, Expect=4e-20]} Mlig455_068050 {REF} {Length: 5949} {TRANSSPLICED} {Human: ENSG00000092853, CLSPN, claspin, [RH, Score=68.9, Expect=5e-11]} {Mouse: ENSMUSG00000042489, Clspn, claspin, [RH, Score=64.3, Expect=8e-10]} {Smed: dd_Smed_v6_7575_0_1, dd_Smed_v6_7575_0_1, [RH, Score=55.8, Expect=8e-08]} {RNA1509_18102} {RNA1310_3790.1} {RNA815_2284.1} |