Data search
Results for MligTC455_37773
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_37773 | 356 | 7.41 | Mlig455_007672 | Neo: - Age: Down-Up-Down |
CCDC88C | Mlig455_007672 {REF} {Length: 3717} {Pfam: HOOK domain [PF19047.2, score=42.4]} {Human: ENSG00000015133, CCDC88C, coiled-coil domain containing 88C, [Score=83.6, Expect=9e-16]} {Mouse: ENSMUSG00000021182, Ccdc88c, coiled-coil domain containing 88C, [Score=89.0, Expect=1e-17]} {Smed: dd_Smed_v6_3591_0_1, dd_Smed_v6_3591_0_1, [Score=85.5, Expect=4e-17]} {RNA1509_24831} {RNA1310_4015.1, RNA1509_24831} {RNA1509_24831, RNA815_10694} |
Cumulative graph for MligTC455_37773
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.29 | 3.283 | 0.82813 | 1.00000 | |
| RegionR2 | 0.498 | 3.283 | 0.49492 | 0.87581 | |
| RegionR3 | -0.07 | 3.283 | 0.91250 | 1.00000 | |
| RegionR4 | -1.112 | 3.283 | 0.08729 | 0.28065 | |
| RegionR5 | 1.117 | 3.283 | 0.02253 | 0.10559 | |
| RegionR6 | 0.662 | 3.283 | 0.24702 | 0.83270 | |
| RegionR7 | 0.009 | 3.283 | 0.98837 | 1.00000 | |
| RegionR8 | -1.394 | 3.283 | 0.24800 | 0.86653 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.589 | 3.283 | 0.14596 | 0.88617 | |
| RegenerationR2 | 0.436 | 3.283 | 0.47342 | 0.85917 | |
| RegenerationR3 | 0.446 | 3.283 | 0.52029 | 0.86696 | |
| RegenerationR4 | 1.039 | 3.283 | 0.13197 | 0.54945 | |
| RegenerationR5 | -0.094 | 3.283 | 0.87323 | 1.00000 | |
| RegenerationR6 | 0.487 | 3.283 | 0.44685 | 0.76820 | |
| RegenerationBL | 0.012 | 3.283 | 0.98706 | 1.00000 | |
| RegenerationTP | 0.499 | 3.283 | 0.61996 | 0.97247 |
Genes with expression patterns similar to MligTC455_37773
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_37773 | 356 | 7.41 | Mlig455_007672 | Neo: - Age: Down-Up-Down |
CCDC88C | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007672 {REF} {Length: 3717} {Pfam: HOOK domain [PF19047.2, score=42.4]} {Human: ENSG00000015133, CCDC88C, coiled-coil domain containing 88C, [Score=83.6, Expect=9e-16]} {Mouse: ENSMUSG00000021182, Ccdc88c, coiled-coil domain containing 88C, [Score=89.0, Expect=1e-17]} {Smed: dd_Smed_v6_3591_0_1, dd_Smed_v6_3591_0_1, [Score=85.5, Expect=4e-17]} {RNA1509_24831} {RNA1310_4015.1, RNA1509_24831} {RNA1509_24831, RNA815_10694} |
| 2. | MligTC455_31129 | 1008 | 21 | Mlig455_005615, Mlig455_070184 | Neo: Irradiation Age: logFC(26M/2M)=0.545 Region-specific R5: 1.527 Region-enriched R5: 1.021/0.00725 |
LIG4 | 3.328 | 0.778 | - | - | 0.725 | 0.868 | 0.957 | Mlig455_005615 {REF} {Length: 3975} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=70.9]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.5]; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=57.1]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.4]; RNA ligase [PF09414.12, score=29.0]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.6]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [Score=546, Expect=2e-178]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [Score=541, Expect=7e-177]} {Dmel: FBgn0030506, Lig4, Ligase4, [Score=214, Expect=4e-57]} {Celegans: WBGene00002986, lig-4, LIGase, [RH, Score=127, Expect=1e-29]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [Score=504, Expect=6e-163]} {RNA1509_4940} {RNA1310_2815} {RNA815_3459} Mlig455_070184 {REF} {Length: 3787} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=120.6]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.6]; RNA ligase [PF09414.12, score=29.1]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.1]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [RH, Score=648, Expect=0.0]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0030506, Lig4, Ligase4, [RH, Score=253, Expect=3e-70]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=134, Expect=7e-32]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_4940} {RNA1310_2815, RNA1509_4940} {RNA1509_4940, RNA815_3459} |
| 3. | MligTC455_23989 | 1060 | 22.09 | Mlig455_040688, Mlig455_064558 | Neo: Int S/G2/M Age: - |
WEE2 | 1.807 | - | - | - | - | 0.967 | 0.840 | Mlig455_040688 {REF} {Length: 2318} {Pfam: Protein kinase domain [PF00069.27, score=106.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=79.2]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=22.9]} {Human: ENSG00000214102, WEE2, WEE1 homolog 2, [Score=106, Expect=1e-23]; ENSG00000263042, WEE2, WEE1 homolog 2, [Score=106, Expect=1e-23]} {Mouse: ENSMUSG00000037159, Wee2, WEE1 homolog 2 (S. pombe), [Score=111, Expect=2e-25]} {Dmel: FBgn0011737, Wee1, Wee1 kinase, [RH, Score=114, Expect=1e-26]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=72.0, Expect=6e-13]} {Smed: dd_Smed_v6_17244_0_1, dd_Smed_v6_17244_0_1, [RH, Score=95.9, Expect=6e-21]} {RNA1509_34481} {RNA1310_10526} {RNA815_4229.1} Mlig455_064558 {REF} {Length: 2345} {Pfam: Protein kinase domain [PF00069.27, score=105.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=79.2]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=22.8]} {Human: ENSG00000263042, WEE2, WEE1 homolog 2, [Score=106, Expect=1e-23]; ENSG00000214102, WEE2, WEE1 homolog 2, [Score=106, Expect=1e-23]} {Mouse: ENSMUSG00000037159, Wee2, WEE1 homolog 2 (S. pombe), [Score=111, Expect=2e-25]} {Dmel: FBgn0011737, Wee1, Wee1 kinase, [RH, Score=114, Expect=1e-26]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=72.8, Expect=4e-13]} {Smed: dd_Smed_v6_17244_0_1, dd_Smed_v6_17244_0_1, [RH, Score=95.9, Expect=6e-21]} {RNA1509_34481} {RNA1310_10526, RNA1509_34481} {RNA1509_34481, RNA815_4229.1} |
| 4. | MligTC455_38663 | 167 | 3.48 | Mlig455_052271 | Neo: Irradiation Age: - Region-enriched R5: 2.290/0.00113 |
SLC4A1AP | 1.768 | - | - | - | 0.810 | - | 0.958 | Mlig455_052271 {REF} {Length: 3080} {Pfam: FHA domain [PF00498.28, score=67.2]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=28.3]; Dicer dimerisation domain [PF03368.16, score=21.1]} {Human: ENSG00000163798, SLC4A1AP, solute carrier family 4 member 1 adaptor protein, [RH, Score=259, Expect=4e-75]} {Mouse: ENSMUSG00000029141, Slc4a1ap, solute carrier family 4 (anion exchanger), member 1, adaptor protein, [RH, Score=250, Expect=1e-71]} {Dmel: FBgn0038640, CG7706, [RH, Score=223, Expect=2e-62]} {Celegans: WBGene00014011, ZK632.2, [RH, Score=170, Expect=4e-44]} {Smed: dd_Smed_v6_8435_0_1, dd_Smed_v6_8435_0_1, [RH, Score=275, Expect=2e-82]} {RNA1509_15385, RNA1509_42540} {RNA1310_8436, RNA1509_42540} {RNA1509_42540, RNA815_10628} |
| 5. | MligTC455_18854 | 488 | 10.16 | Mlig455_037916, Mlig455_038991 | Neo: - Age: Down-Up-Down |
C17orf53 | 1.761 | - | - | - | - | 0.808 | 0.953 | Mlig455_037916 {REF} {Length: 2009} {TRANSSPLICED} {Pfam: Homologous recombination OB-fold protein [PF15072.8, score=78.5]} {Human: ENSG00000125319, C17orf53, chromosome 17 open reading frame 53, [RH, Score=108, Expect=3e-24]} {Mouse: ENSMUSG00000034773, BC030867, cDNA sequence BC030867, [RH, Score=102, Expect=1e-22]} {Smed: dd_Smed_v6_13184_0_1, dd_Smed_v6_13184_0_1, [RH, Score=88.2, Expect=1e-18]} {RNA1509_35869} {RNA1310_12327.1} {RNA815_29097} Mlig455_038991 {REF} {Length: 2163} {TRANSSPLICED} {Pfam: Homologous recombination OB-fold protein [PF15072.8, score=78.2]} {Human: ENSG00000125319, C17orf53, chromosome 17 open reading frame 53, [RH, Score=107, Expect=1e-23]} {Mouse: ENSMUSG00000034773, BC030867, cDNA sequence BC030867, [Score=101, Expect=5e-22]} {Smed: dd_Smed_v6_13184_0_1, dd_Smed_v6_13184_0_1, [RH, Score=86.3, Expect=8e-18]} {RNA1509_35869} {RNA1310_12327.1, RNA1509_35869} {RNA1509_35869, RNA815_29097} |
| 6. | MligTC455_26316 | 223 | 4.65 | Mlig455_026855 | Neo: - Age: Down-Down-Up |
TTC13 | 1.711 | 0.746 | - | - | - | - | 0.965 | Mlig455_026855 {REF} {Length: 3232} {Human: ENSG00000143643, TTC13, tetratricopeptide repeat domain 13, [Score=218, Expect=5e-62]} {Mouse: ENSMUSG00000037300, Ttc13, tetratricopeptide repeat domain 13, [RH, Score=221, Expect=2e-63]} {RNA1509_23308} {RNA1310_3288} {RNA815_7870} |
| 7. | MligTC455_52227 | 303 | 6.32 | Mlig455_060574 | Neo: - Age: - |
MAPK10 | 1.679 | - | - | - | - | 0.729 | 0.950 | Mlig455_060574 {REF} {Length: 2333} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=202.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.0]; ABC1 atypical kinase-like domain [PF03109.18, score=23.3]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.1]} {Human: ENSG00000109339, MAPK10, mitogen-activated protein kinase 10, [RH, Score=588, Expect=0.0]; ENSG00000107643, MAPK8, mitogen-activated protein kinase 8, [RH, Score=579, Expect=0.0]} {Mouse: ENSMUSG00000046709, Mapk10, mitogen-activated protein kinase 10, [RH, Score=588, Expect=0.0]; ENSMUSG00000021936, Mapk8, mitogen-activated protein kinase 8, [RH, Score=579, Expect=0.0]} {Dmel: FBgn0000229, bsk, basket, [RH, Score=580, Expect=0.0]} {Celegans: WBGene00002178, jnk-1, Stress-activated protein kinase jnk-1, [RH, Score=546, Expect=0.0]} {Smed: dd_Smed_v6_5924_0_1, dd_Smed_v6_5924_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_19128, RNA1509_32566} {RNA1310_10146, RNA1509_19128, RNA1509_32566} {RNA1509_19128, RNA1509_32566, RNA815_12041} |
| 8. | MligTC455_42795 | 694 | 14.47 | Mlig455_007126 | Neo: Irradiation Age: - Region-enriched R5: 1.805/0.00044 |
POLR3C | 1.678 | - | - | - | 0.723 | 0.955 | - | Mlig455_007126 {REF} {Length: 2156} {Pfam: RNA polymerase III subunit RPC82 [PF05645.15, score=24.7]; TFIIE alpha subunit [PF02002.19, score=19.0]} {Human: ENSG00000186141, POLR3C, RNA polymerase III subunit C, [RH, Score=180, Expect=8e-49]} {Mouse: ENSMUSG00000028099, Polr3c, polymerase (RNA) III (DNA directed) polypeptide C, [RH, Score=183, Expect=4e-50]} {Dmel: FBgn0038057, CG12267, [RH, Score=105, Expect=9e-24]} {RNA1509_8125} {RNA1310_9635.1, RNA1509_8125} {RNA1509_8125, RNA815_3590.1} |
| 9. | MligTC455_34199 | 913 | 19.03 | Mlig455_063066 | Neo: - Age: - Region-enriched R5: 1.587/0.00005 |
0.967 | - | - | - | - | - | 0.967 | Mlig455_063066 {REF} {Length: 2172} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=47.3]; RING-H2 zinc finger domain [PF12678.9, score=33.9]; zinc-RING finger domain [PF14634.8, score=33.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=29.8]; RING-type zinc-finger [PF13445.8, score=28.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.5]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=27.3]; Zinc-ribbon, C4HC2 type [PF17120.7, score=23.7]; RING-like zinc finger [PF17123.7, score=23.3]; RING/Ubox like zinc-binding domain [PF14570.8, score=20.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.4]; Rtf2 RING-finger [PF04641.14, score=18.3]} {Smed: dd_Smed_v6_15562_0_1, dd_Smed_v6_15562_0_1, [Score=50.8, Expect=1e-07]} {RNA1509_13738} {RNA1310_23650, RNA1509_13738} {RNA1509_13738, RNA815_24579} | |
| 10. | MligTC455_25048 | 94 | 1.96 | Mlig455_041230 | Neo: - Age: - Region-enriched R5: 2.308/0.04470 |
0.966 | - | - | - | - | - | 0.966 | Mlig455_041230 {REF} {Length: 530} {NoTransDecoderORF} {RNA1310_63225} {RNA815_30268} | |
| 11. | MligTC455_36146 | 388 | 8.09 | Mlig455_034256 | Neo: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_034256 {REF} {Length: 3287} {RNA1509_54264} {RNA1310_5666.1} {RNA815_1552} | |
| 12. | MligTC455_36147 | 389 | 8.1 | Mlig455_034292 | Neo: - Age: Down-Down-Up |
0.955 | - | - | - | 0.955 | - | - | Mlig455_034292 {REF} {Length: 3165} {RNA1509_54264} {RNA1310_5666.1} {RNA815_1552} | |
| 13. | MligTC455_19375 | 387 | 8.07 | Mlig455_062098 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.131/0.01615 |
FTH1 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_062098 {REF} {Length: 1760} {TRANSSPLICED} {Pfam: Ferritin-like domain [PF00210.26, score=67.1]} {Human: ENSG00000167996, FTH1, ferritin heavy chain 1, [Score=104, Expect=2e-26]; ENSG00000181867, FTMT, ferritin mitochondrial, [Score=101, Expect=1e-24]} {Mouse: ENSMUSG00000024510, Ftmt, ferritin mitochondrial, [Score=103, Expect=9e-26]; ENSMUSG00000024661, Fth1, ferritin heavy polypeptide 1, [Score=102, Expect=9e-26]; ENSMUSG00000050708, Ftl1, ferritin light polypeptide 1, [Score=98.2, Expect=4e-24]; ENSMUSG00000062382, Ftl1-ps1, ferritin light polypeptide 1, pseudogene 1, [Score=98.2, Expect=4e-24]} {Dmel: FBgn0030449, Fer3HCH, Ferritin 3 heavy chain homologue, [Score=101, Expect=1e-25]} {Celegans: WBGene00001501, ftn-2, Ferritin, [Score=114, Expect=2e-30]} {Smed: dd_Smed_v6_3974_0_1, dd_Smed_v6_3974_0_1, [Score=119, Expect=1e-32]} {RNA1509_11155, RNA1509_49596, RNA1509_56345} {RNA1310_7838.2, RNA1509_11155, RNA1509_49596, RNA1509_56345} {RNA1509_11155, RNA1509_49596, RNA1509_56345, RNA815_11192} |
| 14. | MligTC455_49118 | 336 | 7 | Mlig455_069204 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 1.588/0.00381 |
MCMBP | 0.95 | - | - | - | - | - | 0.950 | Mlig455_069204 {REF} {Length: 3241} {TRANSSPLICED} {Pfam: Mini-chromosome maintenance replisome factor [PF09739.11, score=310.6]} {Human: ENSG00000197771, MCMBP, minichromosome maintenance complex binding protein, [RH, Score=203, Expect=3e-56]} {Mouse: ENSMUSG00000048170, Mcmbp, minichromosome maintenance complex binding protein, [RH, Score=203, Expect=2e-56]} {Dmel: FBgn0031875, CG3430, [RH, Score=186, Expect=1e-50]} {RNA1509_12390} {RNA1310_5415} {RNA815_3040} |