Data search
Results for MligTC455_37778
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_37778 | 1051 | 21.89 | Mlig455_036726 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.197/0.00011 |
Mlig455_036726 {REF} {Length: 681} {TRANSSPLICED} {Pfam: Hypoxia induced protein conserved region [PF04588.15, score=26.0]} {Mouse: ENSMUSG00000038412, Higd1a, HIG1 domain family, member 1A, [RH, Score=50.4, Expect=1e-08]} {Smed: dd_Smed_v6_417_1_1, dd_Smed_v6_417_1_1, [RH, Score=58.9, Expect=2e-12]} {RNA1509_55075, RNA1509_9993} {RNA1310_51983, RNA1509_55075, RNA1509_9993} {RNA1509_55075, RNA1509_9993, RNA815_27082} |
Cumulative graph for MligTC455_37778
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.772 | 4.724 | 0.34098 | 0.98566 | |
| RegionR2 | -0.102 | 4.724 | 0.78157 | 1.00000 | |
| RegionR3 | 0.031 | 4.724 | 0.91477 | 1.00000 | |
| RegionR4 | 1.171 | 4.724 | 0.00026 | 0.00353 | |
| RegionR5 | 1.197 | 4.724 | 0.00000 | 0.00011 | |
| RegionR6 | 0.459 | 4.724 | 0.12885 | 0.64911 | |
| RegionR7 | -0.542 | 4.724 | 0.19182 | 0.79673 | |
| RegionR8 | -1.442 | 4.724 | 0.00980 | 0.18647 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.809 | 4.724 | 0.02488 | 0.59587 | |
| RegenerationR2 | -0.381 | 4.724 | 0.21998 | 0.66764 | |
| RegenerationR3 | 0.263 | 4.724 | 0.43141 | 0.82185 | |
| RegenerationR4 | -0.297 | 4.724 | 0.35844 | 0.78664 | |
| RegenerationR5 | -0.384 | 4.724 | 0.18542 | 0.61577 | |
| RegenerationR6 | 0.049 | 4.724 | 0.88290 | 1.00000 | |
| RegenerationBL | -1.053 | 4.724 | 0.04815 | 0.25163 | |
| RegenerationTP | 1.017 | 4.724 | 0.02836 | 0.28309 |
Genes with expression patterns similar to MligTC455_37778
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_37778 | 1051 | 21.89 | Mlig455_036726 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.197/0.00011 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_036726 {REF} {Length: 681} {TRANSSPLICED} {Pfam: Hypoxia induced protein conserved region [PF04588.15, score=26.0]} {Mouse: ENSMUSG00000038412, Higd1a, HIG1 domain family, member 1A, [RH, Score=50.4, Expect=1e-08]} {Smed: dd_Smed_v6_417_1_1, dd_Smed_v6_417_1_1, [RH, Score=58.9, Expect=2e-12]} {RNA1509_55075, RNA1509_9993} {RNA1310_51983, RNA1509_55075, RNA1509_9993} {RNA1509_55075, RNA1509_9993, RNA815_27082} | |
| 2. | MligTC455_29234 | 1643 | 34.23 | Mlig455_054776, Mlig455_054803 | Neo: - Age: - Region-enriched R5: 1.020/0.01262 |
1.755 | - | - | - | 0.803 | - | 0.952 | Mlig455_054776 {REF} {Length: 1130} {TRANSSPLICED} {RNA1509_31022} {RNA1310_44572} {RNA815_31507} Mlig455_054803 {REF} {Length: 1078} {TRANSSPLICED} {RNA1509_31022} {RNA1310_44572} {RNA815_31507} |
|
| 3. | MligTC455_42049 | 1887 | 39.32 | Mlig455_027189, Mlig455_030708 | Neo: - Age: - Region-enriched R4: 1.193/0.00320 |
1.745 | - | - | - | - | 0.790 | 0.955 | Mlig455_027189 {REF} {Length: 1388} {TRANSSPLICED} {Pfam: CUE domain [PF02845.18, score=18.4]} {RNA1509_40462} {RNA1310_19777} {RNA815_7846} Mlig455_030708 {REF} {Length: 1383} {TRANSSPLICED} {Pfam: CUE domain [PF02845.18, score=18.6]} {RNA1509_40462, RNA1509_54491, RNA1509_54789} {RNA1310_19777, RNA1509_40462, RNA1509_54491, RNA1509_54789} {RNA1509_40462, RNA1509_54491, RNA1509_54789, RNA815_7846} |
|
| 4. | MligTC455_44674 | 1314 | 27.38 | Mlig455_061139 | Neo: - Age: logFC(26M/2M)=-0.419 Region-enriched R5: 1.013/0.03021 |
CIAO1 | 1.715 | - | - | - | - | 0.751 | 0.964 | Mlig455_061139 {REF} {Length: 867} {Pfam: WD domain, G-beta repeat [PF00400.34, score=75.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=28.7]} {Human: ENSG00000144021, CIAO1, cytosolic iron-sulfur assembly component 1, [Score=115, Expect=4e-30]} {Mouse: ENSMUSG00000003662, Ciao1, cytosolic iron-sulfur protein assembly 1, [Score=115, Expect=1e-30]} {Dmel: FBgn0033972, Ciao1, [Score=105, Expect=6e-27]} {Celegans: WBGene00021899, Y54H5A.1, [Score=59.3, Expect=3e-10]} {Smed: dd_Smed_v6_6661_0_1, dd_Smed_v6_6661_0_1, [Score=117, Expect=2e-31]} {RNA1509_17029} {RNA1310_26308} {RNA815_12985} |
| 5. | MligTC455_43966 | 972 | 20.25 | Mlig455_070780 | Neo: Int S/G2/M Age: - |
EMC10 | 1.683 | - | - | - | - | 0.733 | 0.950 | Mlig455_070780 {REF} {Length: 876} {TRANSSPLICED} {Human: ENSG00000161671, EMC10, ER membrane protein complex subunit 10, [RH, Score=75.5, Expect=1e-15]} {Mouse: ENSMUSG00000008140, Emc10, ER membrane protein complex subunit 10, [RH, Score=79.0, Expect=2e-17]} {Dmel: FBgn0052441, CG32441, [RH, Score=64.7, Expect=1e-12]} {Celegans: WBGene00012829, Y43F8C.7, [RH, Score=62.4, Expect=8e-12]} {Smed: dd_Smed_v6_2594_0_1, dd_Smed_v6_2594_0_1, [RH, Score=89.7, Expect=5e-22]} {RNA1509_27493, RNA1509_41782} {RNA1310_9560, RNA1509_41782} {RNA1509_41782, RNA815_13374} |
| 6. | MligTC455_42332 | 831 | 17.32 | Mlig455_049097 | Neo: Int S/G2/M Age: - |
HARS | 1.679 | - | 0.727 | - | - | - | 0.952 | Mlig455_049097 {REF} {Length: 3093} {TRANSSPLICED} {Pfam: Histidyl-tRNA synthetase [PF13393.8, score=151.2]; Anticodon binding domain [PF03129.22, score=47.6]} {Human: ENSG00000170445, HARS, histidyl-tRNA synthetase, [RH, Score=530, Expect=0.0]} {Mouse: ENSMUSG00000001380, Hars, histidyl-tRNA synthetase, [RH, Score=534, Expect=0.0]} {Dmel: FBgn0027087, HisRS, Histidyl-tRNA synthetase, [RH, Score=492, Expect=2e-170]} {Celegans: WBGene00002001, hars-1, Histidine--tRNA ligase, [RH, Score=439, Expect=9e-150]} {Smed: dd_Smed_v6_1304_0_2, dd_Smed_v6_1304_0_2, [RH, Score=435, Expect=6e-144]} {RNA1509_26856, RNA1509_4721} {RNA1310_6281, RNA1509_26856, RNA1509_4721} {RNA1509_26856, RNA1509_4721, RNA815_6780} |
| 7. | MligTC455_38769 | 1242 | 25.88 | Mlig455_008566 | Neo: - |
NIT1 | 0.975 | - | - | - | - | - | 0.975 | Mlig455_008566 {REF} {Length: 2098} {TRANSSPLICED} {Pfam: Carbon-nitrogen hydrolase [PF00795.24, score=192.1]; HIT domain [PF01230.25, score=64.4]; Ribosomal L29 protein [PF00831.25, score=63.9]} {Human: ENSG00000158793, NIT1, nitrilase 1, [RH, Score=259, Expect=5e-81]} {Mouse: ENSMUSG00000013997, Nit1, nitrilase 1, [RH, Score=267, Expect=2e-84]} {Dmel: FBgn0024945, NitFhit, Nitrilase and fragile histidine triad fusion protein, [RH, Score=313, Expect=4e-100]} {Celegans: WBGene00003594, nft-1, Nitrilase and fragile histidine triad fusion protein NitFhit Bis(5'-adenosyl)-triphosphatase Nitrilase homolog, [RH, Score=358, Expect=5e-118]} {Smed: dd_Smed_v6_2711_0_1, dd_Smed_v6_2711_0_1, [RH, Score=399, Expect=4e-134]} {RNA1509_19262} {RNA1310_18639.1} {RNA815_7752.1} |
| 8. | MligTC455_18618 | 664 | 13.84 | Mlig455_010728 | Neo: - Age: Down-Up-Up Region-enriched R5: 2.548/0.00001 |
MED22 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_010728 {REF} {Length: 615} {TRANSSPLICED} {Pfam: Surfeit locus protein 5 subunit 22 of Mediator complex [PF06179.14, score=44.2]} {Human: ENSG00000281022, MED22, mediator complex subunit 22, [RH, Score=55.5, Expect=4e-10]; ENSG00000148297, MED22, mediator complex subunit 22, [RH, Score=55.5, Expect=4e-10]} {Mouse: ENSMUSG00000015776, Med22, mediator complex subunit 22, [RH, Score=55.1, Expect=4e-10]} {Dmel: FBgn0040339, MED22, Mediator complex subunit 22, [RH, Score=65.5, Expect=3e-14]} {RNA1509_27126, RNA1509_41790} {RNA1310_6046.1, RNA1509_27126, RNA1509_41790} {RNA1509_27126, RNA1509_41790, RNA815_29735} |
| 9. | MligTC455_24225 | 919 | 19.15 | Mlig455_040985 | Neo: - Age: logFC(26M/2M)=0.529 Region-enriched R5: 1.655/0.00002 |
EIF3J | 0.959 | - | - | - | - | - | 0.959 | Mlig455_040985 {REF} {Length: 2177} {TRANSSPLICED} {Pfam: Translation initiation factor eIF3 subunit [PF08597.12, score=167.6]} {Human: ENSG00000104131, EIF3J, eukaryotic translation initiation factor 3 subunit J, [RH, Score=78.2, Expect=2e-16]} {Mouse: ENSMUSG00000027236, Eif3j1, eukaryotic translation initiation factor 3, subunit J1, [RH, Score=76.6, Expect=4e-16]; ENSMUSG00000043424, Eif3j2, eukaryotic translation initiation factor 3, subunit J2, [RH, Score=76.6, Expect=5e-16]} {Dmel: FBgn0027619, eIF3j, eukaryotic translation initiation factor 3 subunit j, [RH, Score=79.3, Expect=2e-17]} {Smed: dd_Smed_v6_930_0_1, dd_Smed_v6_930_0_1, [RH, Score=61.2, Expect=3e-11]} {RNA1509_31641, RNA1509_34834, RNA1509_36522} {RNA1310_35319, RNA1509_31641, RNA1509_34834, RNA1509_36522} {RNA1509_31641, RNA1509_34834, RNA1509_36522, RNA815_17074.1} |
| 10. | MligTC455_42754 | 591 | 12.31 | Mlig455_054975 | Neo: - Age: logFC(26M/2M)=0.602 Region-enriched R5: 1.231/0.00919 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_054975 {REF} {Length: 1228} {RNA1509_4801} {RNA1310_4176} {RNA815_611.1} | |
| 11. | MligTC455_44494 | 1875 | 39.07 | Mlig455_020326 | Neo: - Age: - |
DDRGK1 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_020326 {REF} {Length: 1418} {TRANSSPLICED} {Pfam: DDRGK domain [PF09756.11, score=176.9]} {Human: ENSG00000198171, DDRGK1, DDRGK domain containing 1, [RH, Score=129, Expect=1e-34]} {Mouse: ENSMUSG00000068290, Ddrgk1, DDRGK domain containing 1, [RH, Score=130, Expect=4e-35]} {Dmel: FBgn0038868, CG5862, [RH, Score=122, Expect=3e-32]} {Celegans: WBGene00022865, ufbp-1, DDRGK domain-containing protein 1, [RH, Score=110, Expect=4e-28]} {Smed: dd_Smed_v6_4203_0_1, dd_Smed_v6_4203_0_1, [RH, Score=120, Expect=5e-32]} {RNA1509_27561, RNA1509_36548, RNA1509_6239} {RNA1310_23709, RNA1509_27561, RNA1509_36548, RNA1509_6239} {RNA1509_27561, RNA1509_36548, RNA1509_6239, RNA815_12496} |
| 12. | MligTC455_50646 | 258 | 5.37 | Mlig455_069118 | Neo: - Age: - |
SCYL1 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_069118 {REF} {Length: 3667} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=41.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.1]; HEAT repeats [PF13646.8, score=32.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=27.4]; Protein kinase domain [PF00069.27, score=25.0]} {Human: ENSG00000142186, SCYL1, SCY1 like pseudokinase 1, [RH, Score=446, Expect=1e-144]} {Mouse: ENSMUSG00000024941, Scyl1, SCY1-like 1 (S. cerevisiae), [RH, Score=445, Expect=3e-144]} {Dmel: FBgn0260990, yata, [RH, Score=518, Expect=6e-172]} {Celegans: WBGene00012337, W07G4.3, [RH, Score=409, Expect=9e-131]} {Smed: dd_Smed_v6_3470_0_1, dd_Smed_v6_3470_0_1, [RH, Score=461, Expect=2e-152]} {RNA1509_23084} {RNA1310_4140} {RNA815_4060} |
| 13. | MligTC455_20299 | 295 | 6.15 | Mlig455_059102 | Neo: - Age: - |
SLC17A5 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_059102 {REF} {Length: 2831} {Pfam: Major Facilitator Superfamily [PF07690.18, score=144.7]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=26.7]; Sugar (and other) transporter [PF00083.26, score=20.2]} {Human: ENSG00000119899, SLC17A5, solute carrier family 17 member 5, [Score=186, Expect=2e-53]} {Mouse: ENSMUSG00000049624, Slc17a5, solute carrier family 17 (anion/sugar transporter), member 5, [Score=181, Expect=2e-51]} {Dmel: FBgn0038799, MFS9, Major Facilitator Superfamily Transporter 9, [Score=159, Expect=1e-43]} {Celegans: WBGene00022647, slc-17.1, SLC (SoLute Carrier) homolog, [Score=144, Expect=3e-38]} {Smed: dd_Smed_v6_6845_0_1, dd_Smed_v6_6845_0_1, [RH, Score=494, Expect=2e-174]} {RNA1509_39490} {RNA1310_17100} {RNA815_9623} |
| 14. | MligTC455_33782 | 923 | 19.23 | Mlig455_016500 | Neo: Int S/G2/M Age: - |
ZSCAN20 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_016500 {REF} {Length: 2318} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=50.3]; C2H2-type zinc finger [PF13894.8, score=46.0]; Zinc finger, C2H2 type [PF00096.28, score=44.9]; Zinc-finger of C2H2 type [PF12874.9, score=27.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.2]} {Human: ENSG00000121903, ZSCAN20, zinc finger and SCAN domain containing 20, [Score=108, Expect=1e-25]; ENSG00000197951, ZNF71, zinc finger protein 71, [Score=103, Expect=4e-24]} {Mouse: ENSMUSG00000057101, Zfp180, zinc finger protein 180, [Score=104, Expect=2e-24]; ENSMUSG00000020491, 2810021J22Rik, RIKEN cDNA 2810021J22 gene, [Score=101, Expect=1e-23]; ENSMUSG00000050605, Zfp61, zinc finger protein 61, [Score=100, Expect=2e-23]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=100, Expect=3e-23]; ENSMUSG00000052675, Zfp112, zinc finger protein 112, [Score=99.0, Expect=1e-22]} {Dmel: FBgn0028878, CG15269, [Score=90.5, Expect=6e-20]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=84.7, Expect=1e-18]} {Smed: dd_Smed_v6_9867_0_1, dd_Smed_v6_9867_0_1, [Score=85.1, Expect=1e-18]} {RNA1509_56583} {RNA1310_45418.1} {RNA815_18422.2} |
| 15. | MligTC455_45283 | 303 | 6.32 | Mlig455_001036 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_001036 {REF} {Length: 1698} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=43.1]; Tetratricopeptide repeat [PF00515.30, score=26.8]; Tetratricopeptide repeat [PF13374.8, score=22.7]; Tetratricopeptide repeat [PF07719.19, score=21.2]} {RNA1509_50264, RNA1509_52648} {RNA1310_23457.1, RNA1509_50264, RNA1509_52648} {RNA1509_50264, RNA1509_52648, RNA815_20633} | |
| 16. | MligTC455_38342 | 2332 | 48.58 | Mlig455_021862 | Neo: Neoblast Age: - Region-enriched R5: 1.004/0.00088 |
MRPS18B | 0.953 | - | - | - | - | - | 0.953 | Mlig455_021862 {REF} {Length: 1122} {Human: ENSG00000223775, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=2e-21]; ENSG00000203624, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=2e-21]; ENSG00000204568, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=2e-21]; ENSG00000229861, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=2e-21]; ENSG00000227420, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=2e-21]; ENSG00000233813, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=2e-21]; ENSG00000226111, MRPS18B, mitochondrial ribosomal protein S18B, [RH, Score=92.4, Expect=2e-21]} {Mouse: ENSMUSG00000024436, Mrps18b, mitochondrial ribosomal protein S18B, [RH, Score=88.2, Expect=4e-20]} {Dmel: FBgn0032849, mRpS18B, mitochondrial ribosomal protein S18B, [RH, Score=139, Expect=7e-40]} {Celegans: WBGene00011759, mrps-18B, Mitochondrial Ribosomal Protein, Small, [RH, Score=84.3, Expect=5e-19]} {Smed: dd_Smed_v6_3535_0_1, dd_Smed_v6_3535_0_1, [RH, Score=131, Expect=1e-36]} {RNA1509_17779, RNA1509_5195} {RNA1310_13167, RNA1509_5195} {RNA1509_5195, RNA815_325} |
Berezikov Lab - 2020-2021 © ERIBA