Data search
Results for MligTC455_45283
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45283 | 303 | 6.32 | Mlig455_001036 | Neo: - Age: - |
Mlig455_001036 {REF} {Length: 1698} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=43.1]; Tetratricopeptide repeat [PF00515.30, score=26.8]; Tetratricopeptide repeat [PF13374.8, score=22.7]; Tetratricopeptide repeat [PF07719.19, score=21.2]} {RNA1509_50264, RNA1509_52648} {RNA1310_23457.1, RNA1509_50264, RNA1509_52648} {RNA1509_50264, RNA1509_52648, RNA815_20633} |
Cumulative graph for MligTC455_45283
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.035 | 3.261 | 1.00000 | 1.00000 | |
| RegionR2 | 1.396 | 3.261 | 0.17256 | 0.51955 | |
| RegionR3 | 1.336 | 3.261 | 0.16774 | 0.69092 | |
| RegionR4 | 2.162 | 3.261 | 0.01565 | 0.08521 | |
| RegionR5 | 1.756 | 3.261 | 0.03875 | 0.15591 | |
| RegionR6 | 1.271 | 3.261 | 0.19884 | 0.76876 | |
| RegionR7 | 2.162 | 3.261 | 0.02638 | 0.30590 | |
| RegionR8 | -5.049 | 3.261 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.282 | 3.261 | 0.99986 | 1.00000 | |
| RegenerationR2 | -0.598 | 3.261 | 0.11515 | 0.52777 | |
| RegenerationR3 | -0.55 | 3.261 | 0.25296 | 0.68736 | |
| RegenerationR4 | -0.496 | 3.261 | 0.29241 | 0.73590 | |
| RegenerationR5 | -0.201 | 3.261 | 0.62099 | 0.91926 | |
| RegenerationR6 | -0.344 | 3.261 | 0.48136 | 0.79265 | |
| RegenerationBL | 0.312 | 3.261 | 0.70012 | 1.00000 | |
| RegenerationTP | 1.844 | 3.261 | 0.33295 | 0.77702 |
Genes with expression patterns similar to MligTC455_45283
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45283 | 303 | 6.32 | Mlig455_001036 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_001036 {REF} {Length: 1698} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=43.1]; Tetratricopeptide repeat [PF00515.30, score=26.8]; Tetratricopeptide repeat [PF13374.8, score=22.7]; Tetratricopeptide repeat [PF07719.19, score=21.2]} {RNA1509_50264, RNA1509_52648} {RNA1310_23457.1, RNA1509_50264, RNA1509_52648} {RNA1509_50264, RNA1509_52648, RNA815_20633} | |
| 2. | MligTC455_45870 | 524 | 10.92 | Mlig455_060823 | Neo: Int S/G2/M Age: - |
CISD3 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_060823 {REF} {Length: 1397} {TRANSSPLICED} {Pfam: Iron-binding zinc finger CDGSH type [PF09360.12, score=61.8]} {Human: ENSG00000277972, CISD3, CDGSH iron sulfur domain 3, [RH, Score=75.9, Expect=1e-17]; ENSG00000274768, CISD3, CDGSH iron sulfur domain 3, [RH, Score=75.9, Expect=1e-17]} {Mouse: ENSMUSG00000078695, Cisd3, CDGSH iron sulfur domain 3, [RH, Score=80.1, Expect=2e-19]} {Dmel: FBgn0033100, CG3420, [RH, Score=74.3, Expect=2e-17]} {Celegans: WBGene00010909, cisd-3.1, CDGSH Iron Sulfur Domain protein homolog, [RH, Score=74.7, Expect=2e-17]} {Smed: dd_Smed_v6_10541_0_1, dd_Smed_v6_10541_0_1, [RH, Score=120, Expect=2e-35]} {RNA1509_25702, RNA1509_49503, RNA1509_57016} {RNA1310_22872, RNA1509_25702, RNA1509_49503, RNA1509_57016} {RNA1509_25702, RNA1509_49503, RNA1509_57016, RNA815_22621.2} |
| 3. | MligTC455_45484 | 127 | 2.64 | Mlig455_054852 | Neo: - Age: - Region-enriched R8: 4.705/0.02905 |
DNTTIP2 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_054852 {REF} {Length: 2704} {TRANSSPLICED} {Pfam: Fcf2 pre-rRNA processing [PF08698.13, score=82.8]} {Human: ENSG00000067334, DNTTIP2, deoxynucleotidyltransferase terminal interacting protein 2, [RH, Score=103, Expect=1e-24]} {Mouse: ENSMUSG00000039756, Dnttip2, deoxynucleotidyltransferase, terminal, interacting protein 2, [RH, Score=106, Expect=5e-26]} {Dmel: FBgn0037504, CG1142, [RH, Score=70.9, Expect=3e-14]} {Celegans: WBGene00021715, Y49F6B.2, [RH, Score=93.6, Expect=6e-23]} {Smed: dd_Smed_v6_10912_0_1, dd_Smed_v6_10912_0_1, [RH, Score=62.4, Expect=8e-12]} {RNA1509_18463} {RNA1310_33257, RNA1509_18463} {RNA1509_18463, RNA815_17985} |
| 4. | MligTC455_50646 | 258 | 5.37 | Mlig455_069118 | Neo: - Age: - |
SCYL1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_069118 {REF} {Length: 3667} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=41.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.1]; HEAT repeats [PF13646.8, score=32.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=27.4]; Protein kinase domain [PF00069.27, score=25.0]} {Human: ENSG00000142186, SCYL1, SCY1 like pseudokinase 1, [RH, Score=446, Expect=1e-144]} {Mouse: ENSMUSG00000024941, Scyl1, SCY1-like 1 (S. cerevisiae), [RH, Score=445, Expect=3e-144]} {Dmel: FBgn0260990, yata, [RH, Score=518, Expect=6e-172]} {Celegans: WBGene00012337, W07G4.3, [RH, Score=409, Expect=9e-131]} {Smed: dd_Smed_v6_3470_0_1, dd_Smed_v6_3470_0_1, [RH, Score=461, Expect=2e-152]} {RNA1509_23084} {RNA1310_4140} {RNA815_4060} |
| 5. | MligTC455_37778 | 1051 | 21.89 | Mlig455_036726 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.197/0.00011 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_036726 {REF} {Length: 681} {TRANSSPLICED} {Pfam: Hypoxia induced protein conserved region [PF04588.15, score=26.0]} {Mouse: ENSMUSG00000038412, Higd1a, HIG1 domain family, member 1A, [RH, Score=50.4, Expect=1e-08]} {Smed: dd_Smed_v6_417_1_1, dd_Smed_v6_417_1_1, [RH, Score=58.9, Expect=2e-12]} {RNA1509_55075, RNA1509_9993} {RNA1310_51983, RNA1509_55075, RNA1509_9993} {RNA1509_55075, RNA1509_9993, RNA815_27082} | |
| 6. | MligTC455_26462 | 731 | 15.22 | Mlig455_005608, Mlig455_014452, Mlig455_070389 | Neo: - Age: - Region-enriched R7: 1.475/0.00853 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_005608 {REF} {Length: 4206} {Pfam: Phytochelatin synthase [PF05023.16, score=265.8]} {Celegans: WBGene00003960, pcs-1, PhytoChelatin Synthase, [RH, Score=236, Expect=3e-71]} {Smed: dd_Smed_v6_11700_0_1, dd_Smed_v6_11700_0_1, [RH, Score=290, Expect=1e-91]} {RNA1509_24601, RNA1509_44343, RNA1509_47694} {RNA1310_2075.1, RNA1509_44343, RNA1509_47694} {RNA1509_44343, RNA1509_47694, RNA815_19183} Mlig455_014452 {REF} {Length: 4945} {TRANSSPLICED} {Pfam: Phytochelatin synthase [PF05023.16, score=267.3]} {Celegans: WBGene00003960, pcs-1, PhytoChelatin Synthase, [RH, Score=236, Expect=6e-73]} {Smed: dd_Smed_v6_11700_0_1, dd_Smed_v6_11700_0_1, [RH, Score=290, Expect=3e-93]} {RNA1509_24601} {RNA1310_2075.1, RNA1509_24601} {RNA1509_24601, RNA815_19183} Mlig455_070389 {REF} {Length: 4463} {TRANSSPLICED} {Pfam: Phytochelatin synthase [PF05023.16, score=267.3]} {Celegans: WBGene00003960, pcs-1, PhytoChelatin Synthase, [RH, Score=236, Expect=6e-73]} {Smed: dd_Smed_v6_11700_0_1, dd_Smed_v6_11700_0_1, [RH, Score=290, Expect=3e-93]} {RNA1509_24601} {RNA1310_2075.1} {RNA815_19183} |
|
| 7. | MligTC455_42600 | 98 | 2.04 | Mlig455_040635 | Neo: - Age: - |
ZHX1-C8orf76 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_040635 {REF} {Length: 1515} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5588) [PF17826.3, score=64.3]} {Human: ENSG00000259305, ZHX1-C8orf76, ZHX1-C8orf76 readthrough, [RH, Score=65.5, Expect=1e-11]} {Mouse: ENSMUSG00000116094, 9130401M01Rik, RIKEN cDNA 9130401M01 gene, [Score=73.2, Expect=2e-14]; ENSMUSG00000101892, 9130401M01Rik, RIKEN cDNA 9130401M01 gene, [Score=73.2, Expect=2e-14]} {RNA1509_47858} {RNA1310_31212, RNA1509_47858} {RNA1509_47858, RNA815_15529} |
| 8. | MligTC455_34197 | 156 | 3.24 | Mlig455_055430 | Neo: - Age: Down-Up-Down |
AVL9 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_055430 {REF} {Length: 4958} {Pfam: Transport protein Avl9 [PF09794.11, score=422.7]; Docking domain of Afi1 for Arf3 in vesicle trafficking [PF07792.14, score=27.1]; DENN domain-containing protein 11 [PF09804.11, score=27.0]} {Human: ENSG00000105778, AVL9, AVL9 cell migration associated, [Score=245, Expect=4e-70]} {Mouse: ENSMUSG00000029787, Avl9, AVL9 cell migration associated, [Score=267, Expect=5e-78]} {Dmel: FBgn0030499, CG11178, [Score=225, Expect=1e-62]} {Celegans: WBGene00020822, T26A5.6, [Score=197, Expect=2e-54]} {Smed: dd_Smed_v6_6271_0_1, dd_Smed_v6_6271_0_1, [Score=207, Expect=2e-56]} {RNA1509_5789} {RNA1310_969.3} {RNA815_4477.1} |
| 9. | MligTC455_14648 | 394 | 8.21 | Mlig455_006859 | Neo: - Age: logFC(26M/2M)=0.300 |
CLPB | 0.951 | - | - | - | - | - | 0.951 | Mlig455_006859 {REF} {Length: 4077} {TRANSSPLICED} {Pfam: AAA domain (Cdc48 subfamily) [PF07724.16, score=137.2]; Ankyrin repeat [PF00023.32, score=52.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=48.3]; Ankyrin repeats (3 copies) [PF12796.9, score=45.3]; Ankyrin repeat [PF13606.8, score=40.3]; Ankyrin repeats (many copies) [PF13637.8, score=35.3]; C-terminal, D2-small domain, of ClpB protein [PF10431.11, score=31.8]; Ankyrin repeats (many copies) [PF13857.8, score=30.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=29.8]; AAA domain [PF13401.8, score=26.5]; AAA ATPase domain [PF13191.8, score=23.4]; Sigma-54 interaction domain [PF00158.28, score=20.6]} {Human: ENSG00000162129, CLPB, ClpB homolog, mitochondrial AAA ATPase chaperonin, [RH, Score=522, Expect=1e-177]} {Mouse: ENSMUSG00000001829, Clpb, ClpB caseinolytic peptidase B, [RH, Score=525, Expect=4e-179]} {Dmel: FBgn0039075, CG4393, [Score=53.9, Expect=5e-07]} {Smed: dd_Smed_v6_7341_0_1, dd_Smed_v6_7341_0_1, [RH, Score=508, Expect=4e-174]} {RNA1509_24624, RNA1509_48777, RNA1509_49644, RNA1509_56365} {RNA1310_12205.1, RNA1509_24624, RNA1509_48777, RNA1509_49644, RNA1509_56365} {RNA1509_24624, RNA1509_48777, RNA1509_49644, RNA1509_56365, RNA815_4340} |
| 10. | MligTC455_19161 | 783 | 16.32 | Mlig455_008517 | Neo: - Age: Down-Down-Up Region-enriched R5: 1.247/0.00353 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_008517 {REF} {Length: 1080} {TRANSSPLICED} {Dmel: FBgn0030786, mRpL22, mitochondrial ribosomal protein L22, [RH, Score=59.3, Expect=4e-10]} {Smed: dd_Smed_v6_2175_0_1, dd_Smed_v6_2175_0_1, [RH, Score=78.2, Expect=5e-17]} {RNA1509_27643} {RNA1310_27864.1} {RNA815_12212.1} | |
| 11. | MligTC455_27710 | 431 | 8.97 | Mlig455_033197 | Neo: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_033197 {REF} {Length: 3196} {TRANSSPLICED} {RNA1509_32482} {RNA1310_12605} {RNA815_5670} | |
| 12. | MligTC455_49169 | 409 | 8.52 | Mlig455_014589 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 2.141 |
SLC30A5 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_014589 {REF} {Length: 3364} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=140.9]} {Human: ENSG00000145740, SLC30A5, solute carrier family 30 member 5, [Score=456, Expect=3e-150]} {Mouse: ENSMUSG00000021629, Slc30a5, solute carrier family 30 (zinc transporter), member 5, [Score=446, Expect=1e-146]} {Dmel: FBgn0037875, ZnT86D, Zinc transporter 86D, [Score=136, Expect=8e-35]} {Celegans: WBGene00013668, Y105E8A.3, [Score=327, Expect=2e-101]} {Smed: dd_Smed_v6_4378_0_1, dd_Smed_v6_4378_0_1, [Score=401, Expect=1e-129]} {RNA1509_47381} {RNA1310_7900} {RNA815_16274} |
| 13. | MligTC455_53442 | 356 | 7.42 | Mlig455_013869 | Neo: - Age: - |
NUP98 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_013869 {REF} {Length: 3557} {TRANSSPLICED} {Pfam: Nuclear protein 96 [PF12110.10, score=234.1]} {Human: ENSG00000110713, NUP98, nucleoporin 98, [RH, Score=223, Expect=6e-62]} {Mouse: ENSMUSG00000063550, Nup98, nucleoporin 98, [RH, Score=236, Expect=3e-65]} {Dmel: FBgn0039120, Nup98-96, Nucleoporin 98-96kD, [Score=213, Expect=1e-57]} {Celegans: WBGene00003796, npp-10, Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96, [Score=117, Expect=8e-27]} {Smed: dd_Smed_v6_5347_0_2, dd_Smed_v6_5347_0_2, [Score=196, Expect=6e-52]} {RNA1509_11771} {RNA1310_8788, RNA1509_11771} {RNA1509_11771, RNA815_6858} |
Berezikov Lab - 2020-2021 © ERIBA