TomoSeq data search

Data search

Results for MligTC455_37862

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37862

39

0.81

Mlig455_068748

Neo: -

Age: -

NBAS

Mlig455_068748 {REF} {Length: 8968} {TRANSSPLICED} {Pfam: Secretory pathway protein Sec39 [PF08314.13, score=45.8]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=34.8]} {Human: ENSG00000151779, NBAS, neuroblastoma amplified sequence, [RH, Score=378, Expect=9e-105]} {Mouse: ENSMUSG00000020576, Nbas, neuroblastoma amplified sequence, [RH, Score=405, Expect=3e-113]} {Celegans: WBGene00008990, smgl-1, [RH, Score=57.8, Expect=1e-07]} {Smed: dd_Smed_v6_7998_0_1, dd_Smed_v6_7998_0_1, [RH, Score=203, Expect=4e-52]} {RNA1509_11685} {RNA1310_353.1} {RNA815_138}

Cumulative graph for MligTC455_37862

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.014	1.322	1.00000	1.00000
RegionR2	0.368	1.322	0.69002	1.00000
RegionR3	0.303	1.322	0.68555	1.00000
RegionR4	1.532	1.322	0.29669	0.60863
RegionR5	1.18	1.322	0.30337	0.63945
RegionR6	0.658	1.322	0.56418	1.00000
RegionR7	1.602	1.322	0.31219	0.94642
RegionR8	-3.628	1.322	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.296	1.322	0.99993	1.00000
RegenerationR2	0.51	1.322	0.57759	0.90566
RegenerationR3	-0.117	1.322	0.90538	1.00000
RegenerationR4	-0.829	1.322	0.45966	0.84722
RegenerationR5	-0.027	1.322	0.97734	1.00000
RegenerationR6	-0.231	1.322	0.84350	0.99745
RegenerationBL	1.519	1.322	0.41968	0.78828
RegenerationTP	0.718	1.322	0.69652	1.00000

Genes with expression patterns similar to MligTC455_37862

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37862	39	0.81	Mlig455_068748	Neo: - Age: -	NBAS	5	1.000	1.000	1.000	-	1.000	1.000	Mlig455_068748 {REF} {Length: 8968} {TRANSSPLICED} {Pfam: Secretory pathway protein Sec39 [PF08314.13, score=45.8]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=34.8]} {Human: ENSG00000151779, NBAS, neuroblastoma amplified sequence, [RH, Score=378, Expect=9e-105]} {Mouse: ENSMUSG00000020576, Nbas, neuroblastoma amplified sequence, [RH, Score=405, Expect=3e-113]} {Celegans: WBGene00008990, smgl-1, [RH, Score=57.8, Expect=1e-07]} {Smed: dd_Smed_v6_7998_0_1, dd_Smed_v6_7998_0_1, [RH, Score=203, Expect=4e-52]} {RNA1509_11685} {RNA1310_353.1} {RNA815_138}
2.	MligTC455_37861	26	0.55	Mlig455_015320	Neo: - Age: Up-Down-Up	NBAS	2.878	0.942	0.988	-	-	-	0.948	Mlig455_015320 {REF} {Length: 8596} {TRANSSPLICED} {Pfam: Secretory pathway protein Sec39 [PF08314.13, score=49.8]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=33.5]} {Human: ENSG00000151779, NBAS, neuroblastoma amplified sequence, [RH, Score=380, Expect=1e-105]} {Mouse: ENSMUSG00000020576, Nbas, neuroblastoma amplified sequence, [RH, Score=410, Expect=8e-115]} {Celegans: WBGene00008990, smgl-1, [RH, Score=57.8, Expect=1e-07]} {Smed: dd_Smed_v6_7998_0_1, dd_Smed_v6_7998_0_1, [RH, Score=202, Expect=1e-51]} {RNA1509_11685} {RNA1310_353.1} {RNA815_138}
3.	MligTC455_44743	509	10.61	Mlig455_019311, Mlig455_019532	Neo: Int S/G2/M Age: -	NUDC, NUDCD3	1.785	-	-	0.953	-	0.832	-	Mlig455_019311 {REF} {Length: 1886} {TRANSSPLICED} {Pfam: N-terminal conserved domain of Nudc. [PF14050.8, score=57.6]; CS domain [PF04969.18, score=20.1]} {Human: ENSG00000090273, NUDC, nuclear distribution C, dynein complex regulator, [Score=89.0, Expect=8e-20]} {Mouse: ENSMUSG00000053838, Nudcd3, NudC domain containing 3, [Score=99.4, Expect=1e-23]} {Dmel: FBgn0021768, nudC, [Score=94.4, Expect=5e-22]} {Celegans: WBGene00003829, nud-1, Aspergillus NUclear Division related; NUD-1, [Score=99.0, Expect=7e-24]} {Smed: dd_Smed_v6_7023_0_2, dd_Smed_v6_7023_0_2, [Score=185, Expect=5e-57]} {RNA1509_25713} {RNA1310_26745} {RNA815_9280} Mlig455_019532 {REF} {Length: 1905} {TRANSSPLICED} {Pfam: N-terminal conserved domain of Nudc. [PF14050.8, score=57.4]; CS domain [PF04969.18, score=34.3]} {Human: ENSG00000015676, NUDCD3, NudC domain containing 3, [RH, Score=193, Expect=2e-58]} {Mouse: ENSMUSG00000053838, Nudcd3, NudC domain containing 3, [RH, Score=184, Expect=5e-55]} {Dmel: FBgn0051251, CG31251, [RH, Score=138, Expect=2e-38]} {Celegans: WBGene00003829, nud-1, Aspergillus NUclear Division related; NUD-1, [Score=128, Expect=3e-34]} {Smed: dd_Smed_v6_7023_0_2, dd_Smed_v6_7023_0_2, [RH, Score=254, Expect=3e-83]} {RNA1509_19603, RNA1509_25713, RNA1509_35245} {RNA1310_26745, RNA1509_19603, RNA1509_25713, RNA1509_35245} {RNA1509_19603, RNA1509_25713, RNA1509_35245, RNA815_9280}
4.	MligTC455_41653	250	5.22	Mlig455_005803, Mlig455_005831	Neo: - Age: logFC(26M/2M)=-0.376	KCTD3	1.702	-	-	0.955	-	-	0.747	Mlig455_005803 {REF} {Length: 2933} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF02214.24, score=79.9]} {Human: ENSG00000136636, KCTD3, potassium channel tetramerization domain containing 3, [RH, Score=514, Expect=3e-173]} {Mouse: ENSMUSG00000026608, Kctd3, potassium channel tetramerisation domain containing 3, [RH, Score=513, Expect=1e-172]} {Dmel: FBgn0037758, CG9467, [RH, Score=363, Expect=8e-116]} {Celegans: WBGene00020721, T23B12.6, [RH, Score=365, Expect=2e-117]} {Smed: dd_Smed_v6_3856_0_1, dd_Smed_v6_3856_0_1, [RH, Score=265, Expect=2e-78]} {RNA1509_47253} {RNA1310_12536} {RNA815_15392} Mlig455_005831 {REF} {Length: 2953} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF02214.24, score=79.9]} {Human: ENSG00000136636, KCTD3, potassium channel tetramerization domain containing 3, [RH, Score=513, Expect=8e-173]} {Mouse: ENSMUSG00000026608, Kctd3, potassium channel tetramerisation domain containing 3, [RH, Score=512, Expect=2e-172]} {Dmel: FBgn0037758, CG9467, [RH, Score=362, Expect=1e-115]} {Celegans: WBGene00020721, T23B12.6, [RH, Score=365, Expect=1e-117]} {Smed: dd_Smed_v6_3856_0_1, dd_Smed_v6_3856_0_1, [RH, Score=266, Expect=8e-79]} {RNA1509_47253, RNA1509_53266} {RNA1310_12536, RNA1509_47253, RNA1509_53266} {RNA1509_47253, RNA1509_53266, RNA815_15392}
5.	MligTC455_12804	44	0.92	Mlig455_049628	Neo: - Age: -		0.994	-	-	0.994	-	-	-	Mlig455_049628 {REF} {Length: 1589} {NoTransDecoderORF} {RNA1509_4484} {RNA1310_68827} {RNA815_4833.2}
6.	MligTC455_31993	50	1.04	Mlig455_037704, Mlig455_046366, Mlig455_046396	Neo: - Age: Down-Up-Down		0.982	-	-	0.982	-	-	-	Mlig455_037704 {REF} {Length: 3532} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=99.5]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=69.1]} {Dmel: FBgn0029768, SPR, Sex peptide receptor, [RH, Score=159, Expect=1e-43]} {Celegans: WBGene00010986, sprr-1, Sex Peptide Receptor (Drosophila) Related, [RH, Score=162, Expect=7e-44]} {Smed: dd_Smed_v6_14444_0_1, dd_Smed_v6_14444_0_1, [RH, Score=180, Expect=2e-51]} {RNA1310_34449} {RNA815_21312.1} Mlig455_046366 {REF} {Length: 2102} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=99.7]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=67.0]} {Dmel: FBgn0029768, SPR, Sex peptide receptor, [RH, Score=160, Expect=5e-44]} {Celegans: WBGene00010986, sprr-1, Sex Peptide Receptor (Drosophila) Related, [RH, Score=163, Expect=2e-44]} {Smed: dd_Smed_v6_14444_0_1, dd_Smed_v6_14444_0_1, [RH, Score=181, Expect=5e-52]} {RNA1310_34449} {RNA815_21312.1} Mlig455_046396 {REF} {Length: 3850} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=99.5]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=69.1]} {Dmel: FBgn0029768, SPR, Sex peptide receptor, [RH, Score=159, Expect=1e-43]} {Celegans: WBGene00010986, sprr-1, Sex Peptide Receptor (Drosophila) Related, [RH, Score=162, Expect=7e-44]} {Smed: dd_Smed_v6_14444_0_1, dd_Smed_v6_14444_0_1, [RH, Score=180, Expect=2e-51]} {RNA1310_34449} {RNA815_21312.1}
7.	MligTC455_15590	55	1.14	Mlig455_054938	Neo: - Age: Down-Up-Up		0.974	-	-	0.974	-	-	-	Mlig455_054938 {REF} {Length: 3537} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=57.1]} {Celegans: WBGene00007064, 2RSSE.1, [RH, Score=129, Expect=4e-33]} {Smed: dd_Smed_v6_6099_0_1, dd_Smed_v6_6099_0_1, [RH, Score=260, Expect=4e-79]} {RNA1509_9501} {RNA1310_8454, RNA1509_9501} {RNA1509_9501, RNA815_6408}
8.	MligTC455_53395	212	4.42	Mlig455_045892	Neo: - Age: - Region-enriched R8: 3.498/0.00022	NOG	0.973	-	-	0.973	-	-	-	Mlig455_045892 {REF} {Length: 3528} {Pfam: Noggin [PF05806.14, score=86.1]} {Human: ENSG00000183691, NOG, noggin, [Score=77.0, Expect=6e-16]} {Mouse: ENSMUSG00000048616, Nog, noggin, [Score=77.0, Expect=4e-16]} {Smed: dd_Smed_v6_15423_0_1, dd_Smed_v6_15423_0_1, [Score=95.9, Expect=4e-23]} {RNA1509_31636} {RNA1310_18169, RNA1509_31636} {RNA1509_31636, RNA815_13158}
9.	MligTC455_30686	63	1.32	Mlig455_039621	Neo: - Age: logFC(26M/2M)=0.268		0.968	-	-	0.968	-	-	-	Mlig455_039621 {REF} {Length: 3457} {TRANSSPLICED} {RNA1509_47978} {RNA1310_16577.1} {RNA815_31875}
10.	MligTC455_30687	63	1.32	Mlig455_051422	Neo: - Age: -		0.968	-	-	0.968	-	-	-	Mlig455_051422 {REF} {Length: 3419} {RNA1509_47978} {RNA1310_70803} {RNA815_36635}
11.	MligTC455_26169	52	1.09	Mlig455_019582, Mlig455_059116	Neo: - Age: -		0.967	-	-	0.967	-	-	-	Mlig455_019582 {REF} {Length: 1420} {NoTransDecoderORF} {RNA1509_30950} {RNA1310_25397.1} {RNA815_29835} Mlig455_059116 {REF} {Length: 332} {NoTransDecoderORF} {RNA1509_8681} {RNA1310_37013} {RNA815_21585}
12.	MligTC455_22007	102	2.13	Mlig455_031460	Neo: - Age: -	SLC35D1	0.963	-	-	-	-	-	0.963	Mlig455_031460 {REF} {Length: 2339} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=31.1]} {Human: ENSG00000116704, SLC35D1, solute carrier family 35 member D1, [RH, Score=228, Expect=4e-72]} {Mouse: ENSMUSG00000028521, Slc35d1, solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1, [RH, Score=221, Expect=4e-70]} {Dmel: FBgn0042641, frc, fringe connection, [RH, Score=227, Expect=3e-72]} {Celegans: WBGene00005025, sqv-7, UDP-sugar transporter sqv-7, [RH, Score=210, Expect=3e-66]} {Smed: dd_Smed_v6_14554_0_1, dd_Smed_v6_14554_0_1, [RH, Score=204, Expect=4e-64]} {RNA1310_31362} {RNA815_14367}
13.	MligTC455_42958	89	1.86	Mlig455_029219	Neo: - Age: -		0.962	-	-	0.962	-	-	-	Mlig455_029219 {REF} {Length: 1562} {RNA1509_32779} {RNA1310_20140} {RNA815_11665}
14.	MligTC455_48079	53	1.1	Mlig455_041083	Neo: Irradiation Age: Up-Down-Down	DDX60	0.959	-	-	0.959	-	-	-	Mlig455_041083 {REF} {Length: 4159} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=37.3]; Zinc finger, ZZ type [PF00569.19, score=24.1]} {Human: ENSG00000137628, DDX60, DExD/H-box helicase 60, [Score=253, Expect=4e-70]} {Mouse: ENSMUSG00000037921, Ddx60, DEAD (Asp-Glu-Ala-Asp) box polypeptide 60, [Score=238, Expect=2e-65]} {Dmel: FBgn0039117, tst, twister, [Score=84.3, Expect=2e-16]} {Celegans: WBGene00016194, C28H8.3, Uncharacterized helicase C28H8.3, [Score=174, Expect=1e-44]} {Smed: dd_Smed_v6_9055_0_1, dd_Smed_v6_9055_0_1, [Score=79.0, Expect=7e-15]} {RNA1509_2815} {RNA1310_707} {RNA815_269.1}
15.	MligTC455_11852	209	4.36	Mlig455_043128	Neo: Irradiation Age: Up-Down-Down	ANAPC1	0.958	-	-	0.958	-	-	-	Mlig455_043128 {REF} {Length: 8060} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 1 [PF12859.9, score=21.8]} {Human: ENSG00000153107, ANAPC1, anaphase promoting complex subunit 1, [RH, Score=205, Expect=4e-52]} {Mouse: ENSMUSG00000014355, Anapc1, anaphase promoting complex subunit 1, [RH, Score=206, Expect=1e-52]} {Dmel: FBgn0004391, shtd, shattered, [RH, Score=214, Expect=3e-55]} {Celegans: WBGene00003133, mat-2, Anaphase-promoting complex subunit 1, [RH, Score=179, Expect=9e-45]} {Smed: dd_Smed_v6_8329_0_1, dd_Smed_v6_8329_0_1, [RH, Score=162, Expect=1e-40]} {RNA1509_56813, RNA1509_9751} {RNA1310_441.1, RNA1509_56813} {RNA1509_56813, RNA815_441.1}
16.	MligTC455_30364	252	5.25	Mlig455_058073	Neo: - Age: logFC(26M/2M)=0.482		0.954	-	-	-	-	-	0.954	Mlig455_058073 {REF} {Length: 3291} {TRANSSPLICED} {RNA1509_33897} {RNA1310_18647} {RNA815_14645}
17.	MligTC455_05174	15	0.3	Mlig455_040060	Neo: - Age: -	ANGPTL6	0.951	-	-	0.951	-	-	-	Mlig455_040060 {REF} {Length: 1046} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=103.3]} {Human: ENSG00000130812, ANGPTL6, angiopoietin like 6, [Score=96.7, Expect=7e-22]; ENSG00000160339, FCN2, ficolin 2, [Score=95.9, Expect=2e-22]; ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=93.6, Expect=3e-21]} {Mouse: ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=94.0, Expect=4e-21]; ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=94.0, Expect=1e-21]} {Dmel: FBgn0050280, CG30280, [Score=91.7, Expect=2e-21]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=99.4, Expect=3e-23]} {RNA1509_54507} {RNA1310_27399} {RNA815_12335}
18.	MligTC455_05175	15	0.31	Mlig455_040087	Neo: - Age: -	FCN2	0.951	-	-	0.951	-	-	-	Mlig455_040087 {REF} {Length: 1203} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=103.7]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=94.7, Expect=2e-22]; ENSG00000130812, ANGPTL6, angiopoietin like 6, [Score=94.7, Expect=2e-21]; ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=94.0, Expect=2e-21]} {Mouse: ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=92.4, Expect=3e-21]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=92.4, Expect=8e-21]} {Dmel: FBgn0050280, CG30280, [Score=90.1, Expect=6e-21]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=99.8, Expect=2e-23]} {RNA1509_54507} {RNA1310_27399} {RNA815_12335}

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