TomoSeq data search

Data search

Results for MligTC455_37934

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37934

26

0.54

Mlig455_008883, Mlig455_049435

Neo: -

Age: -

Mlig455_008883 {REF} {Length: 548} {Pfam: Homeodomain-like domain [PF13384.8, score=18.9]} {Smed: dd_Smed_v6_65697_0_1, dd_Smed_v6_65697_0_1, [Score=41.6, Expect=1e-05]} {RNA1509_53194} {RNA1310_60636} {RNA815_29520}

Mlig455_049435 {REF} {Length: 838} {NoTransDecoderORF} {RNA1509_53194} {RNA1310_47725} {RNA815_50191}

Cumulative graph for MligTC455_37934

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.206	0.896	0.99976	1.00000
RegionR2	2.172	0.896	0.99985	1.00000
RegionR3	0.146	0.896	0.53535	1.00000
RegionR4	0.015	0.896	0.93170	1.00000
RegionR5	-2.248	0.896	0.97927	1.00000
RegionR6	-1.045	0.896	0.92744	1.00000
RegionR7	1.145	0.896	0.99994	1.00000
RegionR8	1.02	0.896	0.99982	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.667	0.896	0.99984	1.00000
RegenerationR2	4.963	0.896	0.00020	0.01823
RegenerationR3	3.984	0.896	0.00653	0.14692
RegenerationR4	1.984	0.896	0.05538	0.37760
RegenerationR5	3.575	0.896	0.00860	0.16754
RegenerationR6	4.267	0.896	0.01278	0.13938
RegenerationBL	4.175	0.896	0.02006	0.15310
RegenerationTP	5.49	0.896	0.00605	0.13072

Genes with expression patterns similar to MligTC455_37934

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37934	26	0.54	Mlig455_008883, Mlig455_049435	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_008883 {REF} {Length: 548} {Pfam: Homeodomain-like domain [PF13384.8, score=18.9]} {Smed: dd_Smed_v6_65697_0_1, dd_Smed_v6_65697_0_1, [Score=41.6, Expect=1e-05]} {RNA1509_53194} {RNA1310_60636} {RNA815_29520} Mlig455_049435 {REF} {Length: 838} {NoTransDecoderORF} {RNA1509_53194} {RNA1310_47725} {RNA815_50191}
2.	MligTC455_49192	131	2.74	Mlig455_023636	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.515	PITX2	0.981	-	-	-	-	0.981	-	Mlig455_023636 {REF} {Length: 2211} {Pfam: Homeodomain [PF00046.31, score=62.2]} {Human: ENSG00000164093, PITX2, paired like homeodomain 2, [Score=106, Expect=5e-26]; ENSG00000107859, PITX3, paired like homeodomain 3, [Score=105, Expect=9e-26]; ENSG00000069011, PITX1, paired like homeodomain 1, [Score=102, Expect=8e-25]} {Mouse: ENSMUSG00000028023, Pitx2, paired-like homeodomain transcription factor 2, [Score=106, Expect=3e-26]; ENSMUSG00000025229, Pitx3, paired-like homeodomain transcription factor 3, [Score=105, Expect=7e-26]; ENSMUSG00000021506, Pitx1, paired-like homeodomain transcription factor 1, [Score=103, Expect=4e-25]} {Dmel: FBgn0020912, Ptx1, [Score=110, Expect=1e-26]} {Celegans: WBGene00006766, unc-30, Homeobox protein unc-30, [Score=108, Expect=3e-27]} {Smed: dd_Smed_v6_15253_0_1, dd_Smed_v6_15253_0_1, [Score=108, Expect=5e-27]} {RNA1509_46043} {RNA1310_17678} {RNA815_20652}
3.	MligTC455_27193	38	0.8	Mlig455_030171	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_030171 {REF} {Length: 1147} {NoTransDecoderORF} {RNA1509_43103} {RNA1310_34306} {RNA815_26067.1}
4.	MligTC455_14257	69	1.45	Mlig455_040352	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_040352 {REF} {Length: 1357} {RNA1310_29786} {RNA815_30669}
5.	MligTC455_48490	40	0.84	Mlig455_020090	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_020090 {REF} {Length: 2619} {RNA1310_71062} {RNA815_63441}

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