TomoSeq data search

Data search

Results for MligTC455_37943

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37943

108

2.25

Mlig455_070518

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.848

MACF1

Mlig455_070518 {REF} {Length: 6776} {Pfam: SH3 domain [PF17902.3, score=36.7]} {Human: ENSG00000127603, MACF1, microtubule-actin crosslinking factor 1, [Score=63.5, Expect=4e-09]} {Mouse: ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=62.0, Expect=8e-09]} {Dmel: FBgn0013733, shot, short stop, [Score=84.0, Expect=1e-15]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=65.5, Expect=4e-10]} {Smed: dd_Smed_v6_10991_0_1, dd_Smed_v6_10991_0_1, [Score=73.2, Expect=1e-12]} {RNA1509_50153} {RNA1310_6543.1} {RNA815_6208}

Cumulative graph for MligTC455_37943

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.067	2.105	0.99960	1.00000
RegionR2	1.648	2.105	0.17898	0.52886
RegionR3	1.526	2.105	0.19494	0.73315
RegionR4	2.385	2.105	0.04849	0.18892
RegionR5	1.691	2.105	0.13780	0.38093
RegionR6	2.429	2.105	0.02754	0.30506
RegionR7	-3.626	2.105	0.99979	1.00000
RegionR8	-2.986	2.105	0.99988	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.039	2.105	0.99993	1.00000
RegenerationR2	0.141	2.105	0.81117	0.99333
RegenerationR3	0.101	2.105	0.89658	1.00000
RegenerationR4	-0.655	2.105	0.38609	0.80501
RegenerationR5	0.365	2.105	0.58623	0.90347
RegenerationR6	-0.962	2.105	0.17737	0.51091
RegenerationBL	2.683	2.105	0.12051	0.41190
RegenerationTP	5.2	2.105	0.01393	0.20198

Genes with expression patterns similar to MligTC455_37943

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37943	108	2.25	Mlig455_070518	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.848	MACF1	5	-	1.000	1.000	1.000	1.000	1.000	Mlig455_070518 {REF} {Length: 6776} {Pfam: SH3 domain [PF17902.3, score=36.7]} {Human: ENSG00000127603, MACF1, microtubule-actin crosslinking factor 1, [Score=63.5, Expect=4e-09]} {Mouse: ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=62.0, Expect=8e-09]} {Dmel: FBgn0013733, shot, short stop, [Score=84.0, Expect=1e-15]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=65.5, Expect=4e-10]} {Smed: dd_Smed_v6_10991_0_1, dd_Smed_v6_10991_0_1, [Score=73.2, Expect=1e-12]} {RNA1509_50153} {RNA1310_6543.1} {RNA815_6208}
2.	MligTC455_37942	114	2.38	Mlig455_046110	Neo: - Age: -	MACF1	4.719	-	0.998	0.971	0.811	0.958	0.981	Mlig455_046110 {REF} {Length: 8175} {TRANSSPLICED} {Pfam: SH3 domain [PF17902.3, score=37.3]} {Human: ENSG00000127603, MACF1, microtubule-actin crosslinking factor 1, [Score=61.2, Expect=7e-09]} {Mouse: ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=61.2, Expect=6e-09]} {Dmel: FBgn0013733, shot, short stop, [Score=83.2, Expect=7e-16]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=67.0, Expect=5e-11]} {Smed: dd_Smed_v6_10991_0_1, dd_Smed_v6_10991_0_1, [Score=73.9, Expect=2e-13]} {RNA1509_19334} {RNA1310_6543.1} {RNA815_878}
3.	MligTC455_23490	367	7.64	Mlig455_019595	Neo: - Age: Up-Down-Down		0.967	-	-	-	-	0.967	-	Mlig455_019595 {REF} {Length: 1836} {NoTransDecoderORF} {RNA1509_20980} {RNA1310_8876.1, RNA1509_20980} {RNA1509_20980, RNA815_13562.1}
4.	MligTC455_18581	359	7.49	Mlig455_043904	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_043904 {REF} {Length: 1673} {TRANSSPLICED} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=22.6]} {RNA1509_30040} {RNA1310_17635.1, RNA1509_30040} {RNA1509_30040, RNA815_27521}
5.	MligTC455_39124	660	13.75	Mlig455_054446	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.887	MAP3K19	0.957	-	-	-	0.957	-	-	Mlig455_054446 {REF} {Length: 5015} {Pfam: Protein kinase domain [PF00069.27, score=191.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=128.5]; Ankyrin repeats (3 copies) [PF12796.9, score=65.5]; Ankyrin repeats (many copies) [PF13637.8, score=63.6]; Ankyrin repeats (many copies) [PF13857.8, score=62.0]; Ankyrin repeat [PF00023.32, score=52.4]; Ankyrin repeat [PF13606.8, score=49.3]; Phosphotransferase enzyme family [PF01636.25, score=31.3]; Fungal protein kinase [PF17667.3, score=28.4]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=22.8]; ABC1 atypical kinase-like domain [PF03109.18, score=20.1]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=251, Expect=1e-67]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=253, Expect=2e-68]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=146, Expect=7e-36]} {Celegans: WBGene00016038, cst-2, Caenorhabditis STE20-like kinase, [Score=158, Expect=2e-41]} {Smed: dd_Smed_v6_10339_0_1, dd_Smed_v6_10339_0_1, [Score=226, Expect=3e-61]} {RNA1509_40012, RNA1509_8258} {RNA1310_1436.1, RNA1509_40012} {RNA1509_40012, RNA815_1740}
6.	MligTC455_24781	664	13.83	Mlig455_056890	Neo: - Age: -	TTLL3	0.954	-	-	-	0.954	-	-	Mlig455_056890 {REF} {Length: 4523} {TRANSSPLICED} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=246.0]; YheC/D like ATP-grasp [PF14398.8, score=22.3]} {Human: ENSG00000214021, TTLL3, tubulin tyrosine ligase like 3, [Score=419, Expect=7e-138]; ENSG00000138892, TTLL8, tubulin tyrosine ligase like 8, [Score=417, Expect=5e-133]} {Mouse: ENSMUSG00000030276, Ttll3, tubulin tyrosine ligase-like family, member 3, [Score=451, Expect=3e-145]; ENSMUSG00000022388, Ttll8, tubulin tyrosine ligase-like family, member 8, [Score=434, Expect=8e-140]} {Dmel: FBgn0031854, TTLL3A, Tubulin tyrosine ligase-like 3A, [Score=267, Expect=2e-76]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [Score=113, Expect=1e-26]} {Smed: dd_Smed_v6_10244_0_3, dd_Smed_v6_10244_0_3, [Score=549, Expect=0.0]} {RNA1509_39964, RNA1509_51119, RNA1509_8170} {RNA1310_3822, RNA1509_39964, RNA1509_51119} {RNA1509_39964, RNA1509_51119, RNA815_867}
7.	MligTC455_32957	1141	23.76	Mlig455_070605	Neo: - Age: -	PNPLA6	0.953	-	-	-	0.953	-	-	Mlig455_070605 {REF} {Length: 2477} {Pfam: Patatin-like phospholipase [PF01734.24, score=81.3]} {Human: ENSG00000032444, PNPLA6, patatin like phospholipase domain containing 6, [Score=425, Expect=6e-135]; ENSG00000130653, PNPLA7, patatin like phospholipase domain containing 7, [Score=404, Expect=4e-127]} {Mouse: ENSMUSG00000004565, Pnpla6, patatin-like phospholipase domain containing 6, [Score=421, Expect=9e-134]; ENSMUSG00000036833, Pnpla7, patatin-like phospholipase domain containing 7, [Score=405, Expect=1e-127]} {Dmel: FBgn0003656, sws, swiss cheese, [Score=393, Expect=8e-123]} {Celegans: WBGene00022718, ZK370.4, Uncharacterized NTE family protein ZK370.4, [Score=338, Expect=2e-103]} {Smed: dd_Smed_v6_11184_0_2, dd_Smed_v6_11184_0_2, [Score=439, Expect=3e-140]} {RNA1509_9455} {RNA1310_948.1} {RNA815_235.1}
8.	MligTC455_24358	1408	29.33	Mlig455_061458	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.360 Region-enriched R2: 1.380/0.00130		0.952	-	-	-	0.952	-	-	Mlig455_061458 {REF} {Length: 2548} {Pfam: Domain of unknown function (DUF4476) [PF14771.8, score=33.9]} {Smed: dd_Smed_v6_3608_0_1, dd_Smed_v6_3608_0_1, [RH, Score=174, Expect=1e-53]} {RNA1509_47786} {RNA1310_25127} {RNA815_10915.2}
9.	MligTC455_32956	1141	23.76	Mlig455_051391	Neo: - Age: -	PNPLA7	0.952	-	-	-	0.952	-	-	Mlig455_051391 {REF} {Length: 5298} {TRANSSPLICED} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=139.3]; Patatin-like phospholipase [PF01734.24, score=78.2]} {Human: ENSG00000130653, PNPLA7, patatin like phospholipase domain containing 7, [RH, Score=926, Expect=0.0]; ENSG00000032444, PNPLA6, patatin like phospholipase domain containing 6, [RH, Score=894, Expect=0.0]} {Mouse: ENSMUSG00000036833, Pnpla7, patatin-like phospholipase domain containing 7, [RH, Score=911, Expect=0.0]} {Dmel: FBgn0003656, sws, swiss cheese, [RH, Score=823, Expect=0.0]} {Celegans: WBGene00022718, ZK370.4, Uncharacterized NTE family protein ZK370.4, [RH, Score=591, Expect=0.0]} {Smed: dd_Smed_v6_11184_0_1, dd_Smed_v6_11184_0_1, [RH, Score=827, Expect=0.0]} {RNA1509_28533, RNA1509_4301, RNA1509_9455} {RNA1310_948.1, RNA1509_28533, RNA1509_4301, RNA1509_9455} {RNA1509_28533, RNA1509_4301, RNA1509_9455, RNA815_235.1}
10.	MligTC455_30865	559	11.65	Mlig455_050410	Neo: - Age: logFC(26M/2M)=-0.223		0.951	-	-	-	0.951	-	-	Mlig455_050410 {REF} {Length: 2602} {TRANSSPLICED} {RNA1509_18063} {RNA1310_7936.1, RNA1509_18063} {RNA1509_18063, RNA815_2370.1}

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