TomoSeq data search

Data search

Results for MligTC455_37994

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37994

20

0.42

Mlig455_035678, Mlig455_035987

Neo: -

Age: -

PRR9

Mlig455_035678 {REF} {Length: 2541} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=3e-06]} {RNA1310_15743} {RNA815_23851}

Mlig455_035987 {REF} {Length: 2396} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.2, Expect=9e-07]} {RNA1310_17667} {RNA815_53757}

Cumulative graph for MligTC455_37994

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.979	0.79	0.99993	1.00000
RegionR2	2.293	0.79	1.00000	1.00000
RegionR3	0.214	0.79	1.00000	1.00000
RegionR4	-2.273	0.79	0.99987	1.00000
RegionR5	-0.685	0.79	0.99986	1.00000
RegionR6	0.196	0.79	0.99984	1.00000
RegionR7	0.981	0.79	0.99990	1.00000
RegionR8	1.254	0.79	0.99984	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.261	0.79	1.00000	1.00000
RegenerationR2	2.411	0.79	0.10985	0.51869
RegenerationR3	4.235	0.79	0.05657	0.40817
RegenerationR4	3.816	0.79	0.05497	0.37656
RegenerationR5	3.666	0.79	0.04937	0.35854
RegenerationR6	5.695	0.79	0.02857	0.21084
RegenerationBL	1.913	0.79	0.19921	0.53691
RegenerationTP	2.253	0.79	0.22915	0.67383

Genes with expression patterns similar to MligTC455_37994

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37994	20	0.42	Mlig455_035678, Mlig455_035987	Neo: - Age: -	PRR9	1	-	-	-	-	1.000	-	Mlig455_035678 {REF} {Length: 2541} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=3e-06]} {RNA1310_15743} {RNA815_23851} Mlig455_035987 {REF} {Length: 2396} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.2, Expect=9e-07]} {RNA1310_17667} {RNA815_53757}
2.	MligTC455_26573	296	6.16	Mlig455_060411	Neo: - Age: logFC(26M/2M)=0.907	TRDMT1	0.964	-	-	-	-	0.964	-	Mlig455_060411 {REF} {Length: 1378} {TRANSSPLICED} {Pfam: C-5 cytosine-specific DNA methylase [PF00145.19, score=99.7]} {Human: ENSG00000107614, TRDMT1, tRNA aspartic acid methyltransferase 1, [RH, Score=215, Expect=3e-65]} {Mouse: ENSMUSG00000026723, Trdmt1, tRNA aspartic acid methyltransferase 1, [RH, Score=207, Expect=4e-62]} {Dmel: FBgn0028707, Mt2, Methyltransferase 2, [RH, Score=183, Expect=7e-54]} {Smed: dd_Smed_v6_10483_0_4, dd_Smed_v6_10483_0_4, [RH, Score=223, Expect=3e-69]} {RNA1509_46477} {RNA1310_22709, RNA1509_46477} {RNA1509_46477, RNA815_19240}
3.	MligTC455_09440	24	0.5	Mlig455_006762	Neo: Int S/G2/M Age: -		0.957	-	-	-	-	0.957	-	Mlig455_006762 {REF} {Length: 2470} {RNA1310_84650}
4.	MligTC455_30868	86	1.8	Mlig455_007682, Mlig455_020997	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_007682 {REF} {Length: 3292} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=45.5]; Ankyrin repeat [PF13606.8, score=36.3]; Ankyrin repeat [PF00023.32, score=35.1]; Ankyrin repeats (many copies) [PF13637.8, score=26.8]; Ankyrin repeats (many copies) [PF13857.8, score=26.3]} {RNA1509_14810} {RNA1310_3488.1, RNA1509_14810} {RNA1509_14810, RNA815_6042.1} Mlig455_020997 {REF} {Length: 4389} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=45.5]; Ankyrin repeat [PF13606.8, score=36.3]; Ankyrin repeat [PF00023.32, score=35.1]; Ankyrin repeats (many copies) [PF13637.8, score=26.8]; Ankyrin repeats (many copies) [PF13857.8, score=26.3]} {RNA1509_14810} {RNA1310_3488.1} {RNA815_6042.1}
5.	MligTC455_31054	61	1.27	Mlig455_058350	Neo: - Age: logFC(26M/2M)=-0.322 Region-enriched R4: 3.600/0.01937 Region-enriched R5: 3.000/0.03553		0.955	-	-	-	-	0.955	-	Mlig455_058350 {REF} {Length: 677} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_4897} {RNA1310_23908} {RNA815_19313}

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