Data search
Results for MligTC455_38000
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38000 | 152 | 3.16 | Mlig455_032795 | Neo: - Age: Up-Down-Up Region-enriched R8: 2.697/0.04043 Regeneration-downregulated TP: -7.272 Regeneration-depleted TP: -7.272 |
Mlig455_032795 {REF} {Length: 3332} {Pfam: Glycine rich protein [PF12810.9, score=27.1]} {RNA1509_54003, RNA1509_60023} {RNA1310_24062, RNA1509_54003, RNA1509_60023} {RNA1509_54003, RNA1509_60023, RNA815_19760} |
Cumulative graph for MligTC455_38000
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.032 | 1.978 | 0.92815 | 1.00000 | |
| RegionR2 | 0.671 | 1.978 | 0.35927 | 0.75398 | |
| RegionR3 | -0.612 | 1.978 | 0.23763 | 0.77922 | |
| RegionR4 | -2.563 | 1.978 | 0.00344 | 0.02714 | |
| RegionR5 | -2.502 | 1.978 | 0.00004 | 0.00075 | |
| RegionR6 | -0.345 | 1.978 | 0.52265 | 1.00000 | |
| RegionR7 | 2.686 | 1.978 | 0.00007 | 0.00402 | |
| RegionR8 | 2.697 | 1.978 | 0.00082 | 0.04043 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.384 | 1.978 | 0.48336 | 1.00000 | |
| RegenerationR2 | -2.24 | 1.978 | 0.01405 | 0.19378 | |
| RegenerationR3 | -0.284 | 1.978 | 0.74818 | 0.96399 | |
| RegenerationR4 | -1.041 | 1.978 | 0.24608 | 0.69415 | |
| RegenerationR5 | -0.903 | 1.978 | 0.26407 | 0.69551 | |
| RegenerationR6 | -5.08 | 1.978 | 0.00029 | 0.01672 | |
| RegenerationBL | -2.219 | 1.978 | 0.03837 | 0.22210 | |
| RegenerationTP | -7.272 | 1.978 | 0.00001 | 0.00291 | Specific for TP: -7.272 |
Genes with expression patterns similar to MligTC455_38000
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38000 | 152 | 3.16 | Mlig455_032795 | Neo: - Age: Up-Down-Up Region-enriched R8: 2.697/0.04043 Regeneration-downregulated TP: -7.272 Regeneration-depleted TP: -7.272 |
4 | 1.000 | 1.000 | - | - | 1.000 | 1.000 | Mlig455_032795 {REF} {Length: 3332} {Pfam: Glycine rich protein [PF12810.9, score=27.1]} {RNA1509_54003, RNA1509_60023} {RNA1310_24062, RNA1509_54003, RNA1509_60023} {RNA1509_54003, RNA1509_60023, RNA815_19760} | |
| 2. | MligTC455_40049 | 166 | 3.45 | Mlig455_017607, Mlig455_058891 | Neo: Irradiation Age: Up-Down-Down |
PBRM1 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_017607 {REF} {Length: 435} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=322.4]; BAH domain [PF01426.20, score=99.5]; HMG (high mobility group) box [PF00505.21, score=47.2]; HMG-box domain [PF09011.12, score=36.8]} {Human: ENSG00000163939, PBRM1, polybromo 1, [RH, Score=522, Expect=3e-155]} {Mouse: ENSMUSG00000042323, Pbrm1, polybromo 1, [RH, Score=525, Expect=9e-156]} {Dmel: FBgn0039227, polybromo, [RH, Score=413, Expect=4e-118]} {Celegans: WBGene00007042, pbrm-1, PolyBRoMo domain containing, [RH, Score=331, Expect=2e-91]} {Smed: dd_Smed_v6_4218_0_1, dd_Smed_v6_4218_0_1, [Score=665, Expect=0.0]} {RNA1509_5406} {RNA1310_1358} {RNA815_29359} Mlig455_058891 {REF} {Length: 6537} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=322.4]; BAH domain [PF01426.20, score=99.5]; HMG (high mobility group) box [PF00505.21, score=47.2]; HMG-box domain [PF09011.12, score=36.8]} {Human: ENSG00000163939, PBRM1, polybromo 1, [RH, Score=522, Expect=3e-155]} {Mouse: ENSMUSG00000042323, Pbrm1, polybromo 1, [RH, Score=525, Expect=9e-156]} {Dmel: FBgn0039227, polybromo, [RH, Score=413, Expect=4e-118]} {Celegans: WBGene00007042, pbrm-1, PolyBRoMo domain containing, [RH, Score=331, Expect=2e-91]} {Smed: dd_Smed_v6_4218_0_1, dd_Smed_v6_4218_0_1, [Score=665, Expect=0.0]} {RNA1509_5406} {RNA1310_918.1} {RNA815_609.1} |
| 3. | MligTC455_36198 | 102 | 2.13 | Mlig455_061010 | Neo: - Age: - |
TNS1 | 0.955 | 0.955 | - | - | - | - | - | Mlig455_061010 {REF} {Length: 1601} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=49.9]; SH2 domain [PF00017.26, score=30.3]} {Human: ENSG00000079308, TNS1, tensin 1, [Score=155, Expect=5e-42]; ENSG00000136205, TNS3, tensin 3, [Score=151, Expect=2e-40]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [Score=155, Expect=2e-42]; ENSMUSG00000020422, Tns3, tensin 3, [Score=154, Expect=1e-41]} {Dmel: FBgn0000244, by, blistery, [Score=150, Expect=8e-41]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=164, Expect=2e-48]} {Smed: dd_Smed_v6_4454_0_5, dd_Smed_v6_4454_0_5, [Score=153, Expect=5e-45]} {RNA1509_28824} {RNA1310_20281} {RNA815_21042} |
| 4. | MligTC455_51381 | 347 | 7.23 | Mlig455_024564 | Neo: - Age: Down-Up-Down |
0.953 | 0.953 | - | - | - | - | - | Mlig455_024564 {REF} {Length: 1946} {Smed: dd_Smed_v6_14508_0_1, dd_Smed_v6_14508_0_1, [RH, Score=73.2, Expect=7e-15]} {RNA1509_27432} {RNA1310_25177} {RNA815_20912} |