M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_36198

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36198 102 2.13 Mlig455_061010

Neo: -

Age: -

 TNS1 Mlig455_061010 {REF} {Length: 1601} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=49.9]; SH2 domain [PF00017.26, score=30.3]} {Human: ENSG00000079308, TNS1, tensin 1, [Score=155, Expect=5e-42]; ENSG00000136205, TNS3, tensin 3, [Score=151, Expect=2e-40]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [Score=155, Expect=2e-42]; ENSMUSG00000020422, Tns3, tensin 3, [Score=154, Expect=1e-41]} {Dmel: FBgn0000244, by, blistery, [Score=150, Expect=8e-41]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=164, Expect=2e-48]} {Smed: dd_Smed_v6_4454_0_5, dd_Smed_v6_4454_0_5, [Score=153, Expect=5e-45]} {RNA1509_28824} {RNA1310_20281} {RNA815_21042}

Cumulative graph for MligTC455_36198

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.329 1.67 0.24444 0.89026
RegionR2 1.908 1.67 0.10823 0.40603
RegionR3 0.634 1.67 0.50529 0.99686
RegionR4 -1.221 1.67 0.99504 1.00000
RegionR5 -1.258 1.67 0.99454 1.00000
RegionR6 0.122 1.67 0.81297 1.00000
RegionR7 2.21 1.67 0.04563 0.41096
RegionR8 2.934 1.67 0.01422 0.23155

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.803 1.67 0.99974 1.00000
RegenerationR2 1.725 1.67 0.03748 0.31927
RegenerationR3 1.742 1.67 0.05480 0.40237
RegenerationR4 1.275 1.67 0.21908 0.66686
RegenerationR5 1.107 1.67 0.23257 0.66595
RegenerationR6 2.505 1.67 0.01443 0.14808
RegenerationBL 1.533 1.67 0.21272 0.55686
RegenerationTP 0.67 1.67 0.45239 0.86896


Genes with expression patterns similar to MligTC455_36198

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36198 102 2.13 Mlig455_061010

Neo: -

Age: -

 TNS1 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_061010 {REF} {Length: 1601} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=49.9]; SH2 domain [PF00017.26, score=30.3]} {Human: ENSG00000079308, TNS1, tensin 1, [Score=155, Expect=5e-42]; ENSG00000136205, TNS3, tensin 3, [Score=151, Expect=2e-40]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [Score=155, Expect=2e-42]; ENSMUSG00000020422, Tns3, tensin 3, [Score=154, Expect=1e-41]} {Dmel: FBgn0000244, by, blistery, [Score=150, Expect=8e-41]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=164, Expect=2e-48]} {Smed: dd_Smed_v6_4454_0_5, dd_Smed_v6_4454_0_5, [Score=153, Expect=5e-45]} {RNA1509_28824} {RNA1310_20281} {RNA815_21042}
2. MligTC455_36197 92 1.91 Mlig455_053513

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.446

 TNS1 4.901 0.985 0.991 - 0.931 0.996 0.998 Mlig455_053513 {REF} {Length: 3575} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=47.7]; SH2 domain [PF00017.26, score=40.2]} {Human: ENSG00000079308, TNS1, tensin 1, [Score=177, Expect=7e-45]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [Score=176, Expect=8e-45]; ENSMUSG00000020422, Tns3, tensin 3, [Score=169, Expect=9e-43]} {Dmel: FBgn0000244, by, blistery, [Score=166, Expect=2e-42]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=181, Expect=5e-51]} {Smed: dd_Smed_v6_4494_0_2, dd_Smed_v6_4494_0_2, [Score=181, Expect=5e-48]} {RNA1509_28824, RNA1509_50496} {RNA1310_7318, RNA1509_28824, RNA1509_50496} {RNA1509_28824, RNA1509_50496, RNA815_6926}
3. MligTC455_36309 659 13.73 Mlig455_000959

Neo: -

Age: -

 1.819 0.952 - - - - 0.867 Mlig455_000959 {REF} {Length: 2183} {Pfam: PH domain [PF00169.31, score=24.8]} {RNA1509_27870} {RNA1310_17063.3} {RNA815_9359.1}
4. MligTC455_36274 15 0.31 Mlig455_008085

Neo: -

Age: -

 0.992 - - - - 0.992 - Mlig455_008085 {REF} {Length: 2167} {NoTransDecoderORF} {RNA1509_32205} {RNA1310_64038} {RNA815_49379}
5. MligTC455_36784 15 0.3 Mlig455_046783, Mlig455_069957

Neo: -

Age: logFC(26M/2M)=-0.515

 0.992 - - - - 0.992 -

Mlig455_046783 {REF} {Length: 1605} {RNA1509_14365} {RNA1310_13117.2} {RNA815_6458.1}

Mlig455_069957 {REF} {Length: 1377} {RNA1509_14365} {RNA1310_13117.4} {RNA815_6458.1}
6. MligTC455_17759 25 0.53 Mlig455_032815

Neo: -

Age: Up-Up-Down

 0.991 - - - - 0.991 - Mlig455_032815 {REF} {Length: 1891} {Pfam: Protein of unknown function (DUF2673) [PF10880.10, score=53.5]} {RNA1509_57582} {RNA1310_49538.1, RNA1509_57582}
7. MligTC455_00744 5 0.11 Mlig455_027706

Neo: -

Age: -

 0.99 - - - - 0.990 - Mlig455_027706 {REF} {Length: 520} {NoTransDecoderORF} {RNA1310_47876.2} {RNA815_62057}
8. MligTC455_25562 10 0.21 Mlig455_042405

Neo: -

Age: -

 KREMEN2 0.981 - - - - 0.981 - Mlig455_042405 {REF} {Length: 2000} {TRANSSPLICED} {Pfam: WSC domain [PF01822.21, score=47.2]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=48.1, Expect=5e-06]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=47.4, Expect=6e-06]} {RNA1509_39834} {RNA1310_29401} {RNA815_27180}
9. MligTC455_50866 73 1.53 Mlig455_052918

Neo: Int S/G2/M

Age: -

 0.98 - - - - 0.980 - Mlig455_052918 {REF} {Length: 3299} {RNA1509_20768} {RNA1310_18267} {RNA815_37080}
10. MligTC455_25597 15 0.32 Mlig455_042454

Neo: -

Age: -

 0.977 - - - - 0.977 - Mlig455_042454 {REF} {Length: 1742} {NoTransDecoderORF} {RNA1310_68055}
11. MligTC455_11966 21 0.44 Mlig455_048087

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_048087 {REF} {Length: 791} {RNA1509_15570} {RNA1310_9037} {RNA815_62132}
12. MligTC455_29853 45 0.94 Mlig455_026579, Mlig455_044780, Mlig455_054135

Neo: -

Age: -

 0.972 - - - - 0.972 -

Mlig455_026579 {REF} {Length: 430} {RNA1310_43414}

Mlig455_044780 {REF} {Length: 430} {RNA1310_43414}

Mlig455_054135 {REF} {Length: 4050} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=27.4]} {RNA1509_13774} {RNA1310_6053.2} {RNA815_16908}
13. MligTC455_13329 95 1.98 Mlig455_009198

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.124

 0.971 - - - - - 0.971 Mlig455_009198 {REF} {Length: 2007} {RNA1509_22077, RNA1509_32545} {RNA1310_29047.1, RNA1509_22077, RNA1509_32545} {RNA1509_22077, RNA1509_32545, RNA815_17550}
14. MligTC455_38165 21 0.43 Mlig455_027222, Mlig455_050651

Neo: -

Age: Up-Down-Down

 PKD2L1 0.967 - - - - 0.967 -

Mlig455_027222 {REF} {Length: 15740} {Pfam: REJ domain [PF02010.17, score=173.3]; Polycystin cation channel [PF08016.14, score=169.4]; F5/8 type C domain [PF00754.27, score=57.4]} {Human: ENSG00000107593, PKD2L1, polycystin 2 like 1, transient receptor potential cation channel, [Score=120, Expect=2e-26]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=142, Expect=8e-33]} {Dmel: FBgn0040333, brv3, brivido-3, [Score=67.0, Expect=3e-10]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=133, Expect=3e-30]} {Smed: dd_Smed_v6_13975_0_1, dd_Smed_v6_13975_0_1, [Score=173, Expect=1e-42]} {RNA1509_58823} {RNA1310_23140.1} {RNA815_23466}

Mlig455_050651 {REF} {Length: 4376} {Pfam: F5/8 type C domain [PF00754.27, score=55.0]; Lectin C-type domain [PF00059.23, score=21.4]} {RNA1509_58823} {RNA1310_38951} {RNA815_44024}
15. MligTC455_27211 14 0.29 Mlig455_024750

Neo: -

Age: Down-Up-Down

 0.966 - - - - 0.966 - Mlig455_024750 {REF} {Length: 887} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_15620} {RNA815_11419.1}
16. MligTC455_28686 23 0.47 Mlig455_011407

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_011407 {REF} {Length: 383} {TRANSSPLICED} {RNA1509_35740} {RNA1310_43519} {RNA815_21134}
17. MligTC455_31793 17 0.36 Mlig455_026274

Neo: -

Age: Up-Down-Up

Region-enriched R4: 5.540/0.02199

 TRIM3 0.966 - - - - 0.966 - Mlig455_026274 {REF} {Length: 2070} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=28.5]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=62.0, Expect=2e-09]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=62.0, Expect=2e-09]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=62.0, Expect=1e-09]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=62.0, Expect=1e-09]} {Dmel: FBgn0265356, tn, thin, [Score=57.4, Expect=3e-08]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.5}
18. MligTC455_39586 18 0.38 Mlig455_048851

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_048851 {REF} {Length: 1847} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_17069.1}
19. MligTC455_51935 200 4.16 Mlig455_036791

Neo: -

Age: -

 CMPK1 0.965 - - - - 0.965 - Mlig455_036791 {REF} {Length: 1554} {Pfam: Adenylate kinase [PF00406.24, score=105.0]; AAA domain [PF13207.8, score=67.2]; AAA domain [PF13238.8, score=20.3]} {Human: ENSG00000162368, CMPK1, cytidine/uridine monophosphate kinase 1, [Score=149, Expect=8e-44]} {Mouse: ENSMUSG00000028719, Cmpk1, cytidine monophosphate (UMP-CMP) kinase 1, [Score=150, Expect=3e-44]} {Dmel: FBgn0028833, Dak1, [Score=143, Expect=3e-41]} {Celegans: WBGene00007812, C29F7.3, UMP-CMP kinase 1, [Score=137, Expect=4e-40]} {Smed: dd_Smed_v6_3353_0_1, dd_Smed_v6_3353_0_1, [Score=132, Expect=9e-38]} {RNA1509_39811} {RNA1310_32882, RNA1509_39811} {RNA1509_39811, RNA815_17820.1}
20. MligTC455_13116 127 2.64 Mlig455_040518

Neo: -

Age: Up-Down-Down

 0.964 - - - - 0.964 - Mlig455_040518 {REF} {Length: 2655} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3472) [PF11958.10, score=68.3]; Ricin-type beta-trefoil lectin domain-like [PF14200.8, score=27.6]; Ricin-type beta-trefoil lectin domain [PF00652.24, score=23.9]} {RNA1509_20982, RNA1509_58263} {RNA1310_18012.1, RNA1509_20982} {RNA1509_20982, RNA815_10798}
21. MligTC455_01128 10 0.2 Mlig455_011548

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_011548 {REF} {Length: 414} {NoTransDecoderORF} {RNA1509_48793} {RNA1310_50509} {RNA815_52211}
22. MligTC455_01226 14 0.3 Mlig455_018203

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_018203 {REF} {Length: 673} {NoTransDecoderORF} {RNA1509_35533} {RNA1310_93416} {RNA815_17588}
23. MligTC455_47805 309 6.43 Mlig455_002866, Mlig455_033201

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.570

 NR2C2 0.959 - - - - 0.959 -

Mlig455_002866 {REF} {Length: 2397} {RNA1509_25172} {RNA1310_17963.1} {RNA815_11681}

Mlig455_033201 {REF} {Length: 2405} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=86.4]} {Human: ENSG00000177463, NR2C2, nuclear receptor subfamily 2 group C member 2, [Score=90.5, Expect=1e-18]; ENSG00000120798, NR2C1, nuclear receptor subfamily 2 group C member 1, [Score=87.8, Expect=4e-18]; ENSG00000101076, HNF4A, hepatocyte nuclear factor 4 alpha, [Score=87.4, Expect=7e-18]; ENSG00000113580, NR3C1, nuclear receptor subfamily 3 group C member 1, [Score=87.4, Expect=2e-17]; ENSG00000175745, NR2F1, nuclear receptor subfamily 2 group F member 1, [Score=87.0, Expect=6e-18]; ENSG00000160113, NR2F6, nuclear receptor subfamily 2 group F member 6, [Score=86.7, Expect=9e-18]; ENSG00000151623, NR3C2, nuclear receptor subfamily 3 group C member 2, [Score=86.7, Expect=3e-17]} {Mouse: ENSMUSG00000005893, Nr2c2, nuclear receptor subfamily 2, group C, member 2, [Score=88.2, Expect=5e-18]; ENSMUSG00000017950, Hnf4a, hepatic nuclear factor 4, alpha, [Score=88.2, Expect=3e-18]; ENSMUSG00000069171, Nr2f1, nuclear receptor subfamily 2, group F, member 1, [Score=87.0, Expect=5e-18]; ENSMUSG00000031618, Nr3c2, nuclear receptor subfamily 3, group C, member 2, [Score=87.0, Expect=1e-17]; ENSMUSG00000005897, Nr2c1, nuclear receptor subfamily 2, group C, member 1, [Score=86.7, Expect=1e-17]; ENSMUSG00000002393, Nr2f6, nuclear receptor subfamily 2, group F, member 6, [Score=85.9, Expect=9e-18]; ENSMUSG00000030551, Nr2f2, nuclear receptor subfamily 2, group F, member 2, [Score=85.1, Expect=2e-17]; ENSMUSG00000023034, Nr4a1, nuclear receptor subfamily 4, group A, member 1, [Score=85.1, Expect=4e-17]; ENSMUSG00000024431, Nr3c1, nuclear receptor subfamily 3, group C, member 1, [Score=85.1, Expect=5e-17]; ENSMUSG00000026398, Nr5a2, nuclear receptor subfamily 5, group A, member 2, [Score=84.3, Expect=7e-17]} {Dmel: FBgn0264562, Hr4, Hormone receptor 4, [Score=96.3, Expect=1e-20]} {Celegans: WBGene00003681, nhr-91, Nuclear hormone receptor family member nhr-91, [Score=89.7, Expect=5e-19]} {Smed: dd_Smed_v6_33286_0_2, dd_Smed_v6_33286_0_2, [Score=86.7, Expect=6e-19]} {RNA1509_25172} {RNA1310_17963.1, RNA1509_25172} {RNA1509_25172, RNA815_11681}
24. MligTC455_01448 15 0.31 Mlig455_063614

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_063614 {REF} {Length: 27} {TRANSSPLICED} {NoTransDecoderORF}
25. MligTC455_36850 102 2.12 Mlig455_061130

Neo: -

Age: -

 RHBDF2 0.957 - - - - 0.957 - Mlig455_061130 {REF} {Length: 6350} {TRANSSPLICED} {Pfam: Rhomboid family [PF01694.24, score=74.1]} {Human: ENSG00000129667, RHBDF2, rhomboid 5 homolog 2, [RH, Score=362, Expect=7e-112]; ENSG00000007384, RHBDF1, rhomboid 5 homolog 1, [RH, Score=360, Expect=5e-111]} {Mouse: ENSMUSG00000020806, Rhbdf2, rhomboid 5 homolog 2, [RH, Score=366, Expect=1e-113]} {Dmel: FBgn0041723, rho-5, rhomboid-5, [RH, Score=309, Expect=2e-89]} {Celegans: WBGene00004403, rom-4, Rhomboid-like protein, [RH, Score=313, Expect=2e-91]} {Smed: dd_Smed_v6_11534_0_2, dd_Smed_v6_11534_0_2, [RH, Score=410, Expect=3e-132]} {RNA1509_18207} {RNA1310_7108} {RNA815_9193}
26. MligTC455_16691 57 1.18 Mlig455_018665

Neo: -

Age: -

Region-enriched R8: 7.774/0.00104
Region-enriched R7: 6.459/0.00277

 0.956 - - - - 0.956 - Mlig455_018665 {REF} {Length: 709} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_77757} {RNA815_23623}
27. MligTC455_38121 24 0.5 Mlig455_043084

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_043084 {REF} {Length: 3258} {NoTransDecoderORF} {RNA1509_41513} {RNA1310_17939.1, RNA1509_41513} {RNA1509_41513, RNA815_16258}
28. MligTC455_38000 152 3.16 Mlig455_032795

Neo: -

Age: Up-Down-Up

Region-enriched R8: 2.697/0.04043
Region-enriched R7: 2.686/0.00402

Regeneration-downregulated TP: -7.272

Regeneration-depleted TP: -7.272

 0.955 0.955 - - - - - Mlig455_032795 {REF} {Length: 3332} {Pfam: Glycine rich protein [PF12810.9, score=27.1]} {RNA1509_54003, RNA1509_60023} {RNA1310_24062, RNA1509_54003, RNA1509_60023} {RNA1509_54003, RNA1509_60023, RNA815_19760}
29. MligTC455_14603 15 0.31 Mlig455_012376

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_012376 {REF} {Length: 271} {NoTransDecoderORF}
30. MligTC455_13417 13 0.26 Mlig455_009840, Mlig455_010346

Neo: -

Age: -

 0.953 - - - - 0.953 -

Mlig455_009840 {REF} {Length: 1027} {NoTransDecoderORF} {RNA1310_124106} {RNA815_30229.1}

Mlig455_010346 {REF} {Length: 658} {NoTransDecoderORF} {RNA1310_124106} {RNA815_30229.1}
31. MligTC455_23553 165 3.44 Mlig455_020966

Neo: -

Age: -

 CSNK1G1 0.953 - - - - 0.953 - Mlig455_020966 {REF} {Length: 3985} {Pfam: Protein kinase domain [PF00069.27, score=100.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=54.6]; Fungal protein kinase [PF17667.3, score=29.0]} {Human: ENSG00000169118, CSNK1G1, casein kinase 1 gamma 1, [RH, Score=529, Expect=0.0]; ENSG00000151292, CSNK1G3, casein kinase 1 gamma 3, [RH, Score=521, Expect=0.0]; ENSG00000133275, CSNK1G2, casein kinase 1 gamma 2, [RH, Score=514, Expect=5e-180]} {Mouse: ENSMUSG00000032384, Csnk1g1, casein kinase 1, gamma 1, [RH, Score=538, Expect=0.0]; ENSMUSG00000073563, Csnk1g3, casein kinase 1, gamma 3, [RH, Score=513, Expect=1e-179]} {Dmel: FBgn0250823, gish, gilgamesh, [RH, Score=514, Expect=9e-180]} {Celegans: WBGene00013709, csnk-1, Casein kinase I gamma, [RH, Score=513, Expect=2e-180]} {Smed: dd_Smed_v6_8508_0_2, dd_Smed_v6_8508_0_2, [RH, Score=464, Expect=3e-161]} {RNA1509_20026} {RNA1310_20582.1} {RNA815_13120.1}
32. MligTC455_24612 12 0.25 Mlig455_000425, Mlig455_000489, Mlig455_000526, Mlig455_024858

Neo: -

Age: -

 SCN1A 0.953 - - - - 0.953 -

Mlig455_000425 {REF} {Length: 2186} {Pfam: Ion transport protein [PF00520.33, score=296.1]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=31.9]; Polycystin cation channel [PF08016.14, score=23.2]} {Human: ENSG00000144285, SCN1A, sodium voltage-gated channel alpha subunit 1, [Score=502, Expect=4e-157]; ENSG00000136531, SCN2A, sodium voltage-gated channel alpha subunit 2, [Score=498, Expect=2e-156]; ENSG00000169432, SCN9A, sodium voltage-gated channel alpha subunit 9, [Score=490, Expect=7e-153]; ENSG00000153253, SCN3A, sodium voltage-gated channel alpha subunit 3, [Score=486, Expect=2e-151]; ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [Score=486, Expect=9e-152]; ENSG00000196876, SCN8A, sodium voltage-gated channel alpha subunit 8, [Score=481, Expect=1e-149]; ENSG00000007314, SCN4A, sodium voltage-gated channel alpha subunit 4, [Score=481, Expect=4e-150]} {Mouse: ENSMUSG00000064329, Scn1a, sodium channel, voltage-gated, type I, alpha, [Score=500, Expect=7e-157]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [Score=494, Expect=3e-155]; ENSMUSG00000075318, Scn2a, sodium channel, voltage-gated, type II, alpha, [Score=490, Expect=4e-153]; ENSMUSG00000057182, Scn3a, sodium channel, voltage-gated, type III, alpha, [Score=484, Expect=2e-151]; ENSMUSG00000075316, Scn9a, sodium channel, voltage-gated, type IX, alpha, [Score=484, Expect=4e-151]; ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [Score=483, Expect=1e-150]; ENSMUSG00000023033, Scn8a, sodium channel, voltage-gated, type VIII, alpha, [Score=481, Expect=5e-150]; ENSMUSG00000034533, Scn10a, sodium channel, voltage-gated, type X, alpha, [Score=475, Expect=6e-148]} {Dmel: FBgn0285944, para, paralytic, [Score=538, Expect=2e-170]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=189, Expect=6e-50]} {Smed: dd_Smed_v6_13973_0_1, dd_Smed_v6_13973_0_1, [Score=610, Expect=0.0]} {RNA1509_56147} {RNA1310_51142}

Mlig455_000489 {REF} {Length: 2384} {Pfam: Ion transport protein [PF00520.33, score=296.0]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=31.7]; Polycystin cation channel [PF08016.14, score=23.0]} {Human: ENSG00000144285, SCN1A, sodium voltage-gated channel alpha subunit 1, [Score=504, Expect=4e-157]; ENSG00000136531, SCN2A, sodium voltage-gated channel alpha subunit 2, [Score=501, Expect=2e-156]; ENSG00000169432, SCN9A, sodium voltage-gated channel alpha subunit 9, [Score=492, Expect=9e-153]; ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [Score=489, Expect=1e-151]; ENSG00000153253, SCN3A, sodium voltage-gated channel alpha subunit 3, [Score=488, Expect=2e-151]; ENSG00000196876, SCN8A, sodium voltage-gated channel alpha subunit 8, [Score=483, Expect=9e-150]; ENSG00000007314, SCN4A, sodium voltage-gated channel alpha subunit 4, [Score=482, Expect=8e-150]; ENSG00000185313, SCN10A, sodium voltage-gated channel alpha subunit 10, [Score=479, Expect=4e-148]} {Mouse: ENSMUSG00000064329, Scn1a, sodium channel, voltage-gated, type I, alpha, [Score=502, Expect=1e-156]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [Score=496, Expect=3e-155]; ENSMUSG00000075318, Scn2a, sodium channel, voltage-gated, type II, alpha, [Score=493, Expect=2e-153]; ENSMUSG00000075316, Scn9a, sodium channel, voltage-gated, type IX, alpha, [Score=487, Expect=4e-151]; ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [Score=486, Expect=1e-150]; ENSMUSG00000057182, Scn3a, sodium channel, voltage-gated, type III, alpha, [Score=486, Expect=4e-151]; ENSMUSG00000023033, Scn8a, sodium channel, voltage-gated, type VIII, alpha, [Score=483, Expect=6e-150]; ENSMUSG00000034533, Scn10a, sodium channel, voltage-gated, type X, alpha, [Score=478, Expect=7e-148]} {Dmel: FBgn0285944, para, paralytic, [Score=541, Expect=1e-170]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=191, Expect=5e-50]} {Smed: dd_Smed_v6_14386_0_1, dd_Smed_v6_14386_0_1, [Score=627, Expect=0.0]} {RNA1509_56147} {RNA1310_51142}

Mlig455_000526 {REF} {Length: 2384} {Pfam: Ion transport protein [PF00520.33, score=296.7]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=31.7]; Polycystin cation channel [PF08016.14, score=22.9]} {Human: ENSG00000144285, SCN1A, sodium voltage-gated channel alpha subunit 1, [Score=503, Expect=3e-157]; ENSG00000136531, SCN2A, sodium voltage-gated channel alpha subunit 2, [Score=501, Expect=2e-156]; ENSG00000169432, SCN9A, sodium voltage-gated channel alpha subunit 9, [Score=492, Expect=8e-153]; ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [Score=489, Expect=8e-152]; ENSG00000153253, SCN3A, sodium voltage-gated channel alpha subunit 3, [Score=488, Expect=2e-151]; ENSG00000196876, SCN8A, sodium voltage-gated channel alpha subunit 8, [Score=484, Expect=1e-149]; ENSG00000007314, SCN4A, sodium voltage-gated channel alpha subunit 4, [Score=483, Expect=6e-150]; ENSG00000185313, SCN10A, sodium voltage-gated channel alpha subunit 10, [Score=478, Expect=5e-148]} {Mouse: ENSMUSG00000064329, Scn1a, sodium channel, voltage-gated, type I, alpha, [Score=502, Expect=1e-156]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [Score=496, Expect=3e-155]; ENSMUSG00000075318, Scn2a, sodium channel, voltage-gated, type II, alpha, [Score=493, Expect=3e-153]; ENSMUSG00000075316, Scn9a, sodium channel, voltage-gated, type IX, alpha, [Score=487, Expect=4e-151]; ENSMUSG00000057182, Scn3a, sodium channel, voltage-gated, type III, alpha, [Score=486, Expect=4e-151]; ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [Score=486, Expect=2e-150]; ENSMUSG00000023033, Scn8a, sodium channel, voltage-gated, type VIII, alpha, [Score=484, Expect=5e-150]; ENSMUSG00000034533, Scn10a, sodium channel, voltage-gated, type X, alpha, [Score=478, Expect=7e-148]} {Dmel: FBgn0285944, para, paralytic, [Score=541, Expect=1e-170]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=191, Expect=6e-50]} {Smed: dd_Smed_v6_14386_0_1, dd_Smed_v6_14386_0_1, [Score=628, Expect=0.0]} {RNA1509_56147} {RNA1310_51142}

Mlig455_024858 {REF} {Length: 1954} {Pfam: Ion transport protein [PF00520.33, score=318.3]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=32.1]; Polycystin cation channel [PF08016.14, score=30.0]} {Human: ENSG00000144285, SCN1A, sodium voltage-gated channel alpha subunit 1, [Score=660, Expect=0.0]; ENSG00000136531, SCN2A, sodium voltage-gated channel alpha subunit 2, [Score=654, Expect=0.0]; ENSG00000169432, SCN9A, sodium voltage-gated channel alpha subunit 9, [Score=649, Expect=0.0]; ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [Score=640, Expect=0.0]; ENSG00000153253, SCN3A, sodium voltage-gated channel alpha subunit 3, [Score=639, Expect=0.0]; ENSG00000007314, SCN4A, sodium voltage-gated channel alpha subunit 4, [Score=635, Expect=0.0]; ENSG00000196876, SCN8A, sodium voltage-gated channel alpha subunit 8, [Score=631, Expect=0.0]; ENSG00000185313, SCN10A, sodium voltage-gated channel alpha subunit 10, [Score=627, Expect=0.0]} {Mouse: ENSMUSG00000064329, Scn1a, sodium channel, voltage-gated, type I, alpha, [Score=655, Expect=0.0]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [Score=652, Expect=0.0]; ENSMUSG00000075318, Scn2a, sodium channel, voltage-gated, type II, alpha, [Score=646, Expect=0.0]; ENSMUSG00000075316, Scn9a, sodium channel, voltage-gated, type IX, alpha, [Score=645, Expect=0.0]; ENSMUSG00000057182, Scn3a, sodium channel, voltage-gated, type III, alpha, [Score=637, Expect=0.0]; ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [Score=635, Expect=0.0]; ENSMUSG00000023033, Scn8a, sodium channel, voltage-gated, type VIII, alpha, [Score=630, Expect=0.0]; ENSMUSG00000034533, Scn10a, sodium channel, voltage-gated, type X, alpha, [Score=623, Expect=0.0]} {Dmel: FBgn0285944, para, paralytic, [Score=701, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=268, Expect=3e-77]} {Smed: dd_Smed_v6_14386_0_1, dd_Smed_v6_14386_0_1, [Score=816, Expect=0.0]} {RNA1310_51142}
33. MligTC455_29132 93 1.93 Mlig455_065718

Neo: -

Age: Up-Down-Up

 0.952 - - - 0.952 - - Mlig455_065718 {REF} {Length: 4874} {Pfam: Fibronectin type III domain [PF00041.23, score=32.7]; 50S ribosome-binding GTPase [PF01926.25, score=24.0]; AIG1 family [PF04548.18, score=23.7]; AAA ATPase domain [PF13191.8, score=23.7]; Septin [PF00735.20, score=19.8]; RsgA GTPase [PF03193.18, score=19.8]} {RNA1509_41954} {RNA1310_1363.1, RNA1509_41954} {RNA1509_41954, RNA815_1248}
34. MligTC455_54845 7 0.16 Mlig455_011372

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_011372 {REF} {Length: 312} {NoTransDecoderORF}
35. MligTC455_01648 4 0.08 Mlig455_065106

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_065106 {REF} {Length: 495} {NoTransDecoderORF} {RNA1310_110067} {RNA815_57749}
36. MligTC455_51603 39 0.81 Mlig455_016769

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_016769 {REF} {Length: 1577} {RNA1509_44500} {RNA1310_22352} {RNA815_21481}
37. MligTC455_32361 166 3.47 Mlig455_009263

Neo: -

Age: Down-Down-Up

 0.95 - - - - 0.950 - Mlig455_009263 {REF} {Length: 2676} {RNA1509_34999, RNA1509_58423} {RNA1310_38117, RNA1509_58423} {RNA1509_58423, RNA815_6529.1}
38. MligTC455_42902 28 0.59 Mlig455_017220

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_017220 {REF} {Length: 656} {NoTransDecoderORF} {RNA1509_43125} {RNA1310_24647} {RNA815_24974}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA