Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_38035 | 32 | 0.67 | Mlig455_065920 | Neo: - Age: - |
Mlig455_065920 {REF} {Length: 2824} {RNA1509_13615} {RNA1310_23112.1} {RNA815_9470} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -0.641 | 1.223 | 1.00000 | 1.00000 | |
RegionR2 | -0.9 | 1.223 | 0.92998 | 1.00000 | |
RegionR3 | -0.339 | 1.223 | 0.85580 | 1.00000 | |
RegionR4 | 2.915 | 1.223 | 0.04843 | 0.18879 | |
RegionR5 | 1.518 | 1.223 | 0.19197 | 0.47652 | |
RegionR6 | 0.077 | 1.223 | 0.76218 | 1.00000 | |
RegionR7 | 0.732 | 1.223 | 0.60637 | 1.00000 | |
RegionR8 | -3.362 | 1.223 | 0.99963 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -2.305 | 1.223 | 0.99983 | 1.00000 | |
RegenerationR2 | -0.524 | 1.223 | 0.61361 | 0.92067 | |
RegenerationR3 | -1.139 | 1.223 | 0.34491 | 0.76830 | |
RegenerationR4 | -2.891 | 1.223 | 0.00940 | 0.14657 | |
RegenerationR5 | -1.05 | 1.223 | 0.20113 | 0.63368 | |
RegenerationR6 | -0.439 | 1.223 | 0.68454 | 0.91664 | |
RegenerationBL | -3.023 | 1.223 | 1.00000 | 1.00000 | |
RegenerationTP | 1.631 | 1.223 | 0.48112 | 0.88886 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_38035 | 32 | 0.67 | Mlig455_065920 | Neo: - Age: - |
4 | - | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_065920 {REF} {Length: 2824} {RNA1509_13615} {RNA1310_23112.1} {RNA815_9470} | |
2. | MligTC455_17587 | 280 | 5.82 | Mlig455_029756, Mlig455_029760 | Neo: - Age: - Region-enriched R5: 2.731/0.00213 |
1.741 | - | - | 0.964 | - | 0.777 | - | Mlig455_029756 {REF} {Length: 2115} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4507) [PF14964.8, score=62.5]} {RNA1509_32194} {RNA1310_21499} {RNA815_26761} Mlig455_029760 {REF} {Length: 2118} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4507) [PF14964.8, score=62.6]} {RNA1509_32194} {RNA1310_21499, RNA1509_32194} {RNA1509_32194, RNA815_26761} |
|
3. | MligTC455_15471 | 310 | 6.45 | Mlig455_022527 | Neo: Irradiation Age: logFC(26M/2M)=0.502 Region-enriched R5: 3.024/0.00001 |
CHEK1 | 1.701 | - | - | 0.950 | - | 0.751 | - | Mlig455_022527 {REF} {Length: 2924} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=161.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.6]; Kinase-like [PF14531.8, score=18.3]} {Human: ENSG00000149554, CHEK1, checkpoint kinase 1, [RH, Score=219, Expect=3e-64]} {Mouse: ENSMUSG00000032113, Chek1, checkpoint kinase 1, [RH, Score=207, Expect=4e-60]} {Dmel: FBgn0261278, grp, grapes, [RH, Score=213, Expect=7e-62]} {Celegans: WBGene00000498, chk-1, Serine/threonine-protein kinase chk-1, [RH, Score=208, Expect=3e-60]} {Smed: dd_Smed_v6_12789_0_1, dd_Smed_v6_12789_0_1, [Score=124, Expect=3e-30]} {RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1310_7988, RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1509_12170, RNA1509_35656, RNA1509_43198, RNA815_13053} |
4. | MligTC455_32817 | 165 | 3.43 | Mlig455_052388 | Neo: Irradiation Age: - Region-enriched R5: 3.610/0.00001 |
1.666 | - | - | 0.954 | - | 0.712 | - | Mlig455_052388 {REF} {Length: 2689} {TRANSSPLICED} {RNA1509_52938, RNA1509_53489} {RNA1310_20447.2, RNA1509_52938, RNA1509_53489} {RNA1509_52938, RNA1509_53489, RNA815_26992} | |
5. | MligTC455_14872 | 28 | 0.58 | Mlig455_064004, Mlig455_064044 | Neo: - Age: logFC(26M/2M)=1.526 |
CLCA1 | 0.992 | - | - | 0.992 | - | - | - | Mlig455_064004 {REF} {Length: 4380} {Pfam: von Willebrand factor type A domain [PF00092.30, score=55.0]; von Willebrand factor type A domain [PF13768.8, score=48.2]; von Willebrand factor type A domain [PF13519.8, score=47.8]; vWA found in TerF C terminus [PF10138.11, score=29.1]; VWA domain containing CoxE-like protein [PF05762.16, score=28.0]; Calcium-activated chloride channel N terminal [PF08434.13, score=19.9]} {Human: ENSG00000016490, CLCA1, chloride channel accessory 1, [Score=150, Expect=1e-36]} {Mouse: ENSMUSG00000028255, Clca1, chloride channel accessory 1, [Score=154, Expect=6e-38]} {Smed: dd_Smed_v6_968_0_1, dd_Smed_v6_968_0_1, [Score=89.0, Expect=6e-18]} {RNA1509_43698} {RNA1310_4397} {RNA815_4081} Mlig455_064044 {REF} {Length: 4389} {Pfam: von Willebrand factor type A domain [PF00092.30, score=57.6]; von Willebrand factor type A domain [PF13768.8, score=50.7]; von Willebrand factor type A domain [PF13519.8, score=47.7]; vWA found in TerF C terminus [PF10138.11, score=29.0]; VWA domain containing CoxE-like protein [PF05762.16, score=26.0]; Calcium-activated chloride channel N terminal [PF08434.13, score=24.0]} {Human: ENSG00000016490, CLCA1, chloride channel accessory 1, [Score=157, Expect=9e-39]} {Mouse: ENSMUSG00000028255, Clca1, chloride channel accessory 1, [Score=159, Expect=2e-39]} {Smed: dd_Smed_v6_968_0_1, dd_Smed_v6_968_0_1, [Score=91.3, Expect=1e-18]} {RNA1509_43698} {RNA1310_4397, RNA1509_43698} {RNA1509_43698, RNA815_4081} |
6. | MligTC455_37104 | 146 | 3.05 | Mlig455_026653, Mlig455_039048, Mlig455_052213 | Neo: - Age: - |
0.992 | - | - | 0.992 | - | - | - | Mlig455_026653 {REF} {Length: 2643} {Pfam: Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase [PF18371.3, score=23.2]} {RNA1509_49031} {RNA1310_34323} {RNA815_33771.1} Mlig455_039048 {REF} {Length: 1239} {Pfam: Chordin-like protein 1/2 C-terminal [PF19548.1, score=23.1]} {RNA1509_49031} {RNA1310_23076.1} {RNA815_54937} Mlig455_052213 {REF} {Length: 593} {RNA1509_49031} {RNA1310_97783} {RNA815_54937} |
|
7. | MligTC455_33740 | 48 | 1 | Mlig455_044475 | Neo: - Age: - |
0.986 | - | - | - | - | 0.986 | - | Mlig455_044475 {REF} {Length: 1497} {RNA1509_52185} {RNA1310_8105} {RNA815_41122} | |
8. | MligTC455_23871 | 181 | 3.77 | Mlig455_043096 | Neo: - Age: - |
SLC35A1 | 0.983 | - | - | 0.983 | - | - | - | Mlig455_043096 {REF} {Length: 4193} {TRANSSPLICED} {Pfam: Nucleotide-sugar transporter [PF04142.17, score=161.5]} {Human: ENSG00000164414, SLC35A1, solute carrier family 35 member A1, [Score=145, Expect=6e-40]} {Mouse: ENSMUSG00000033272, Slc35a4, solute carrier family 35, member A4, [RH, Score=142, Expect=4e-39]} {Dmel: FBgn0024994, Csat, [Score=114, Expect=1e-28]} {Celegans: WBGene00022721, ugtp-1, UDP-galactose translocator 1, [Score=112, Expect=4e-28]} {Smed: dd_Smed_v6_4838_0_1, dd_Smed_v6_4838_0_1, [RH, Score=344, Expect=4e-118]} {RNA1509_30399, RNA1509_43858} {RNA1310_17770.2, RNA1509_30399, RNA1509_43858} {RNA1509_30399, RNA1509_43858, RNA815_11442} |
9. | MligTC455_07395 | 44 | 0.92 | Mlig455_059338 | Neo: - Age: - |
0.979 | - | - | 0.979 | - | - | - | Mlig455_059338 {REF} {Length: 8046} {Pfam: HEAT repeats [PF13646.8, score=28.2]} | |
10. | MligTC455_42665 | 67 | 1.39 | Mlig455_043259 | Neo: - Age: - |
0.974 | - | - | 0.974 | - | - | - | Mlig455_043259 {REF} {Length: 3666} {TRANSSPLICED} {RNA1509_19907} {RNA1310_11028} {RNA815_16751} | |
11. | MligTC455_30934 | 89 | 1.86 | Mlig455_044573 | Neo: - |
BCHE | 0.97 | - | - | 0.970 | - | - | - | Mlig455_044573 {REF} {Length: 2858} {Pfam: Carboxylesterase family [PF00135.30, score=252.0]} {Human: ENSG00000114200, BCHE, butyrylcholinesterase, [Score=155, Expect=1e-40]; ENSG00000087085, ACHE, acetylcholinesterase (Cartwright blood group), [Score=155, Expect=7e-41]} {Mouse: ENSMUSG00000023328, Ache, acetylcholinesterase, [Score=156, Expect=3e-41]} {Dmel: FBgn0083975, Nlg4, Neuroligin 4, [Score=123, Expect=2e-29]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [Score=123, Expect=9e-30]} {Smed: dd_Smed_v6_4800_0_2, dd_Smed_v6_4800_0_2, [Score=118, Expect=5e-28]} {RNA1509_58431} {RNA1310_12691} {RNA815_28725} |
12. | MligTC455_52901 | 251 | 5.22 | Mlig455_056642 | Neo: - Age: - Region-enriched R5: 7.903/0.00238 |
0.97 | - | - | 0.970 | - | - | - | Mlig455_056642 {REF} {Length: 312} {NoTransDecoderORF} {RNA1509_12125, RNA1509_1356, RNA1509_20024} {RNA1310_122974, RNA1509_12125, RNA1509_1356, RNA1509_20024} {RNA1509_12125, RNA1509_1356, RNA1509_20024, RNA815_80.2} | |
13. | MligTC455_15964 | 150 | 3.13 | Mlig455_041648 | Neo: - Age: - |
SMAD4 | 0.968 | - | - | 0.968 | - | - | - | Mlig455_041648 {REF} {Length: 2630} {TRANSSPLICED} {Pfam: MH2 domain [PF03166.16, score=213.5]; MH1 domain [PF03165.18, score=129.8]} {Human: ENSG00000141646, SMAD4, SMAD family member 4, [Score=447, Expect=1e-153]} {Mouse: ENSMUSG00000024515, Smad4, SMAD family member 4, [Score=442, Expect=6e-151]} {Dmel: FBgn0011655, Med, Medea, [Score=278, Expect=1e-85]} {Celegans: WBGene00004858, sma-4, Dwarfin sma-4, [Score=288, Expect=5e-91]} {Smed: dd_Smed_v6_1923_0_1, dd_Smed_v6_1923_0_1, [Score=282, Expect=4e-88]} {RNA1509_20434, RNA1509_52834, RNA1509_58190} {RNA1310_15699.1, RNA1509_20434, RNA1509_52834, RNA1509_58190} {RNA1509_20434, RNA1509_52834, RNA1509_58190, RNA815_20871} |
14. | MligTC455_42880 | 163 | 3.39 | Mlig455_041430, Mlig455_061380, Mlig455_061403 | Neo: Int S/G2/M Age: - |
0.968 | - | - | 0.968 | - | - | - | Mlig455_041430 {REF} {Length: 2895} {RNA1509_53497} {RNA1310_24733.1} {RNA815_19598.2} Mlig455_061380 {REF} {Length: 2573} {TRANSSPLICED} {RNA1509_53497} {RNA1310_24733.1} {RNA815_19598.2} Mlig455_061403 {REF} {Length: 2495} {RNA1509_53497} {RNA1310_24733.1, RNA1509_53497} {RNA1509_53497, RNA815_19598.2} |
|
15. | MligTC455_51147 | 152 | 3.18 | Mlig455_022942 | Neo: Irradiation Age: - |
KMT5B | 0.963 | - | - | 0.963 | - | - | - | Mlig455_022942 {REF} {Length: 2276} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=28.4]} {Human: ENSG00000110066, KMT5B, lysine methyltransferase 5B, [RH, Score=218, Expect=1e-66]} {Mouse: ENSMUSG00000045098, Kmt5b, lysine methyltransferase 5B, [RH, Score=218, Expect=8e-63]} {Dmel: FBgn0025639, Hmt4-20, Histone methyltransferase 4-20, [Score=208, Expect=5e-59]} {Celegans: WBGene00016313, set-4, Histone-lysine N-methyltransferase Suv4-20, [RH, Score=175, Expect=8e-52]} {Smed: dd_Smed_v6_11927_0_1, dd_Smed_v6_11927_0_1, [RH, Score=235, Expect=1e-70]} {RNA1509_37139, RNA1509_53387} {RNA1310_10417, RNA1509_37139, RNA1509_53387} {RNA1509_37139, RNA1509_53387, RNA815_7090} |
16. | MligTC455_03899 | 12 | 0.26 | Mlig455_050776 | Neo: - Age: Down-Down-Up |
0.958 | - | - | - | - | 0.958 | - | Mlig455_050776 {REF} {Length: 3955} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=50.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=32.5]; Integrase zinc binding domain [PF17921.3, score=32.1]; Integrase core domain [PF00665.28, score=25.4]} {Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=75.9, Expect=2e-16]} {RNA1509_6047} {RNA1310_10915} {RNA815_31437} | |
17. | MligTC455_36948 | 315 | 6.56 | Mlig455_059931 | Neo: - Age: Up-Down-Down |
SLC49A3 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_059931 {REF} {Length: 2637} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=73.7]} {Human: ENSG00000169026, SLC49A3, solute carrier family 49 member 3, [RH, Score=263, Expect=5e-81]} {Mouse: ENSMUSG00000029490, Mfsd7a, major facilitator superfamily domain containing 7A, [RH, Score=249, Expect=3e-76]} {Dmel: FBgn0033196, CG1358, [Score=145, Expect=4e-38]} {Celegans: WBGene00015181, B0416.5, [RH, Score=234, Expect=6e-71]} {Smed: dd_Smed_v6_5238_0_1, dd_Smed_v6_5238_0_1, [RH, Score=283, Expect=2e-90]} {RNA1509_27866} {RNA1310_16250.1} {RNA815_4804} |
18. | MligTC455_32695 | 269 | 5.61 | Mlig455_031878 | Neo: - Age: - Region-enriched R5: 2.191/0.02917 |
0.957 | - | - | 0.957 | - | - | - | Mlig455_031878 {REF} {Length: 1821} {TRANSSPLICED} {Pfam: Ribosome recycling factor [PF01765.21, score=70.6]} {Mouse: ENSMUSG00000026887, Mrrf, mitochondrial ribosome recycling factor, [RH, Score=57.4, Expect=2e-09]} {Dmel: FBgn0035980, mRRF1, mitochondrial ribosome recycling factor 1, [RH, Score=77.0, Expect=2e-16]} {RNA1509_38843} {RNA1310_31804} {RNA815_29259} | |
19. | MligTC455_46808 | 744 | 15.5 | Mlig455_002870 | Neo: - Age: - |
DPM3 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_002870 {REF} {Length: 1497} {TRANSSPLICED} {Pfam: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) [PF08285.13, score=89.8]} {Human: ENSG00000179085, DPM3, dolichyl-phosphate mannosyltransferase subunit 3, [RH, Score=63.2, Expect=7e-14]} {Mouse: ENSMUSG00000042737, Dpm3, dolichyl-phosphate mannosyltransferase polypeptide 3, [RH, Score=60.8, Expect=3e-13]} {Dmel: FBgn0053977, CG33977, [RH, Score=64.7, Expect=7e-15]} {Smed: dd_Smed_v6_2396_0_1, dd_Smed_v6_2396_0_1, [RH, Score=79.0, Expect=1e-20]} {RNA1509_26430, RNA1509_30752, RNA1509_51954, RNA1509_9616} {RNA1310_46442.1, RNA1509_26430, RNA1509_30752, RNA1509_51954, RNA1509_9616} {RNA1509_26430, RNA1509_30752, RNA1509_51954, RNA1509_9616, RNA815_7334.1} |
20. | MligTC455_20023 | 107 | 2.22 | Mlig455_022470, Mlig455_069866 | Neo: - Age: - |
NSD2 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_022470 {REF} {Length: 545} {Pfam: PHD-finger [PF00628.31, score=22.9]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=19.7]} {RNA1310_48149} {RNA815_58756} Mlig455_069866 {REF} {Length: 452} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=106.0]; PHD-finger [PF00628.31, score=32.7]; AWS domain [PF17907.3, score=22.2]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=18.4]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [Score=209, Expect=2e-54]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [Score=209, Expect=8e-55]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [Score=200, Expect=1e-51]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [Score=172, Expect=2e-43]} {Smed: dd_Smed_v6_4755_0_2, dd_Smed_v6_4755_0_2, [Score=186, Expect=6e-49]} {RNA1310_48149} {RNA815_58756} |
21. | MligTC455_15651 | 59 | 1.23 | Mlig455_046263 | Neo: - Age: - |
DSTYK | 0.953 | - | - | - | - | - | 0.953 | Mlig455_046263 {REF} {Length: 4007} {Pfam: Protein kinase domain [PF00069.27, score=112.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=106.5]; Fungal protein kinase [PF17667.3, score=18.4]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=612, Expect=0.0]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=606, Expect=0.0]} {Dmel: FBgn0259680, Pkcdelta, Protein kinase C delta, [Score=81.6, Expect=2e-15]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=78.6, Expect=1e-14]} {Smed: dd_Smed_v6_4436_0_1, dd_Smed_v6_4436_0_1, [Score=533, Expect=7e-176]} {RNA1509_51957} {RNA1310_22897} {RNA815_9862} |
22. | MligTC455_49053 | 225 | 4.69 | Mlig455_032606 | Neo: - Age: - |
TRMT10B | 0.953 | - | - | 0.953 | - | - | - | Mlig455_032606 {REF} {Length: 1984} {TRANSSPLICED} {Pfam: tRNA (Guanine-1)-methyltransferase [PF01746.23, score=62.7]} {Human: ENSG00000165275, TRMT10B, tRNA methyltransferase 10B, [RH, Score=103, Expect=1e-25]} {Mouse: ENSMUSG00000035601, Trmt10b, tRNA methyltransferase 10B, [RH, Score=110, Expect=4e-28]} {Dmel: FBgn0031189, CG14618, [Score=82.8, Expect=4e-18]} {Celegans: WBGene00009131, F25H8.1, [Score=80.9, Expect=1e-17]} {Smed: dd_Smed_v6_9031_0_1, dd_Smed_v6_9031_0_1, [Score=92.8, Expect=2e-22]} {RNA1509_40707} {RNA1310_33603.2, RNA1509_40707} {RNA1509_40707, RNA815_17930.1} |