TomoSeq data search

Data search

Results for MligTC455_42665

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42665

67

1.39

Mlig455_043259

Neo: -

Age: -

Mlig455_043259 {REF} {Length: 3666} {TRANSSPLICED} {RNA1509_19907} {RNA1310_11028} {RNA815_16751}

Cumulative graph for MligTC455_42665

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.302	1.593	0.56011	1.00000
RegionR2	-1.616	1.593	0.99782	1.00000
RegionR3	0.026	1.593	0.84995	1.00000
RegionR4	1.995	1.593	0.11013	0.32809
RegionR5	1.055	1.593	0.26004	0.58078
RegionR6	0.321	1.593	0.72973	1.00000
RegionR7	0.627	1.593	0.61775	1.00000
RegionR8	0.893	1.593	0.53373	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.385	1.593	1.00000	1.00000
RegenerationR2	-0.706	1.593	0.45569	0.85027
RegenerationR3	-0.639	1.593	0.45142	0.83276
RegenerationR4	-1.581	1.593	0.09088	0.47098
RegenerationR5	-0.597	1.593	0.40994	0.80547
RegenerationR6	-1.112	1.593	0.24236	0.59019
RegenerationBL	-1.471	1.593	0.29213	0.65428
RegenerationTP	-2.742	1.593	0.05714	0.38875

Genes with expression patterns similar to MligTC455_42665

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42665	67	1.39	Mlig455_043259	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043259 {REF} {Length: 3666} {TRANSSPLICED} {RNA1509_19907} {RNA1310_11028} {RNA815_16751}
2.	MligTC455_30934	89	1.86	Mlig455_044573	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.509	BCHE	0.974	-	-	0.974	-	-	-	Mlig455_044573 {REF} {Length: 2858} {Pfam: Carboxylesterase family [PF00135.30, score=252.0]} {Human: ENSG00000114200, BCHE, butyrylcholinesterase, [Score=155, Expect=1e-40]; ENSG00000087085, ACHE, acetylcholinesterase (Cartwright blood group), [Score=155, Expect=7e-41]} {Mouse: ENSMUSG00000023328, Ache, acetylcholinesterase, [Score=156, Expect=3e-41]} {Dmel: FBgn0083975, Nlg4, Neuroligin 4, [Score=123, Expect=2e-29]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [Score=123, Expect=9e-30]} {Smed: dd_Smed_v6_4800_0_2, dd_Smed_v6_4800_0_2, [Score=118, Expect=5e-28]} {RNA1509_58431} {RNA1310_12691} {RNA815_28725}
3.	MligTC455_38035	32	0.67	Mlig455_065920	Neo: - Age: -		0.974	-	-	0.974	-	-	-	Mlig455_065920 {REF} {Length: 2824} {RNA1509_13615} {RNA1310_23112.1} {RNA815_9470}
4.	MligTC455_37104	146	3.05	Mlig455_026653, Mlig455_039048, Mlig455_052213	Neo: - Age: -		0.973	-	-	0.973	-	-	-	Mlig455_026653 {REF} {Length: 2643} {Pfam: Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase [PF18371.3, score=23.2]} {RNA1509_49031} {RNA1310_34323} {RNA815_33771.1} Mlig455_039048 {REF} {Length: 1239} {Pfam: Chordin-like protein 1/2 C-terminal [PF19548.1, score=23.1]} {RNA1509_49031} {RNA1310_23076.1} {RNA815_54937} Mlig455_052213 {REF} {Length: 593} {RNA1509_49031} {RNA1310_97783} {RNA815_54937}
5.	MligTC455_15964	150	3.13	Mlig455_041648	Neo: - Age: -	SMAD4	0.97	-	-	0.970	-	-	-	Mlig455_041648 {REF} {Length: 2630} {TRANSSPLICED} {Pfam: MH2 domain [PF03166.16, score=213.5]; MH1 domain [PF03165.18, score=129.8]} {Human: ENSG00000141646, SMAD4, SMAD family member 4, [Score=447, Expect=1e-153]} {Mouse: ENSMUSG00000024515, Smad4, SMAD family member 4, [Score=442, Expect=6e-151]} {Dmel: FBgn0011655, Med, Medea, [Score=278, Expect=1e-85]} {Celegans: WBGene00004858, sma-4, Dwarfin sma-4, [Score=288, Expect=5e-91]} {Smed: dd_Smed_v6_1923_0_1, dd_Smed_v6_1923_0_1, [Score=282, Expect=4e-88]} {RNA1509_20434, RNA1509_52834, RNA1509_58190} {RNA1310_15699.1, RNA1509_20434, RNA1509_52834, RNA1509_58190} {RNA1509_20434, RNA1509_52834, RNA1509_58190, RNA815_20871}
6.	MligTC455_23871	181	3.77	Mlig455_043096	Neo: - Age: -	SLC35A1	0.969	-	-	0.969	-	-	-	Mlig455_043096 {REF} {Length: 4193} {TRANSSPLICED} {Pfam: Nucleotide-sugar transporter [PF04142.17, score=161.5]} {Human: ENSG00000164414, SLC35A1, solute carrier family 35 member A1, [Score=145, Expect=6e-40]} {Mouse: ENSMUSG00000033272, Slc35a4, solute carrier family 35, member A4, [RH, Score=142, Expect=4e-39]} {Dmel: FBgn0024994, Csat, [Score=114, Expect=1e-28]} {Celegans: WBGene00022721, ugtp-1, UDP-galactose translocator 1, [Score=112, Expect=4e-28]} {Smed: dd_Smed_v6_4838_0_1, dd_Smed_v6_4838_0_1, [RH, Score=344, Expect=4e-118]} {RNA1509_30399, RNA1509_43858} {RNA1310_17770.2, RNA1509_30399, RNA1509_43858} {RNA1509_30399, RNA1509_43858, RNA815_11442}
7.	MligTC455_29311	38	0.79	Mlig455_036659	Neo: - Age: - Region-enriched R4: 5.181/0.01948 Region-enriched R5: 4.507/0.01647		0.966	-	-	0.966	-	-	-	Mlig455_036659 {REF} {Length: 559} {TRANSSPLICED} {RNA1310_66594.1} {RNA815_40011}
8.	MligTC455_26021	68	1.41	Mlig455_026969, Mlig455_030729	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.388		0.963	-	-	-	-	-	0.963	Mlig455_026969 {REF} {Length: 2311} {TRANSSPLICED} {Pfam: Beta-lactamase superfamily domain [PF12706.9, score=27.5]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [RH, Score=162, Expect=3e-47]} {RNA1509_51505} {RNA1310_13475, RNA1509_51505} {RNA1509_51505, RNA815_8908} Mlig455_030729 {REF} {Length: 2308} {TRANSSPLICED} {Pfam: Beta-lactamase superfamily domain [PF12706.9, score=27.5]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [RH, Score=162, Expect=3e-47]} {RNA1509_18012} {RNA1310_13475, RNA1509_18012} {RNA1509_18012, RNA815_8908}
9.	MligTC455_49086	274	5.71	Mlig455_011515	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.627 Region-enriched R3: 2.565/0.00416 Region-enriched R5: 2.441/0.00091 Region-enriched R6: 2.339/0.03988	RAC1	0.962	-	-	0.962	-	-	-	Mlig455_011515 {REF} {Length: 1740} {Pfam: Ras family [PF00071.24, score=159.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=69.7]; ADP-ribosylation factor family [PF00025.23, score=26.0]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=221, Expect=2e-73]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=218, Expect=1e-72]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=217, Expect=4e-72]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=221, Expect=1e-73]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=217, Expect=3e-72]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=217, Expect=3e-72]} {Dmel: FBgn0010333, Rac1, [Score=221, Expect=3e-74]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=226, Expect=5e-76]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=223, Expect=6e-75]} {RNA1509_17203} {RNA1310_15755.1} {RNA815_8276}
10.	MligTC455_14872	28	0.58	Mlig455_064004, Mlig455_064044	Neo: - Age: logFC(26M/2M)=1.526	CLCA1	0.96	-	-	0.960	-	-	-	Mlig455_064004 {REF} {Length: 4380} {Pfam: von Willebrand factor type A domain [PF00092.30, score=55.0]; von Willebrand factor type A domain [PF13768.8, score=48.2]; von Willebrand factor type A domain [PF13519.8, score=47.8]; vWA found in TerF C terminus [PF10138.11, score=29.1]; VWA domain containing CoxE-like protein [PF05762.16, score=28.0]; Calcium-activated chloride channel N terminal [PF08434.13, score=19.9]} {Human: ENSG00000016490, CLCA1, chloride channel accessory 1, [Score=150, Expect=1e-36]} {Mouse: ENSMUSG00000028255, Clca1, chloride channel accessory 1, [Score=154, Expect=6e-38]} {Smed: dd_Smed_v6_968_0_1, dd_Smed_v6_968_0_1, [Score=89.0, Expect=6e-18]} {RNA1509_43698} {RNA1310_4397} {RNA815_4081} Mlig455_064044 {REF} {Length: 4389} {Pfam: von Willebrand factor type A domain [PF00092.30, score=57.6]; von Willebrand factor type A domain [PF13768.8, score=50.7]; von Willebrand factor type A domain [PF13519.8, score=47.7]; vWA found in TerF C terminus [PF10138.11, score=29.0]; VWA domain containing CoxE-like protein [PF05762.16, score=26.0]; Calcium-activated chloride channel N terminal [PF08434.13, score=24.0]} {Human: ENSG00000016490, CLCA1, chloride channel accessory 1, [Score=157, Expect=9e-39]} {Mouse: ENSMUSG00000028255, Clca1, chloride channel accessory 1, [Score=159, Expect=2e-39]} {Smed: dd_Smed_v6_968_0_1, dd_Smed_v6_968_0_1, [Score=91.3, Expect=1e-18]} {RNA1509_43698} {RNA1310_4397, RNA1509_43698} {RNA1509_43698, RNA815_4081}
11.	MligTC455_49087	353	7.35	Mlig455_049999	Neo: - Age: logFC(26M/2M)=0.321 Region-enriched R3: 2.015/0.00143 Region-enriched R5: 1.536/0.00732	RAC1	0.96	-	-	0.960	-	-	-	Mlig455_049999 {REF} {Length: 1762} {Pfam: Ras family [PF00071.24, score=153.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=64.3]; ADP-ribosylation factor family [PF00025.23, score=21.0]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=218, Expect=3e-72]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=215, Expect=2e-71]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=213, Expect=2e-70]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=218, Expect=2e-72]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=214, Expect=5e-71]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=213, Expect=1e-70]} {Dmel: FBgn0010333, Rac1, [Score=218, Expect=6e-73]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=223, Expect=6e-75]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=219, Expect=2e-73]} {RNA1509_17203} {RNA1310_15755.1} {RNA815_8276}
12.	MligTC455_35600	12	0.26	Mlig455_011803	Neo: - Age: - Region-enriched R2: 8.821/0.00138 Regeneration-downregulated R2: -5.947 Regeneration-depleted R2: -5.947		0.959	-	-	-	-	0.959	-	Mlig455_011803 {REF} {Length: 967} {Pfam: Lectin C-type domain [PF00059.23, score=23.3]} {RNA1509_20946} {RNA1310_48952} {RNA815_4785.1}
13.	MligTC455_11886	197	4.1	Mlig455_060688	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.387		0.958	-	-	0.958	-	-	-	Mlig455_060688 {REF} {Length: 2150} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF07647.19, score=44.3]; SAM domain (Sterile alpha motif) [PF00536.32, score=36.5]} {Dmel: FBgn0050476, ave, aveugle, [RH, Score=45.4, Expect=1e-06]} {RNA1509_24373, RNA1509_52265} {RNA1310_35457.1, RNA1509_24373, RNA1509_52265} {RNA1509_24373, RNA1509_52265, RNA815_21293}
14.	MligTC455_37612	366	7.62	Mlig455_026659	Neo: Int S/G2/M Age: - Region-enriched R5: 3.326/0.00001		0.957	-	-	0.957	-	-	-	Mlig455_026659 {REF} {Length: 1882} {TRANSSPLICED} {RNA1509_32576, RNA1509_34929} {RNA1310_30559.1, RNA1509_32576, RNA1509_34929} {RNA1509_32576, RNA1509_34929, RNA815_13235.1}
15.	MligTC455_07395	44	0.92	Mlig455_059338	Neo: - Age: -		0.952	-	-	0.952	-	-	-	Mlig455_059338 {REF} {Length: 8046} {Pfam: HEAT repeats [PF13646.8, score=28.2]}

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