Data search


search
Exact
Search

Results for MligTC455_38040

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38040 187 3.90 Mlig455_050349

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.323

Region-enriched R2: 2.513/0.04185

PITPNM1 Mlig455_050349 {REF} {Length: 5662} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=356.4]; DDHD domain [PF02862.19, score=125.7]} {Human: ENSG00000110697, PITPNM1, phosphatidylinositol transfer protein membrane associated 1, [Score=913, Expect=0.0]} {Mouse: ENSMUSG00000097096, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [RH, Score=918, Expect=0.0]; ENSMUSG00000024851, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [RH, Score=918, Expect=0.0]} {Dmel: FBgn0003218, rdgB, retinal degeneration B, [Score=593, Expect=0.0]} {Celegans: WBGene00010813, pitp-1, PhosphatidylInositol Transfer Protein family, [RH, Score=372, Expect=2e-109]} {Smed: dd_Smed_v6_7211_0_2, dd_Smed_v6_7211_0_2, [RH, Score=930, Expect=0.0]} {RNA1509_13228} {RNA1310_1072} {RNA815_6615}

Cumulative graph for MligTC455_38040

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.894 2.496 0.06605 0.58081
RegionR2 2.513 2.496 0.00259 0.04185
RegionR3 0.678 2.496 0.24938 0.79315
RegionR4 -2.557 2.496 0.00158 0.01489
RegionR5 -0.205 2.496 0.71139 1.00000
RegionR6 1.308 2.496 0.02770 0.30611
RegionR7 0.126 2.496 0.87640 1.00000
RegionR8 1.031 2.496 0.26408 0.88672

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.485 2.496 0.78149 1.00000
RegenerationR2 -0.122 2.496 0.89403 1.00000
RegenerationR3 0.134 2.496 0.87358 1.00000
RegenerationR4 1.157 2.496 0.19493 0.64015
RegenerationR5 -0.314 2.496 0.70977 0.95542
RegenerationR6 -0.391 2.496 0.69715 0.92298
RegenerationBL -4.213 2.496 0.08698 0.34582
RegenerationTP -0.04 2.496 0.98607 1.00000


Genes with expression patterns similar to MligTC455_38040

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38040 187 3.9 Mlig455_050349

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.323

Region-enriched R2: 2.513/0.04185

PITPNM1 5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_050349 {REF} {Length: 5662} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=356.4]; DDHD domain [PF02862.19, score=125.7]} {Human: ENSG00000110697, PITPNM1, phosphatidylinositol transfer protein membrane associated 1, [Score=913, Expect=0.0]} {Mouse: ENSMUSG00000097096, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [RH, Score=918, Expect=0.0]; ENSMUSG00000024851, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [RH, Score=918, Expect=0.0]} {Dmel: FBgn0003218, rdgB, retinal degeneration B, [Score=593, Expect=0.0]} {Celegans: WBGene00010813, pitp-1, PhosphatidylInositol Transfer Protein family, [RH, Score=372, Expect=2e-109]} {Smed: dd_Smed_v6_7211_0_2, dd_Smed_v6_7211_0_2, [RH, Score=930, Expect=0.0]} {RNA1509_13228} {RNA1310_1072} {RNA815_6615}
2. MligTC455_38133 211 4.4 Mlig455_067218

Neo: -

Age: -

Region-enriched R2: 2.653/0.00351

0.962 - - - - - 0.962 Mlig455_067218 {REF} {Length: 608} {NoTransDecoderORF} {RNA1509_20684} {RNA1310_109438} {RNA815_57053}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA