Data search


search
Exact
Search

Results for MligTC455_38133

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38133 211 4.40 Mlig455_067218

Neo: -

Age: -

Region-enriched R2: 2.653/0.00351

Mlig455_067218 {REF} {Length: 608} {NoTransDecoderORF} {RNA1509_20684} {RNA1310_109438} {RNA815_57053}

Cumulative graph for MligTC455_38133

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.082 2.841 0.11694 0.70519
RegionR2 2.653 2.841 0.00008 0.00351
RegionR3 0.593 2.841 0.16859 0.69213
RegionR4 -0.667 2.841 0.28816 0.59814
RegionR5 -1.26 2.841 0.00500 0.03463
RegionR6 -0.328 2.841 0.50598 1.00000
RegionR7 -0.585 2.841 0.51116 1.00000
RegionR8 1.675 2.841 0.03450 0.36453

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.674 2.841 0.76312 1.00000
RegenerationR2 -1.144 2.841 0.08771 0.47518
RegenerationR3 -0.091 2.841 0.90584 1.00000
RegenerationR4 -0.971 2.841 0.16273 0.59639
RegenerationR5 0.111 2.841 0.84235 1.00000
RegenerationR6 -3.445 2.841 0.01420 0.14669
RegenerationBL 0.503 2.841 0.66555 0.99927
RegenerationTP -1.354 2.841 0.31115 0.75566


Genes with expression patterns similar to MligTC455_38133

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38133 211 4.4 Mlig455_067218

Neo: -

Age: -

Region-enriched R2: 2.653/0.00351

5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_067218 {REF} {Length: 608} {NoTransDecoderORF} {RNA1509_20684} {RNA1310_109438} {RNA815_57053}
2. MligTC455_38132 203 4.23 Mlig455_029962

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.275

Region-enriched R2: 2.627/0.00986

PSMD10 4.75 0.999 0.995 0.998 - 0.784 0.974 Mlig455_029962 {REF} {Length: 3088} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=103.3]; Ankyrin repeats (many copies) [PF13637.8, score=83.4]; Ankyrin repeat [PF13606.8, score=68.9]; Ankyrin repeats (many copies) [PF13857.8, score=67.9]; Ankyrin repeat [PF00023.32, score=56.9]} {Human: ENSG00000101843, PSMD10, proteasome 26S subunit, non-ATPase 10, [Score=83.6, Expect=9e-19]; ENSG00000029534, ANK1, ankyrin 1, [Score=81.3, Expect=7e-17]} {Mouse: ENSMUSG00000031429, Psmd10, proteasome (prosome, macropain) 26S subunit, non-ATPase, 10, [Score=81.3, Expect=4e-18]; ENSMUSG00000116430, Psmd10, proteasome (prosome, macropain) 26S subunit, non-ATPase, 10, [Score=81.3, Expect=4e-18]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=77.4, Expect=1e-15]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=83.2, Expect=8e-18]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=80.1, Expect=7e-17]} {Smed: dd_Smed_v6_8675_0_1, dd_Smed_v6_8675_0_1, [Score=76.3, Expect=8e-16]} {RNA1509_20684, RNA1509_22922, RNA1509_30592, RNA1509_45694} {RNA1310_10520.1, RNA1509_20684, RNA1509_22922, RNA1509_30592, RNA1509_45694} {RNA1509_20684, RNA1509_22922, RNA1509_30592, RNA1509_45694, RNA815_22144}
3. MligTC455_38040 187 3.9 Mlig455_050349

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.323

Region-enriched R2: 2.513/0.04185

PITPNM1 0.962 - - - - - 0.962 Mlig455_050349 {REF} {Length: 5662} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=356.4]; DDHD domain [PF02862.19, score=125.7]} {Human: ENSG00000110697, PITPNM1, phosphatidylinositol transfer protein membrane associated 1, [Score=913, Expect=0.0]} {Mouse: ENSMUSG00000097096, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [RH, Score=918, Expect=0.0]; ENSMUSG00000024851, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [RH, Score=918, Expect=0.0]} {Dmel: FBgn0003218, rdgB, retinal degeneration B, [Score=593, Expect=0.0]} {Celegans: WBGene00010813, pitp-1, PhosphatidylInositol Transfer Protein family, [RH, Score=372, Expect=2e-109]} {Smed: dd_Smed_v6_7211_0_2, dd_Smed_v6_7211_0_2, [RH, Score=930, Expect=0.0]} {RNA1509_13228} {RNA1310_1072} {RNA815_6615}
4. MligTC455_29923 80 1.66 Mlig455_027692

Neo: -

Age: -

MAP3K19 0.957 - - - - 0.957 - Mlig455_027692 {REF} {Length: 3167} {Pfam: Protein kinase domain [PF00069.27, score=168.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=126.8]; Ankyrin repeats (3 copies) [PF12796.9, score=77.2]; Ankyrin repeats (many copies) [PF13857.8, score=63.1]; Ankyrin repeats (many copies) [PF13637.8, score=61.3]; Ankyrin repeat [PF13606.8, score=42.6]; Ankyrin repeat [PF00023.32, score=36.8]; Fungal protein kinase [PF17667.3, score=26.8]; ABC1 atypical kinase-like domain [PF03109.18, score=19.5]; Kinase-like [PF14531.8, score=19.0]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=134, Expect=1e-32]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=128, Expect=8e-30]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=124, Expect=1e-28]; ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=123, Expect=2e-28]} {Dmel: FBgn0024329, Mekk1, [Score=127, Expect=1e-29]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=125, Expect=2e-29]} {Smed: dd_Smed_v6_5198_0_1, dd_Smed_v6_5198_0_1, [Score=114, Expect=5e-26]} {RNA1509_27731} {RNA1310_26361.1} {RNA815_16459}
5. MligTC455_03449 11 0.24 Mlig455_066657

Neo: -

Age: -

SCNN1B 0.953 - - - - 0.953 - Mlig455_066657 {REF} {Length: 2141} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=195.5]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=80.1, Expect=5e-15]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=58.5, Expect=2e-08]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=81.6, Expect=5e-16]} {Smed: dd_Smed_v6_34707_0_1, dd_Smed_v6_34707_0_1, [Score=117, Expect=2e-27]} {RNA1310_36738} {RNA815_32966}
6. MligTC455_57200 6 0.12 Mlig455_019328

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_019328 {REF} {Length: 424} {NoTransDecoderORF}
7. MligTC455_38152 19 0.39 Mlig455_037918

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_037918 {REF} {Length: 1280} {Pfam: Phospholipase A2 [PF00068.21, score=80.2]} {Mouse: ENSMUSG00000058908, Pla2g2a, phospholipase A2, group IIA (platelets, synovial fluid), [RH, Score=60.1, Expect=2e-11]} {Celegans: WBGene00007419, C07E3.9, Phospholipase A(2), [RH, Score=66.2, Expect=7e-14]} {RNA1310_94430}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA