TomoSeq data search

Data search

Results for MligTC455_38274

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_38274	39	0.82	Mlig455_006125	Neo: - Age: -		Mlig455_006125 {REF} {Length: 936} {NoTransDecoderORF} {RNA1509_20101} {RNA1310_14959.1} {RNA815_22311}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_38274

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.457	1.203	1.00000	1.00000
RegionR2	4.925	1.203	0.00612	0.07341
RegionR3	-0.497	1.203	0.95981	1.00000
RegionR4	-2.682	1.203	1.00000	1.00000
RegionR5	1.302	1.203	0.38878	0.74466
RegionR6	1.788	1.203	0.21634	0.79515
RegionR7	2.452	1.203	0.17390	0.76572
RegionR8	-0.831	1.203	0.79472	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.045	1.203	0.99321	1.00000
RegenerationR2	2.484	1.203	0.02990	0.28435
RegenerationR3	5.55	1.203	0.00021	0.01887
RegenerationR4	1.925	1.203	0.15684	0.58830
RegenerationR5	1.733	1.203	0.06314	0.39830
RegenerationR6	2.049	1.203	0.15422	0.48047
RegenerationBL	2.995	1.203	0.17814	0.50673
RegenerationTP	3.862	1.203	0.10033	0.49288

Genes with expression patterns similar to MligTC455_38274

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38274	39	0.82	Mlig455_006125	Neo: - Age: -		4	1.000	1.000	-	-	1.000	1.000	Mlig455_006125 {REF} {Length: 936} {NoTransDecoderORF} {RNA1509_20101} {RNA1310_14959.1} {RNA815_22311}
2.	MligTC455_37458	120	2.49	Mlig455_037280, Mlig455_042333, Mlig455_055120	Neo: - Age: -	CUBN	0.962	-	-	-	-	-	0.962	Mlig455_037280 {REF} {Length: 3846} {Pfam: CUB domain [PF00431.22, score=68.6]} {Human: ENSG00000107611, CUBN, cubilin, [Score=56.6, Expect=3e-08]; ENSG00000157211, CDCP2, CUB domain containing protein 2, [Score=55.5, Expect=5e-08]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=55.5, Expect=6e-08]} {Dmel: FBgn0031879, uif, uninflatable, [Score=69.3, Expect=1e-12]} {Celegans: WBGene00011222, R10H10.3, [RH, Score=53.1, Expect=9e-08]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=52.0, Expect=3e-07]} {RNA1509_23859} {RNA1310_6101.1} {RNA815_2733.1} Mlig455_042333 {REF} {Length: 1368} {Pfam: Integrase core domain [PF00665.28, score=32.9]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=60.1, Expect=4e-11]} {RNA1509_21400} {RNA1310_6101.1} {RNA815_2733.1} Mlig455_055120 {REF} {Length: 884} {NoTransDecoderORF} {RNA1509_23859} {RNA1310_25192} {RNA815_24957.1}
3.	MligTC455_49645	1067	22.23	Mlig455_032173	Neo: - Age: -	MEF2D	0.962	-	-	-	-	0.962	-	Mlig455_032173 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: SRF-type transcription factor (DNA-binding and dimerisation domain) [PF00319.20, score=87.0]} {Human: ENSG00000116604, MEF2D, myocyte enhancer factor 2D, [Score=171, Expect=2e-50]; ENSG00000213999, MEF2B, myocyte enhancer factor 2B, [Score=170, Expect=3e-51]; ENSG00000064489, BORCS8-MEF2B, BORCS8-MEF2B readthrough, [Score=170, Expect=3e-51]; ENSG00000068305, MEF2A, myocyte enhancer factor 2A, [Score=167, Expect=3e-49]; ENSG00000081189, MEF2C, myocyte enhancer factor 2C, [Score=166, Expect=1e-52]} {Mouse: ENSMUSG00000001419, Mef2d, myocyte enhancer factor 2D, [Score=171, Expect=1e-50]; ENSMUSG00000030557, Mef2a, myocyte enhancer factor 2A, [Score=167, Expect=2e-49]; ENSMUSG00000005583, Mef2c, myocyte enhancer factor 2C, [Score=166, Expect=4e-53]} {Dmel: FBgn0011656, Mef2, Myocyte enhancer factor 2, [Score=162, Expect=3e-47]} {Celegans: WBGene00003182, mef-2, Related to vertebrate MEF2 transcription factor, [Score=174, Expect=2e-53]} {Smed: dd_Smed_v6_6889_0_1, dd_Smed_v6_6889_0_1, [Score=152, Expect=4e-44]} {RNA1509_34849, RNA1509_8265} {RNA1310_21974.1, RNA1509_34849} {RNA1509_34849, RNA815_4359.2}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_38274

0.82

Mlig455_006125

Neo: -

Age: -

1.000

Mlig455_006125 {REF} {Length: 936} {NoTransDecoderORF} {RNA1509_20101} {RNA1310_14959.1} {RNA815_22311}

MligTC455_37458

120

2.49

Mlig455_037280, Mlig455_042333, Mlig455_055120

Neo: -

Age: -

CUBN

0.962

Mlig455_037280 {REF} {Length: 3846} {Pfam: CUB domain [PF00431.22, score=68.6]} {Human: ENSG00000107611, CUBN, cubilin, [Score=56.6, Expect=3e-08]; ENSG00000157211, CDCP2, CUB domain containing protein 2, [Score=55.5, Expect=5e-08]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=55.5, Expect=6e-08]} {Dmel: FBgn0031879, uif, uninflatable, [Score=69.3, Expect=1e-12]} {Celegans: WBGene00011222, R10H10.3, [RH, Score=53.1, Expect=9e-08]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=52.0, Expect=3e-07]} {RNA1509_23859} {RNA1310_6101.1} {RNA815_2733.1}

Mlig455_042333 {REF} {Length: 1368} {Pfam: Integrase core domain [PF00665.28, score=32.9]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=60.1, Expect=4e-11]} {RNA1509_21400} {RNA1310_6101.1} {RNA815_2733.1}

Mlig455_055120 {REF} {Length: 884} {NoTransDecoderORF} {RNA1509_23859} {RNA1310_25192} {RNA815_24957.1}

MligTC455_49645

1067

22.23

Mlig455_032173

Neo: -

Age: -

MEF2D

0.962

Mlig455_032173 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: SRF-type transcription factor (DNA-binding and dimerisation domain) [PF00319.20, score=87.0]} {Human: ENSG00000116604, MEF2D, myocyte enhancer factor 2D, [Score=171, Expect=2e-50]; ENSG00000213999, MEF2B, myocyte enhancer factor 2B, [Score=170, Expect=3e-51]; ENSG00000064489, BORCS8-MEF2B, BORCS8-MEF2B readthrough, [Score=170, Expect=3e-51]; ENSG00000068305, MEF2A, myocyte enhancer factor 2A, [Score=167, Expect=3e-49]; ENSG00000081189, MEF2C, myocyte enhancer factor 2C, [Score=166, Expect=1e-52]} {Mouse: ENSMUSG00000001419, Mef2d, myocyte enhancer factor 2D, [Score=171, Expect=1e-50]; ENSMUSG00000030557, Mef2a, myocyte enhancer factor 2A, [Score=167, Expect=2e-49]; ENSMUSG00000005583, Mef2c, myocyte enhancer factor 2C, [Score=166, Expect=4e-53]} {Dmel: FBgn0011656, Mef2, Myocyte enhancer factor 2, [Score=162, Expect=3e-47]} {Celegans: WBGene00003182, mef-2, Related to vertebrate MEF2 transcription factor, [Score=174, Expect=2e-53]} {Smed: dd_Smed_v6_6889_0_1, dd_Smed_v6_6889_0_1, [Score=152, Expect=4e-44]} {RNA1509_34849, RNA1509_8265} {RNA1310_21974.1, RNA1509_34849} {RNA1509_34849, RNA815_4359.2}