TomoSeq data search

Data search

Results for MligTC455_49645

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49645

1067

22.23

Mlig455_032173

Neo: -

Age: -

MEF2D

Mlig455_032173 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: SRF-type transcription factor (DNA-binding and dimerisation domain) [PF00319.20, score=87.0]} {Human: ENSG00000116604, MEF2D, myocyte enhancer factor 2D, [Score=171, Expect=2e-50]; ENSG00000213999, MEF2B, myocyte enhancer factor 2B, [Score=170, Expect=3e-51]; ENSG00000064489, BORCS8-MEF2B, BORCS8-MEF2B readthrough, [Score=170, Expect=3e-51]; ENSG00000068305, MEF2A, myocyte enhancer factor 2A, [Score=167, Expect=3e-49]; ENSG00000081189, MEF2C, myocyte enhancer factor 2C, [Score=166, Expect=1e-52]} {Mouse: ENSMUSG00000001419, Mef2d, myocyte enhancer factor 2D, [Score=171, Expect=1e-50]; ENSMUSG00000030557, Mef2a, myocyte enhancer factor 2A, [Score=167, Expect=2e-49]; ENSMUSG00000005583, Mef2c, myocyte enhancer factor 2C, [Score=166, Expect=4e-53]} {Dmel: FBgn0011656, Mef2, Myocyte enhancer factor 2, [Score=162, Expect=3e-47]} {Celegans: WBGene00003182, mef-2, Related to vertebrate MEF2 transcription factor, [Score=174, Expect=2e-53]} {Smed: dd_Smed_v6_6889_0_1, dd_Smed_v6_6889_0_1, [Score=152, Expect=4e-44]} {RNA1509_34849, RNA1509_8265} {RNA1310_21974.1, RNA1509_34849} {RNA1509_34849, RNA815_4359.2}

Cumulative graph for MligTC455_49645

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.237	4.583	0.76407	1.00000
RegionR2	-0.043	4.583	0.90963	1.00000
RegionR3	-0.352	4.583	0.27840	0.82212
RegionR4	0.618	4.583	0.09608	0.29915
RegionR5	0.015	4.583	0.95960	1.00000
RegionR6	0.296	4.583	0.34020	0.92749
RegionR7	-0.495	4.583	0.24071	0.86481
RegionR8	-0.276	4.583	0.56244	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.919	4.583	0.44506	1.00000
RegenerationR2	0.221	4.583	0.50800	0.87462
RegenerationR3	0.35	4.583	0.35452	0.77312
RegenerationR4	-0.409	4.583	0.28789	0.73251
RegenerationR5	-0.133	4.583	0.70518	0.95353
RegenerationR6	-0.443	4.583	0.24782	0.59607
RegenerationBL	0.099	4.583	0.82096	1.00000
RegenerationTP	-0.033	4.583	0.94524	1.00000

Genes with expression patterns similar to MligTC455_49645

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49645	1067	22.23	Mlig455_032173	Neo: - Age: -	MEF2D	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_032173 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: SRF-type transcription factor (DNA-binding and dimerisation domain) [PF00319.20, score=87.0]} {Human: ENSG00000116604, MEF2D, myocyte enhancer factor 2D, [Score=171, Expect=2e-50]; ENSG00000213999, MEF2B, myocyte enhancer factor 2B, [Score=170, Expect=3e-51]; ENSG00000064489, BORCS8-MEF2B, BORCS8-MEF2B readthrough, [Score=170, Expect=3e-51]; ENSG00000068305, MEF2A, myocyte enhancer factor 2A, [Score=167, Expect=3e-49]; ENSG00000081189, MEF2C, myocyte enhancer factor 2C, [Score=166, Expect=1e-52]} {Mouse: ENSMUSG00000001419, Mef2d, myocyte enhancer factor 2D, [Score=171, Expect=1e-50]; ENSMUSG00000030557, Mef2a, myocyte enhancer factor 2A, [Score=167, Expect=2e-49]; ENSMUSG00000005583, Mef2c, myocyte enhancer factor 2C, [Score=166, Expect=4e-53]} {Dmel: FBgn0011656, Mef2, Myocyte enhancer factor 2, [Score=162, Expect=3e-47]} {Celegans: WBGene00003182, mef-2, Related to vertebrate MEF2 transcription factor, [Score=174, Expect=2e-53]} {Smed: dd_Smed_v6_6889_0_1, dd_Smed_v6_6889_0_1, [Score=152, Expect=4e-44]} {RNA1509_34849, RNA1509_8265} {RNA1310_21974.1, RNA1509_34849} {RNA1509_34849, RNA815_4359.2}
2.	MligTC455_29281	1359	28.31	Mlig455_000186, Mlig455_067707	Neo: - Age: -	RPS20, SLMAP	1.792	-	-	-	0.975	-	0.817	Mlig455_000186 {REF} {Length: 4189} {Pfam: FHA domain [PF00498.28, score=65.5]; Fez1 [PF06818.17, score=20.8]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=19.0]} {Human: ENSG00000163681, SLMAP, sarcolemma associated protein, [RH, Score=254, Expect=7e-74]} {Mouse: ENSMUSG00000021870, Slmap, sarcolemma associated protein, [RH, Score=252, Expect=2e-73]} {Dmel: FBgn0040011, Slmap, Sarcolemma associated protein, [Score=186, Expect=1e-49]} {Celegans: WBGene00019766, M4.1, [RH, Score=202, Expect=7e-57]} {Smed: dd_Smed_v6_3763_0_5, dd_Smed_v6_3763_0_5, [Score=247, Expect=3e-75]} {RNA1509_20169} {RNA1310_5284.1} {RNA815_8488} Mlig455_067707 {REF} {Length: 4007} {TRANSSPLICED} {Pfam: Ribosomal protein S10p/S20e [PF00338.24, score=51.0]} {Human: ENSG00000008988, RPS20, ribosomal protein S20, [Score=132, Expect=2e-36]} {Mouse: ENSMUSG00000028234, Rps20, ribosomal protein S20, [Score=132, Expect=2e-36]} {Dmel: FBgn0019936, RpS20, Ribosomal protein S20, [Score=128, Expect=6e-35]} {Celegans: WBGene00004489, rps-20, Ribosomal Protein, Small subunit, [Score=128, Expect=3e-35]} {Smed: dd_Smed_v6_123_0_2, dd_Smed_v6_123_0_2, [Score=107, Expect=1e-27]} {RNA1509_20169} {RNA1310_5284.1} {RNA815_8488}
3.	MligTC455_51357	410	8.55	Mlig455_064530	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.532	ANKRD44	0.974	-	-	-	-	-	0.974	Mlig455_064530 {REF} {Length: 2291} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.2]; Ankyrin repeats (many copies) [PF13637.8, score=105.0]; Ankyrin repeat [PF13606.8, score=78.0]; Ankyrin repeat [PF00023.32, score=59.6]; Ankyrin repeats (many copies) [PF13857.8, score=55.4]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=79.3, Expect=1e-14]} {Mouse: ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=75.1, Expect=1e-13]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=53.1, Expect=7e-07]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=71.2, Expect=1e-12]} {Smed: dd_Smed_v6_29517_0_1, dd_Smed_v6_29517_0_1, [Score=56.2, Expect=4e-08]} {RNA1509_26353, RNA1509_26359} {RNA1310_7390.2, RNA1509_26353, RNA1509_26359} {RNA1509_26353, RNA1509_26359, RNA815_20018}
4.	MligTC455_38274	39	0.82	Mlig455_006125	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_006125 {REF} {Length: 936} {NoTransDecoderORF} {RNA1509_20101} {RNA1310_14959.1} {RNA815_22311}
5.	Mlig999001.1						0.958	-	-	-	-	-	0.958
6.	MligTC455_44562	781	16.28	Mlig455_022754, Mlig455_051918	Neo: - Age: -	ADAM29	0.958	-	-	-	-	0.958	-	Mlig455_022754 {REF} {Length: 3264} {TRANSSPLICED} {RNA1509_32909} {RNA1310_4858.2} {RNA815_3311.1} Mlig455_051918 {REF} {Length: 2099} {Human: ENSG00000168594, ADAM29, ADAM metallopeptidase domain 29, [Score=53.9, Expect=6e-07]} {RNA1509_44884} {RNA1310_57540.1} {RNA815_1526.1}
7.	MligTC455_27907	368	7.67	Mlig455_022225	Neo: - Age: -	MAPK3	0.956	-	-	-	-	0.956	-	Mlig455_022225 {REF} {Length: 3775} {Pfam: Protein kinase domain [PF00069.27, score=233.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=121.1]; Phosphotransferase enzyme family [PF01636.25, score=19.5]; ABC1 atypical kinase-like domain [PF03109.18, score=19.0]} {Human: ENSG00000102882, MAPK3, mitogen-activated protein kinase 3, [RH, Score=575, Expect=0.0]; ENSG00000100030, MAPK1, mitogen-activated protein kinase 1, [RH, Score=570, Expect=0.0]} {Mouse: ENSMUSG00000063065, Mapk3, mitogen-activated protein kinase 3, [RH, Score=573, Expect=0.0]; ENSMUSG00000063358, Mapk1, mitogen-activated protein kinase 1, [RH, Score=571, Expect=0.0]} {Dmel: FBgn0003256, rl, rolled, [RH, Score=575, Expect=0.0]} {Celegans: WBGene00003401, mpk-1, Mitogen-activated protein kinase mpk-1, [Score=562, Expect=0.0]} {Smed: dd_Smed_v6_9632_0_1, dd_Smed_v6_9632_0_1, [RH, Score=597, Expect=0.0]} {RNA1509_15152} {RNA1310_12000, RNA1509_15152} {RNA1509_15152, RNA815_11191}
8.	MligTC455_28322	108231	2254.81	Mlig455_048436	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.223	TUBA1A	0.953	-	-	-	-	-	0.953	Mlig455_048436 {REF} {Length: 2371} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=231.1]; Tubulin C-terminal domain [PF03953.19, score=173.7]; Tubulin domain [PF14881.8, score=18.7]} {Human: ENSG00000167552, TUBA1A, tubulin alpha 1a, [RH, Score=934, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [RH, Score=931, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [RH, Score=924, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [RH, Score=924, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [RH, Score=907, Expect=0.0]; ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=888, Expect=0.0]} {Mouse: ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [RH, Score=934, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [RH, Score=931, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [RH, Score=924, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [RH, Score=924, Expect=0.0]; ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [RH, Score=917, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [RH, Score=919, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=853, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_2, dd_Smed_v6_10947_0_2, [RH, Score=930, Expect=0.0]} {RNA1509_11189, RNA1509_17022, RNA1509_37519, RNA1509_43131, RNA1509_659, RNA1509_7393, RNA1509_785, RNA1509_835, RNA1509_9} {RNA1310_10339.1, RNA1509_11189, RNA1509_17022, RNA1509_37519, RNA1509_43131, RNA1509_659, RNA1509_7393, RNA1509_785, RNA1509_835, RNA1509_9} {RNA1509_11189, RNA1509_17022, RNA1509_37519, RNA1509_43131, RNA1509_659, RNA1509_7393, RNA1509_785, RNA1509_835, RNA1509_9, RNA815_3906}
9.	MligTC455_49457	1225	25.52	Mlig455_005617, Mlig455_014432, Mlig455_070181	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.375		0.952	-	-	-	-	0.952	-	Mlig455_005617 {REF} {Length: 1304} {RNA1509_48463} {RNA1310_46663, RNA1509_48463} {RNA1509_48463, RNA815_4404.1} Mlig455_014432 {REF} {Length: 1338} {RNA1509_48463} {RNA1310_46663} {RNA815_4404.1} Mlig455_070181 {REF} {Length: 1176} {RNA1509_47545, RNA1509_48463} {RNA1310_46663, RNA1509_47545} {RNA1509_47545, RNA815_4404.1}
10.	MligTC455_28323	107894	2247.78	Mlig455_048581	Neo: - Age: Down-Down-Up	TUBA1A	0.951	-	-	-	-	-	0.951	Mlig455_048581 {REF} {Length: 2500} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=231.1]; Tubulin C-terminal domain [PF03953.19, score=173.7]; Tubulin domain [PF14881.8, score=18.7]} {Human: ENSG00000167552, TUBA1A, tubulin alpha 1a, [RH, Score=934, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [RH, Score=931, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [RH, Score=924, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [RH, Score=924, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [RH, Score=907, Expect=0.0]; ENSG00000167553, TUBA1C, tubulin alpha 1c, [RH, Score=888, Expect=0.0]} {Mouse: ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [RH, Score=934, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [RH, Score=931, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [RH, Score=924, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [RH, Score=924, Expect=0.0]; ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [RH, Score=917, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [RH, Score=919, Expect=0.0]} {Celegans: WBGene00003175, mec-12, Tubulin alpha-3 chain Detyrosinated tubulin alpha-3 chain, [RH, Score=853, Expect=0.0]} {Smed: dd_Smed_v6_10947_0_2, dd_Smed_v6_10947_0_2, [RH, Score=930, Expect=0.0]} {RNA1509_10388, RNA1509_14297, RNA1509_33363, RNA1509_9} {RNA1310_10339.1, RNA1509_10388, RNA1509_14297, RNA1509_33363} {RNA1509_10388, RNA1509_14297, RNA1509_33363, RNA815_3906}
11.	MligTC455_33996	177	3.68	Mlig455_065865	Neo: - Age: logFC(26M/2M)=-0.441		0.951	-	-	-	-	0.951	-	Mlig455_065865 {REF} {Length: 5440} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=226.2]; Ankyrin repeats (many copies) [PF13637.8, score=186.3]; Ankyrin repeat [PF13606.8, score=90.6]; Family of unknown function (DUF6189) [PF19688.1, score=74.6]; 3,4-dihydroxy-2-butanone 4-phosphate synthase [PF00926.21, score=47.3]; Phage protein GP46 [PF07409.14, score=42.4]} {RNA1509_28890} {RNA1310_21309.1} {RNA815_12859.1}

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