TomoSeq data search

Data search

Results for MligTC455_38277

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_38277	48	1.01	Mlig455_029929	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.759		Mlig455_029929 {REF} {Length: 2338} {Pfam: Alpha-kinase family [PF02816.20, score=24.0]} {RNA1509_12880} {RNA1310_15981.2} {RNA815_6188}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_38277

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.674	1.413	0.38155	1.00000
RegionR2	-0.056	1.413	0.89180	1.00000
RegionR3	2.61	1.413	0.00588	0.10628
RegionR4	1.192	1.413	0.36996	0.69319
RegionR5	0.252	1.413	0.75436	1.00000
RegionR6	-0.446	1.413	0.95555	1.00000
RegionR7	0.214	1.413	0.82128	1.00000
RegionR8	0.908	1.413	0.59318	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.224	1.413	0.99988	1.00000
RegenerationR2	2.17	1.413	0.02584	0.26549
RegenerationR3	-2.034	1.413	0.07056	0.44518
RegenerationR4	-2.07	1.413	0.09327	0.47631
RegenerationR5	-0.365	1.413	0.71746	0.95843
RegenerationR6	0.551	1.413	0.73663	0.94551
RegenerationBL	-2.887	1.413	0.29187	0.65388
RegenerationTP	1.769	1.413	0.18069	0.61595

Genes with expression patterns similar to MligTC455_38277

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38277	48	1.01	Mlig455_029929	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.759		3	1.000	1.000	-	-	-	1.000	Mlig455_029929 {REF} {Length: 2338} {Pfam: Alpha-kinase family [PF02816.20, score=24.0]} {RNA1509_12880} {RNA1310_15981.2} {RNA815_6188}
2.	MligTC455_42606	587	12.23	Mlig455_028247	Neo: - Age: - Region-enriched R7: 3.014/0.00027 Region-enriched R6: 2.443/0.01165		0.975	-	-	-	-	-	0.975	Mlig455_028247 {REF} {Length: 1418} {Pfam: Immunoreceptor tyrosine-based activation motif [PF02189.17, score=84.5]} {RNA1509_19563, RNA1509_30809, RNA1509_35935} {RNA1310_42765.2, RNA1509_19563, RNA1509_30809, RNA1509_35935} {RNA1509_19563, RNA1509_30809, RNA1509_35935, RNA815_22214}
3.	MligTC455_37269	173	3.61	Mlig455_020047	Neo: - Age: -	CASP3	0.957	-	-	-	-	-	0.957	Mlig455_020047 {REF} {Length: 2828} {Pfam: Caspase domain [PF00656.24, score=94.7]; Ankyrin repeats (3 copies) [PF12796.9, score=79.1]; Ankyrin repeats (many copies) [PF13857.8, score=62.0]; Ankyrin repeats (many copies) [PF13637.8, score=58.0]; Ankyrin repeat [PF13606.8, score=40.7]; Ankyrin repeat [PF00023.32, score=31.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=111, Expect=1e-26]; ENSG00000003400, CASP10, caspase 10, [Score=107, Expect=9e-24]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=106, Expect=5e-25]; ENSMUSG00000025076, Casp7, caspase 7, [Score=106, Expect=7e-25]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=96.3, Expect=2e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=81.6, Expect=9e-17]} {Smed: dd_Smed_v6_10883_0_1, dd_Smed_v6_10883_0_1, [Score=107, Expect=1e-24]} {RNA1509_54818} {RNA1310_7187} {RNA815_8712}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_38277

1.01

Mlig455_029929

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.759

1.000

Mlig455_029929 {REF} {Length: 2338} {Pfam: Alpha-kinase family [PF02816.20, score=24.0]} {RNA1509_12880} {RNA1310_15981.2} {RNA815_6188}

MligTC455_42606

587

12.23

Mlig455_028247

Neo: -

Age: -

Region-enriched R7: 3.014/0.00027
Region-enriched R6: 2.443/0.01165

0.975

Mlig455_028247 {REF} {Length: 1418} {Pfam: Immunoreceptor tyrosine-based activation motif [PF02189.17, score=84.5]} {RNA1509_19563, RNA1509_30809, RNA1509_35935} {RNA1310_42765.2, RNA1509_19563, RNA1509_30809, RNA1509_35935} {RNA1509_19563, RNA1509_30809, RNA1509_35935, RNA815_22214}

MligTC455_37269

173

3.61

Mlig455_020047

Neo: -

Age: -

CASP3

0.957

Mlig455_020047 {REF} {Length: 2828} {Pfam: Caspase domain [PF00656.24, score=94.7]; Ankyrin repeats (3 copies) [PF12796.9, score=79.1]; Ankyrin repeats (many copies) [PF13857.8, score=62.0]; Ankyrin repeats (many copies) [PF13637.8, score=58.0]; Ankyrin repeat [PF13606.8, score=40.7]; Ankyrin repeat [PF00023.32, score=31.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=111, Expect=1e-26]; ENSG00000003400, CASP10, caspase 10, [Score=107, Expect=9e-24]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=106, Expect=5e-25]; ENSMUSG00000025076, Casp7, caspase 7, [Score=106, Expect=7e-25]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=96.3, Expect=2e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=81.6, Expect=9e-17]} {Smed: dd_Smed_v6_10883_0_1, dd_Smed_v6_10883_0_1, [Score=107, Expect=1e-24]} {RNA1509_54818} {RNA1310_7187} {RNA815_8712}