M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_42606

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_42606 587 12.23 Mlig455_028247

Neo: -

Age: -

Region-enriched R7: 3.014/0.00027
Region-enriched R6: 2.443/0.01165

 Mlig455_028247 {REF} {Length: 1418} {Pfam: Immunoreceptor tyrosine-based activation motif [PF02189.17, score=84.5]} {RNA1509_19563, RNA1509_30809, RNA1509_35935} {RNA1310_42765.2, RNA1509_19563, RNA1509_30809, RNA1509_35935} {RNA1509_19563, RNA1509_30809, RNA1509_35935, RNA815_22214}

Cumulative graph for MligTC455_42606

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.846 3.832 0.05848 0.55832
RegionR2 0.082 3.832 0.82199 1.00000
RegionR3 -0.488 3.832 0.95311 1.00000
RegionR4 0.891 3.832 0.38926 0.71491
RegionR5 0.374 3.832 0.67013 1.00000
RegionR6 2.443 3.832 0.00017 0.01165
RegionR7 3.014 3.832 0.00000 0.00027
RegionR8 0.53 3.832 0.63174 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.322 3.832 0.29360 0.99121
RegenerationR2 0.252 3.832 0.67867 0.94856
RegenerationR3 -1.334 3.832 0.07147 0.44749
RegenerationR4 -1.18 3.832 0.08772 0.46487
RegenerationR5 -0.894 3.832 0.18094 0.61103
RegenerationR6 -0.739 3.832 0.21571 0.55989
RegenerationBL -1.311 3.832 0.06212 0.28937
RegenerationTP -0.412 3.832 0.56598 0.94203


Genes with expression patterns similar to MligTC455_42606

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_42606 587 12.23 Mlig455_028247

Neo: -

Age: -

Region-enriched R7: 3.014/0.00027
Region-enriched R6: 2.443/0.01165

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_028247 {REF} {Length: 1418} {Pfam: Immunoreceptor tyrosine-based activation motif [PF02189.17, score=84.5]} {RNA1509_19563, RNA1509_30809, RNA1509_35935} {RNA1310_42765.2, RNA1509_19563, RNA1509_30809, RNA1509_35935} {RNA1509_19563, RNA1509_30809, RNA1509_35935, RNA815_22214}
2. MligTC455_16387 315 6.57 Mlig455_017640, Mlig455_058958

Neo: -

Age: Down-Up-Down

 ZMYM1 2.501 - - 0.951 0.795 - 0.755

Mlig455_017640 {REF} {Length: 1887} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=72.8]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.9]} {Human: ENSG00000197056, ZMYM1, zinc finger MYM-type containing 1, [Score=63.9, Expect=2e-10]} {Mouse: ENSMUSG00000043872, Zmym1, zinc finger, MYM domain containing 1, [Score=53.9, Expect=2e-07]} {Smed: dd_Smed_v6_27814_0_2, dd_Smed_v6_27814_0_2, [Score=98.6, Expect=1e-24]} {RNA1509_38621} {RNA1310_17933.1} {RNA815_25414.1}

Mlig455_058958 {REF} {Length: 2000} {RNA1509_38621} {RNA1310_17933.1} {RNA815_25414.1}
3. MligTC455_18834 33 0.68 Mlig455_000603

Neo: -

Age: -

 2.465 0.730 0.781 - - 0.954 - Mlig455_000603 {REF} {Length: 1888} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.2]} {RNA1310_27913} {RNA815_25050}
4. MligTC455_19473 281 5.84 Mlig455_054301

Neo: -

Age: -

Region-enriched R7: 3.456/0.00000

 1.802 - - 0.962 0.840 - - Mlig455_054301 {REF} {Length: 1587} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.4]} {RNA1310_40703} {RNA815_56404}
5. MligTC455_19295 129 2.69 Mlig455_044440

Neo: -

Age: -

 CLEC6A 1.773 - - - 0.818 - 0.955 Mlig455_044440 {REF} {Length: 1377} {Human: ENSG00000205846, CLEC6A, C-type lectin domain containing 6A, [Score=50.1, Expect=7e-07]} {RNA1310_49243} {RNA815_28288}
6. MligTC455_18711 23 0.48 Mlig455_025487, Mlig455_025509, Mlig455_070529

Neo: -

Age: -

 1.728 - - - - 0.960 0.768

Mlig455_025487 {REF} {Length: 2041} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.7]} {RNA1509_40708} {RNA1310_26224} {RNA815_14744.1}

Mlig455_025509 {REF} {Length: 1175} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.7]} {RNA1509_40708} {RNA1310_26224} {RNA815_14744.1}

Mlig455_070529 {REF} {Length: 819} {RNA1509_42280} {RNA1310_22730} {RNA815_32971}
7. MligTC455_13206 10 0.2 Mlig455_018601, Mlig455_018615

Neo: -

Age: -

 0.986 - - - - 0.986 -

Mlig455_018601 {REF} {Length: 1042} {NoTransDecoderORF} {RNA1310_100887}

Mlig455_018615 {REF} {Length: 1012} {NoTransDecoderORF} {RNA1310_100887}
8. MligTC455_13973 6 0.13 Mlig455_062040

Neo: -

Age: -

 0.986 - - - - 0.986 - Mlig455_062040 {REF} {Length: 634} {NoTransDecoderORF} {RNA1509_47371}
9. MligTC455_14143 12 0.25 Mlig455_013538

Neo: -

Age: -

 0.986 - - - - 0.986 - Mlig455_013538 {REF} {Length: 951} {NoTransDecoderORF} {RNA1509_26163} {RNA1310_103321} {RNA815_47548}
10. MligTC455_16042 45 0.95 Mlig455_000892

Neo: -

Age: -

 0.986 - - - - 0.986 - Mlig455_000892 {REF} {Length: 487} {NoTransDecoderORF} {RNA1310_142782}
11. MligTC455_17645 48 1 Mlig455_008070

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.181

 0.986 - - - - 0.986 - Mlig455_008070 {REF} {Length: 1924} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=20.9]} {Smed: dd_Smed_v6_25359_0_1, dd_Smed_v6_25359_0_1, [Score=66.2, Expect=3e-12]} {RNA1509_7841} {RNA1310_25567} {RNA815_6213}
12. MligTC455_32102 22 0.45 Mlig455_036933

Neo: -

Age: Up-Down-Down

 0.986 - - - - 0.986 - Mlig455_036933 {REF} {Length: 2307} {RNA1509_41399} {RNA1310_15329} {RNA815_6647}
13. MligTC455_52002 18 0.37 Mlig455_015922

Neo: -

Age: -

 0.986 - - - - 0.986 - Mlig455_015922 {REF} {Length: 3702} {RNA1310_60405} {RNA815_40963}
14. MligTC455_08714 6 0.12 Mlig455_012167

Neo: -

Age: -

 0.984 - - - - 0.984 - Mlig455_012167 {REF} {Length: 312} {NoTransDecoderORF} {RNA1509_29268} {RNA1310_107364} {RNA815_51387}
15. MligTC455_09870 8 0.17 Mlig455_053392

Neo: -

Age: -

 0.984 - - - - 0.984 - Mlig455_053392 {REF} {Length: 338} {NoTransDecoderORF} {RNA1310_87210}
16. MligTC455_00203 3 0.06 Mlig455_051710

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_051710 {REF} {Length: 302} {NoTransDecoderORF}
17. MligTC455_02977 9 0.19 Mlig455_030233, Mlig455_068012

Neo: -

Age: -

 0.981 - - - - 0.981 -

Mlig455_030233 {REF} {Length: 1705} {Pfam: Glycine rich protein [PF12810.9, score=28.6]} {RNA1310_95913}

Mlig455_068012 {REF} {Length: 1348} {Pfam: Glycine rich protein [PF12810.9, score=29.2]} {RNA1310_95913}
18. MligTC455_11764 3 0.05 Mlig455_038701

Neo: -

Age: -

 ASIC5 0.981 - - - - 0.981 - Mlig455_038701 {REF} {Length: 2030} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=188.7]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=64.3, Expect=3e-10]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=64.7, Expect=2e-10]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=63.2, Expect=6e-10]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=77.8, Expect=7e-15]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=105, Expect=8e-24]} {RNA1310_63403} {RNA815_41862}
19. MligTC455_13276 3 0.06 Mlig455_023464

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_023464 {REF} {Length: 339} {NoTransDecoderORF} {RNA1310_137491}
20. MligTC455_14934 36 0.76 Mlig455_005168

Neo: -

Age: -

Regeneration-upregulated R2: 5.261

Regeneration-enriched R2: 5.261

 0.981 - - - - 0.981 - Mlig455_005168 {REF} {Length: 1210} {RNA1509_7696} {RNA1310_27828} {RNA815_12648}
21. MligTC455_18043 7 0.15 Mlig455_057278

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_057278 {REF} {Length: 635} {NoTransDecoderORF} {RNA1509_36910} {RNA1310_134608}
22. MligTC455_39819 11 0.24 Mlig455_020402

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_020402 {REF} {Length: 1516}
23. MligTC455_57301 6 0.13 Mlig455_045739

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_045739 {REF} {Length: 397} {NoTransDecoderORF} {RNA1310_134600}
24. MligTC455_03139 8 0.16 Mlig455_039544

Neo: -

Age: -

 PRR9 0.976 - - - - 0.976 - Mlig455_039544 {REF} {Length: 646} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=48.5, Expect=2e-07]}
25. MligTC455_38277 48 1.01 Mlig455_029929

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.759

 0.975 - - - - - 0.975 Mlig455_029929 {REF} {Length: 2338} {Pfam: Alpha-kinase family [PF02816.20, score=24.0]} {RNA1509_12880} {RNA1310_15981.2} {RNA815_6188}
26. MligTC455_37269 173 3.61 Mlig455_020047

Neo: -

Age: -

 CASP3 0.973 - - - - - 0.973 Mlig455_020047 {REF} {Length: 2828} {Pfam: Caspase domain [PF00656.24, score=94.7]; Ankyrin repeats (3 copies) [PF12796.9, score=79.1]; Ankyrin repeats (many copies) [PF13857.8, score=62.0]; Ankyrin repeats (many copies) [PF13637.8, score=58.0]; Ankyrin repeat [PF13606.8, score=40.7]; Ankyrin repeat [PF00023.32, score=31.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=111, Expect=1e-26]; ENSG00000003400, CASP10, caspase 10, [Score=107, Expect=9e-24]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=106, Expect=5e-25]; ENSMUSG00000025076, Casp7, caspase 7, [Score=106, Expect=7e-25]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=96.3, Expect=2e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=81.6, Expect=9e-17]} {Smed: dd_Smed_v6_10883_0_1, dd_Smed_v6_10883_0_1, [Score=107, Expect=1e-24]} {RNA1509_54818} {RNA1310_7187} {RNA815_8712}
27. MligTC455_37343 240 4.99 Mlig455_024086

Neo: -

Age: Up-Down-Up

Region-enriched R8: 2.659/0.04266

 0.972 - - - - - 0.972 Mlig455_024086 {REF} {Length: 4209} {RNA1509_36528, RNA1509_59718} {RNA1310_12514, RNA1509_36528, RNA1509_59718} {RNA1509_36528, RNA1509_59718, RNA815_21020}
28. MligTC455_08229 4 0.08 Mlig455_041581

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_041581 {REF} {Length: 305} {NoTransDecoderORF} {tRNA: Trp(CCA), score=71.2}
29. MligTC455_14568 4 0.07 Mlig455_026076

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_026076 {REF} {Length: 794} {NoTransDecoderORF} {RNA1310_55322}
30. MligTC455_24254 36 0.75 Mlig455_022833, Mlig455_052911

Neo: -

Age: -

 0.971 - - - - 0.971 -

Mlig455_022833 {REF} {Length: 3826} {RNA1509_37106} {RNA1310_20119} {RNA815_32661}

Mlig455_052911 {REF} {Length: 373} {NoTransDecoderORF} {RNA1509_43679} {RNA1310_11574} {RNA815_11715.1}
31. MligTC455_53302 150 3.13 Mlig455_029229, Mlig455_035734

Neo: -

Age: -

 PKN1 0.971 - - 0.971 - - -

Mlig455_029229 {REF} {Length: 4680} {TRANSSPLICED} {Pfam: Hr1 repeat [PF02185.18, score=58.0]; Up-regulated During Septation [PF15456.8, score=21.0]} {Human: ENSG00000123143, PKN1, protein kinase N1, [Score=185, Expect=7e-50]; ENSG00000065243, PKN2, protein kinase N2, [Score=182, Expect=5e-50]} {Mouse: ENSMUSG00000057672, Pkn1, protein kinase N1, [Score=181, Expect=2e-48]; ENSMUSG00000004591, Pkn2, protein kinase N2, [Score=179, Expect=9e-48]} {Dmel: FBgn0020621, Pkn, Protein kinase N, [Score=161, Expect=5e-42]} {RNA1509_11806} {RNA1310_1971.1} {RNA815_4789}

Mlig455_035734 {REF} {Length: 5644} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=200.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=127.5]; Hr1 repeat [PF02185.18, score=55.4]; Protein kinase C terminal domain [PF00433.26, score=37.7]; Kinase-like [PF14531.8, score=18.9]} {Human: ENSG00000123143, PKN1, protein kinase N1, [RH, Score=637, Expect=0.0]; ENSG00000065243, PKN2, protein kinase N2, [RH, Score=626, Expect=0.0]} {Mouse: ENSMUSG00000057672, Pkn1, protein kinase N1, [RH, Score=638, Expect=0.0]; ENSMUSG00000004591, Pkn2, protein kinase N2, [RH, Score=624, Expect=0.0]} {Dmel: FBgn0020621, Pkn, Protein kinase N, [Score=458, Expect=9e-151]} {Celegans: WBGene00009793, pkn-1, Protein Kinase N (PKN) homolog, [RH, Score=448, Expect=4e-142]} {Smed: dd_Smed_v6_7015_0_2, dd_Smed_v6_7015_0_2, [RH, Score=332, Expect=3e-98]} {RNA1509_11806} {RNA1310_1971.1} {RNA815_4789}
32. MligTC455_11330 17 0.35 Mlig455_030268

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_030268 {REF} {Length: 2941} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.8]} {RNA1509_30357} {RNA1310_28164} {RNA815_12945.1}
33. MligTC455_56577 6 0.12 Mlig455_044646

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_044646 {REF} {Length: 383} {RNA1310_116667}
34. MligTC455_37112 144 3 Mlig455_011711

Neo: -

Age: -

 NEUROG1 0.965 - - - - 0.965 - Mlig455_011711 {REF} {Length: 2595} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=56.3]} {Human: ENSG00000181965, NEUROG1, neurogenin 1, [RH, Score=82.8, Expect=5e-19]; ENSG00000178403, NEUROG2, neurogenin 2, [RH, Score=79.7, Expect=1e-17]} {Mouse: ENSMUSG00000048904, Neurog1, neurogenin 1, [RH, Score=82.0, Expect=7e-19]; ENSMUSG00000027967, Neurog2, neurogenin 2, [RH, Score=80.1, Expect=6e-18]} {Dmel: FBgn0015550, tap, target of Poxn, [RH, Score=85.5, Expect=2e-19]} {Celegans: WBGene00003595, ngn-1, NeuroGeNin, [RH, Score=70.1, Expect=5e-15]} {Smed: dd_Smed_v6_21717_0_1, dd_Smed_v6_21717_0_1, [Score=68.2, Expect=3e-14]} {RNA1509_25288} {RNA1310_19679} {RNA815_8549.1}
35. MligTC455_22965 433 9.03 Mlig455_019042

Neo: -

Age: Down-Down-Up

 0.964 - - - 0.964 - - Mlig455_019042 {REF} {Length: 1514} {Pfam: Sleepless protein [PF17064.7, score=26.9]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [RH, Score=69.3, Expect=1e-15]} {RNA1509_27313, RNA1509_54222} {RNA1310_27569.1, RNA1509_54222} {RNA1509_54222, RNA815_11340}
36. MligTC455_40018 295 6.15 Mlig455_037646, Mlig455_069914

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.048

Region-enriched R8: 4.445/0.00001
Region-enriched R7: 3.788/0.00007

 AC243734.1, CHRNA2 0.964 - - - - 0.964 -

Mlig455_037646 {REF} {Length: 2101} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=46.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=27.0]} {Human: ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=68.9, Expect=6e-12]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=65.5, Expect=8e-11]} {Mouse: ENSMUSG00000035594, Chrna5, cholinergic receptor, nicotinic, alpha polypeptide 5, [Score=75.5, Expect=3e-14]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=73.2, Expect=2e-13]} {Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=82.8, Expect=9e-17]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=71.2, Expect=4e-13]} {Smed: dd_Smed_v6_8486_0_1, dd_Smed_v6_8486_0_1, [Score=78.2, Expect=2e-15]} {RNA1509_50033} {RNA1310_22440} {RNA815_15508}

Mlig455_069914 {REF} {Length: 3748} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=68.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=60.3]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=108, Expect=5e-25]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=108, Expect=9e-25]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=108, Expect=5e-25]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=107, Expect=1e-24]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=99.4, Expect=5e-22]} {Celegans: WBGene00000951, deg-3, Acetylcholine receptor subunit alpha-type deg-3, [Score=94.0, Expect=3e-20]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=113, Expect=7e-27]} {RNA1509_50033} {RNA1310_16096, RNA1509_50033} {RNA1509_50033, RNA815_15508}
37. MligTC455_54350 200 4.17 Mlig455_008866

Neo: -

Age: -

 PLAC8 0.962 - - - - - 0.962 Mlig455_008866 {REF} {Length: 1137} {Pfam: PLAC8 family [PF04749.19, score=73.9]} {Human: ENSG00000145287, PLAC8, placenta specific 8, [Score=53.1, Expect=7e-10]} {Smed: dd_Smed_v6_477_0_1, dd_Smed_v6_477_0_1, [RH, Score=127, Expect=2e-39]} {RNA1509_49668} {RNA1310_34433, RNA1509_49668} {RNA1509_49668, RNA815_23736}
38. MligTC455_10525 7 0.14 Mlig455_036520, Mlig455_069131

Neo: -

Age: -

 0.96 - - - - 0.960 -

Mlig455_036520 {REF} {Length: 362} {RNA1310_42261}

Mlig455_069131 {REF} {Length: 359} {RNA1310_42261}
39. MligTC455_13770 27 0.56 Mlig455_033395

Neo: -

Age: -

 HYOU1 0.96 - - - - 0.960 - Mlig455_033395 {REF} {Length: 4373} {Pfam: Hsp70 protein [PF00012.22, score=125.6]} {Human: ENSG00000280682, HYOU1, hypoxia up-regulated 1, [Score=207, Expect=2e-55]; ENSG00000149428, HYOU1, hypoxia up-regulated 1, [Score=207, Expect=2e-55]} {Mouse: ENSMUSG00000032115, Hyou1, hypoxia up-regulated 1, [Score=214, Expect=7e-58]} {Dmel: FBgn0023529, CG2918, [Score=213, Expect=8e-58]} {Celegans: WBGene00020781, T24H7.2, [Score=174, Expect=4e-45]} {Smed: dd_Smed_v6_2324_0_1, dd_Smed_v6_2324_0_1, [Score=213, Expect=7e-58]} {RNA1509_59725} {RNA1310_10861.1} {RNA815_31861.2}
40. MligTC455_18202 43 0.9 Mlig455_033558

Neo: -

Age: Up-Down-Down

 NPY1R 0.96 - - - - 0.960 - Mlig455_033558 {REF} {Length: 1975} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=98.1]} {Human: ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=72.4, Expect=3e-13]} {Mouse: ENSMUSG00000020090, Npffr1, neuropeptide FF receptor 1, [Score=69.3, Expect=2e-12]; ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=67.8, Expect=8e-12]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=82.0, Expect=2e-16]} {Celegans: WBGene00018067, npr-7, NeuroPeptide Receptor family, [Score=73.6, Expect=6e-14]} {Smed: dd_Smed_v6_29182_0_1, dd_Smed_v6_29182_0_1, [Score=80.1, Expect=2e-16]} {RNA1310_56954} {RNA815_50324}
41. MligTC455_24941 188 3.92 Mlig455_011277

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_011277 {REF} {Length: 236} {NoTransDecoderORF} {RNA1509_25592}
42. MligTC455_34279 55 1.15 Mlig455_056988

Neo: -

Age: -

 ZBTB16 0.958 - - - - 0.958 - Mlig455_056988 {REF} {Length: 3794} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=57.5]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.3]} {Human: ENSG00000109906, ZBTB16, zinc finger and BTB domain containing 16, [Score=52.8, Expect=2e-06]; ENSG00000084093, REST, RE1 silencing transcription factor, [Score=52.0, Expect=5e-06]} {Mouse: ENSMUSG00000026135, Zfp142, zinc finger protein 142, [Score=62.4, Expect=3e-09]} {Dmel: FBgn0262160, CG9932, [RH, Score=66.6, Expect=9e-11]} {Celegans: WBGene00001824, hbl-1, Hunchback-like protein, [Score=50.4, Expect=6e-06]} {Smed: dd_Smed_v6_36433_0_1, dd_Smed_v6_36433_0_1, [Score=176, Expect=9e-48]} {RNA1509_19024} {RNA1310_45424} {RNA815_39699}
43. MligTC455_44051 392 8.18 Mlig455_008770, Mlig455_008804

Neo: -

Age: -

Regeneration-downregulated BL: -5.343

Regeneration-depleted BL: -5.343

 IPMK 0.957 - - - - - 0.957

Mlig455_008770 {REF} {Length: 3071} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=104.2]} {Human: ENSG00000151151, IPMK, inositol polyphosphate multikinase, [Score=112, Expect=8e-27]} {Mouse: ENSMUSG00000060733, Ipmk, inositol polyphosphate multikinase, [Score=106, Expect=4e-25]} {Dmel: FBgn0031267, Ipk2, [Score=111, Expect=1e-27]} {Celegans: WBGene00014081, impk-1, Kinase, [Score=71.2, Expect=1e-13]} {Smed: dd_Smed_v6_3701_0_1, dd_Smed_v6_3701_0_1, [Score=150, Expect=3e-42]} {RNA1509_8202} {RNA1310_21614.2} {RNA815_34405}

Mlig455_008804 {REF} {Length: 2051} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=103.9]} {Human: ENSG00000151151, IPMK, inositol polyphosphate multikinase, [Score=112, Expect=4e-27]} {Mouse: ENSMUSG00000060733, Ipmk, inositol polyphosphate multikinase, [Score=107, Expect=1e-25]} {Dmel: FBgn0031267, Ipk2, [Score=113, Expect=2e-28]} {Celegans: WBGene00014081, impk-1, Kinase, [Score=71.2, Expect=9e-14]} {Smed: dd_Smed_v6_3701_0_1, dd_Smed_v6_3701_0_1, [Score=150, Expect=2e-42]} {RNA1509_8202} {RNA1310_21614.2} {RNA815_34405}
44. MligTC455_22054 7 0.14 Mlig455_019642

Neo: -

Age: -

 IGFN1 0.956 - - - - 0.956 - Mlig455_019642 {REF} {Length: 1018} {Human: ENSG00000163395, IGFN1, immunoglobulin-like and fibronectin type III domain containing 1, [Score=50.1, Expect=1e-07]} {RNA1509_39632} {RNA1310_35459.1} {RNA815_40343}
45. MligTC455_18456 1096 22.84 Mlig455_025389

Neo: -

Age: Down-Down-Up

Region-enriched R6: 6.958/0.00000
Region-enriched R2: 6.228/0.00011

 0.955 - - - - 0.955 - Mlig455_025389 {REF} {Length: 781} {RNA1509_31308, RNA1509_36358, RNA1509_37939} {RNA1310_53601, RNA1509_31308, RNA1509_36358, RNA1509_37939} {RNA1509_31308, RNA1509_36358, RNA1509_37939, RNA815_21102}
46. MligTC455_16817 24 0.49 Mlig455_005563

Neo: -

Age: Down-Up-Down

 TNR 0.954 - - - - 0.954 - Mlig455_005563 {REF} {Length: 1503} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=140.4]} {Human: ENSG00000116147, TNR, tenascin R, [Score=111, Expect=7e-27]; ENSG00000085265, FCN1, ficolin 1, [Score=107, Expect=1e-26]; ENSG00000142748, FCN3, ficolin 3, [Score=106, Expect=2e-26]} {Mouse: ENSMUSG00000015829, Tnr, tenascin R, [Score=113, Expect=1e-27]; ENSMUSG00000026725, Tnn, tenascin N, [Score=112, Expect=3e-27]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=112, Expect=1e-28]} {Dmel: FBgn0034160, CG5550, [Score=80.9, Expect=1e-17]} {Celegans: WBGene00020516, T15B7.1, [Score=55.5, Expect=1e-08]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=84.3, Expect=4e-18]} {RNA1310_33047} {RNA815_49193}
47. MligTC455_20518 46 0.97 Mlig455_061260

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_061260 {REF} {Length: 2941} {tRNA: Ala(CGC), score=68.6} {RNA1509_34079} {RNA1310_46597} {RNA815_18160}
48. MligTC455_22689 26 0.54 Mlig455_050479

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_050479 {REF} {Length: 4332} {RNA1310_123601} {RNA815_61258}
49. MligTC455_35508 4 0.08 Mlig455_063686

Neo: -

Age: -

 HRH2 0.953 - - - - 0.953 - Mlig455_063686 {REF} {Length: 884} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=70.8]} {Human: ENSG00000113749, HRH2, histamine receptor H2, [Score=67.4, Expect=5e-12]} {Mouse: ENSMUSG00000034987, Hrh2, histamine receptor H2, [Score=62.4, Expect=1e-10]; ENSMUSG00000037424, Taar9, trace amine-associated receptor 9, [Score=62.0, Expect=2e-10]} {Smed: dd_Smed_v6_15036_0_1, dd_Smed_v6_15036_0_1, [Score=50.1, Expect=6e-07]}
50. MligTC455_26508 9 0.19 Mlig455_004141, Mlig455_006847, Mlig455_042467, Mlig455_045362, Mlig455_055144, Mlig455_056120

Neo: Germline

Age: logFC(26M/2M)=-0.588

 CELSR2, RTL1 0.952 - - - - 0.952 -

Mlig455_004141 {REF} {Length: 4731} {Pfam: Cadherin domain [PF00028.19, score=27.7]} {Human: ENSG00000143126, CELSR2, cadherin EGF LAG seven-pass G-type receptor 2, [Score=63.9, Expect=6e-11]; ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=61.2, Expect=5e-10]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=61.2, Expect=5e-10]} {Mouse: ENSMUSG00000068740, Celsr2, cadherin, EGF LAG seven-pass G-type receptor 2, [Score=63.9, Expect=3e-11]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=61.6, Expect=2e-10]} {Dmel: FBgn0024836, stan, starry night, [Score=59.7, Expect=6e-10]} {Smed: dd_Smed_v6_15643_0_1, dd_Smed_v6_15643_0_1, [Score=53.9, Expect=3e-08]} {RNA1509_50918} {RNA1310_2131.1} {RNA815_11127}

Mlig455_006847 {REF} {Length: 4706} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.8]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.3]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=93.2, Expect=2e-18]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=232, Expect=6e-66]} {RNA1509_50918} {RNA1310_2131.1} {RNA815_11127}

Mlig455_042467 {REF} {Length: 3160} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.6]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=80.1, Expect=1e-14]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=179, Expect=4e-48]} {RNA1509_50918} {RNA1310_2131.1} {RNA815_11127}

Mlig455_045362 {REF} {Length: 4361} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=58.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=19.9]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=157, Expect=5e-40]} {RNA1509_50918} {RNA1310_2131.1} {RNA815_11127}

Mlig455_055144 {REF} {Length: 4897} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.8]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=56.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=92.0, Expect=3e-18]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=227, Expect=3e-64]} {RNA1509_50918} {RNA1310_2131.1} {RNA815_11127}

Mlig455_056120 {REF} {Length: 321} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.6]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=68.6, Expect=8e-15]} {RNA1509_50918} {RNA1310_2131.1}
51. MligTC455_44270 91 1.9 Mlig455_009393, Mlig455_036926

Neo: -

Age: -

 EXOC1 0.952 - - - 0.952 - -

Mlig455_009393 {REF} {Length: 4392} {Pfam: Exocyst complex component Sec3 [PF09763.11, score=282.1]; Exocyst complex component SEC3 N-terminal PIP2 binding PH [PF15277.8, score=34.2]} {Human: ENSG00000090989, EXOC1, exocyst complex component 1, [Score=308, Expect=3e-91]} {Mouse: ENSMUSG00000036435, Exoc1, exocyst complex component 1, [Score=303, Expect=2e-89]} {Dmel: FBgn0266669, Sec3, Secretory 3, [Score=306, Expect=1e-90]} {Celegans: WBGene00018703, sec-3, Exocyst complex component 1, [Score=239, Expect=7e-67]} {Smed: dd_Smed_v6_6427_0_4, dd_Smed_v6_6427_0_4, [Score=290, Expect=3e-85]} {RNA1509_5055} {RNA1310_14195} {RNA815_1315}

Mlig455_036926 {REF} {Length: 4354} {TRANSSPLICED} {Pfam: Exocyst complex component Sec3 [PF09763.11, score=332.3]; Exocyst complex component SEC3 N-terminal PIP2 binding PH [PF15277.8, score=35.6]} {Human: ENSG00000090989, EXOC1, exocyst complex component 1, [RH, Score=336, Expect=9e-101]} {Mouse: ENSMUSG00000036435, Exoc1, exocyst complex component 1, [RH, Score=330, Expect=1e-98]} {Dmel: FBgn0266669, Sec3, Secretory 3, [RH, Score=341, Expect=4e-103]} {Celegans: WBGene00018703, sec-3, Exocyst complex component 1, [RH, Score=251, Expect=1e-70]} {Smed: dd_Smed_v6_6427_0_4, dd_Smed_v6_6427_0_4, [RH, Score=315, Expect=1e-93]} {RNA1509_5055, RNA1509_54407} {RNA1310_4565, RNA1509_5055, RNA1509_54407} {RNA1509_5055, RNA1509_54407, RNA815_1315}
52. MligTC455_46110 114 2.38 Mlig455_007399, Mlig455_007500

Neo: -

Age: -

 0.952 - - 0.952 - - -

Mlig455_007399 {REF} {Length: 2703} {RNA1509_46950} {RNA1310_23153} {RNA815_19248}

Mlig455_007500 {REF} {Length: 2693} {RNA1509_46950} {RNA1310_23153} {RNA815_19248}
53. MligTC455_22869 61 1.28 Mlig455_039906, Mlig455_039942

Neo: -

Age: -

Region-enriched R2: 3.948/0.03818

 HCRTR1 0.951 - - - - 0.951 -

Mlig455_039906 {REF} {Length: 2770} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=99.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=18.8]} {Human: ENSG00000121764, HCRTR1, hypocretin receptor 1, [Score=78.6, Expect=4e-15]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=82.4, Expect=2e-16]} {Dmel: FBgn0025595, AkhR, Adipokinetic hormone receptor, [Score=54.7, Expect=9e-08]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_16129_0_1, dd_Smed_v6_16129_0_1, [RH, Score=215, Expect=2e-65]} {RNA1310_40963.1}

Mlig455_039942 {REF} {Length: 1828} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=99.9]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=18.8]} {Human: ENSG00000121764, HCRTR1, hypocretin receptor 1, [Score=78.2, Expect=6e-15]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=83.2, Expect=9e-17]} {Dmel: FBgn0025595, AkhR, Adipokinetic hormone receptor, [Score=54.7, Expect=9e-08]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=62.0, Expect=3e-10]} {Smed: dd_Smed_v6_16129_0_1, dd_Smed_v6_16129_0_1, [RH, Score=215, Expect=1e-65]} {RNA1310_40963.1}
54. MligTC455_09385 5 0.11 Mlig455_022564

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_022564 {REF} {Length: 1192} {NoTransDecoderORF} {RNA1509_35668} {RNA1310_23997.1} {RNA815_18824.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA