Data search


search
Exact
Search

Results for MligTC455_38357

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38357 22 0.46 Mlig455_053059

Neo: -

Age: -

Mlig455_053059 {REF} {Length: 2077} {RNA1509_42586} {RNA1310_61726} {RNA815_15862}

Cumulative graph for MligTC455_38357

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.972 0.766 0.99990 1.00000
RegionR2 4.154 0.766 0.12843 0.44458
RegionR3 1.666 0.766 0.28207 0.82544
RegionR4 -2.629 0.766 0.99390 1.00000
RegionR5 -0.687 0.766 0.84352 1.00000
RegionR6 2.396 0.766 0.14120 0.67391
RegionR7 -2.539 0.766 0.99985 1.00000
RegionR8 2.612 0.766 0.36798 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.386 0.766 1.00000 1.00000
RegenerationR2 -1.08 0.766 0.48021 0.86357
RegenerationR3 -0.107 0.766 0.97058 1.00000
RegenerationR4 2.197 0.766 0.43309 0.83223
RegenerationR5 2.041 0.766 0.31409 0.73913
RegenerationR6 -1.97 0.766 0.34058 0.68636
RegenerationBL -1.208 0.766 0.99983 1.00000
RegenerationTP -0.523 0.766 1.00000 1.00000


Genes with expression patterns similar to MligTC455_38357

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38357 22 0.46 Mlig455_053059

Neo: -

Age: -

2 - 1.000 - - - 1.000 Mlig455_053059 {REF} {Length: 2077} {RNA1509_42586} {RNA1310_61726} {RNA815_15862}
2. MligTC455_39859 143 2.97 Mlig455_052229

Neo: -

Age: -

NECAB1 0.972 - 0.972 - - - - Mlig455_052229 {REF} {Length: 1726} {Pfam: EF-hand domain [PF13405.8, score=34.7]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.6]; EF-hand domain pair [PF13833.8, score=27.4]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=25.5]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=187, Expect=1e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=182, Expect=1e-53]} {RNA1310_5770} {RNA815_27367}
3. MligTC455_39723 249 5.18 Mlig455_022693, Mlig455_022705

Neo: -

Age: -

Region-enriched R2: 3.177/0.00982

0.962 - 0.962 - - - -

Mlig455_022693 {REF} {Length: 1190} {TRANSSPLICED} {RNA1310_27415} {RNA815_16060}

Mlig455_022705 {REF} {Length: 1526} {TRANSSPLICED} {RNA1310_27415} {RNA815_16060}
4. MligTC455_12978 63 1.31 Mlig455_023948

Neo: -

Age: -

0.95 - - - - - 0.950 Mlig455_023948 {REF} {Length: 2929} {RNA1310_80095.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA