TomoSeq data search

Data search

Results for MligTC455_38444

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_38444	737	15.35	Mlig455_042560	Neo: - Age: -	GLIPR1L1	Mlig455_042560 {REF} {Length: 1717} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=67.3]} {Human: ENSG00000173401, GLIPR1L1, GLIPR1 like 1, [Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000020213, Glipr1l1, GLI pathogenesis-related 1 like 1, [Score=82.0, Expect=2e-17]} {Celegans: WBGene00003055, lon-1, LONg, [Score=72.4, Expect=6e-14]} {Smed: dd_Smed_v6_2021_0_1, dd_Smed_v6_2021_0_1, [Score=112, Expect=1e-26]} {RNA1509_15273} {RNA1310_22916, RNA1509_15273} {RNA1509_15273, RNA815_9431}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_38444

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.294	4.304	0.84660	1.00000
RegionR2	-0.501	4.304	0.40404	0.79773
RegionR3	0.032	4.304	0.94782	1.00000
RegionR4	1.486	4.304	0.01320	0.07495
RegionR5	-0.171	4.304	0.73199	1.00000
RegionR6	-0.179	4.304	0.72607	1.00000
RegionR7	0.667	4.304	0.23643	0.86046
RegionR8	-1.04	4.304	0.25748	0.87861

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.453	4.304	0.79827	1.00000
RegenerationR2	-0.056	4.304	0.91097	1.00000
RegenerationR3	-0.085	4.304	0.87052	1.00000
RegenerationR4	-0.633	4.304	0.26654	0.71380
RegenerationR5	-0.115	4.304	0.82825	0.99716
RegenerationR6	-0.425	4.304	0.45046	0.77103
RegenerationBL	-0.989	4.304	0.14834	0.46016
RegenerationTP	-0.428	4.304	0.56550	0.94178

Genes with expression patterns similar to MligTC455_38444

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38444	737	15.35	Mlig455_042560	Neo: - Age: -	GLIPR1L1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_042560 {REF} {Length: 1717} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=67.3]} {Human: ENSG00000173401, GLIPR1L1, GLIPR1 like 1, [Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000020213, Glipr1l1, GLI pathogenesis-related 1 like 1, [Score=82.0, Expect=2e-17]} {Celegans: WBGene00003055, lon-1, LONg, [Score=72.4, Expect=6e-14]} {Smed: dd_Smed_v6_2021_0_1, dd_Smed_v6_2021_0_1, [Score=112, Expect=1e-26]} {RNA1509_15273} {RNA1310_22916, RNA1509_15273} {RNA1509_15273, RNA815_9431}
2.	MligTC455_51595	935	19.47	Mlig455_019402, Mlig455_059070	Neo: - Age: -	LMO7	0.951	-	-	-	-	-	0.951	Mlig455_019402 {REF} {Length: 5766} {Pfam: LIM domain [PF00412.24, score=31.6]; Calponin homology (CH) domain [PF00307.33, score=30.6]; CAMSAP CH domain [PF11971.10, score=27.2]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=93.2, Expect=2e-18]; ENSG00000064042, LIMCH1, LIM and calponin homology domains 1, [RH, Score=91.3, Expect=5e-18]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=7e-19]; ENSMUSG00000037736, Limch1, LIM and calponin homology domains 1, [RH, Score=92.4, Expect=1e-18]} {Dmel: FBgn0263346, CG43427, [Score=123, Expect=4e-28]} {Celegans: WBGene00017904, lim-8, LIM domain family, [Score=108, Expect=5e-24]} {Smed: dd_Smed_v6_10011_0_2, dd_Smed_v6_10011_0_2, [Score=94.7, Expect=2e-19]} {RNA1509_49428} {RNA1310_1073} {RNA815_7834.1} Mlig455_059070 {REF} {Length: 5441} {Pfam: LIM domain [PF00412.24, score=31.6]; Calponin homology (CH) domain [PF00307.33, score=29.7]; CAMSAP CH domain [PF11971.10, score=27.1]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=93.2, Expect=1e-18]; ENSG00000064042, LIMCH1, LIM and calponin homology domains 1, [RH, Score=91.3, Expect=4e-18]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=6e-19]; ENSMUSG00000037736, Limch1, LIM and calponin homology domains 1, [RH, Score=92.8, Expect=9e-19]} {Dmel: FBgn0263346, CG43427, [Score=123, Expect=3e-28]} {Celegans: WBGene00017904, lim-8, LIM domain family, [Score=109, Expect=4e-24]} {Smed: dd_Smed_v6_10011_0_1, dd_Smed_v6_10011_0_1, [Score=92.4, Expect=8e-19]} {RNA1509_49428} {RNA1310_1073} {RNA815_7834.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_38444

737

15.35

Mlig455_042560

Neo: -

Age: -

GLIPR1L1

1.000

MligTC455_51595

935

19.47

Mlig455_019402, Mlig455_059070

Neo: -

Age: -

LMO7

0.951

Mlig455_019402 {REF} {Length: 5766} {Pfam: LIM domain [PF00412.24, score=31.6]; Calponin homology (CH) domain [PF00307.33, score=30.6]; CAMSAP CH domain [PF11971.10, score=27.2]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=93.2, Expect=2e-18]; ENSG00000064042, LIMCH1, LIM and calponin homology domains 1, [RH, Score=91.3, Expect=5e-18]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=7e-19]; ENSMUSG00000037736, Limch1, LIM and calponin homology domains 1, [RH, Score=92.4, Expect=1e-18]} {Dmel: FBgn0263346, CG43427, [Score=123, Expect=4e-28]} {Celegans: WBGene00017904, lim-8, LIM domain family, [Score=108, Expect=5e-24]} {Smed: dd_Smed_v6_10011_0_2, dd_Smed_v6_10011_0_2, [Score=94.7, Expect=2e-19]} {RNA1509_49428} {RNA1310_1073} {RNA815_7834.1}

Mlig455_059070 {REF} {Length: 5441} {Pfam: LIM domain [PF00412.24, score=31.6]; Calponin homology (CH) domain [PF00307.33, score=29.7]; CAMSAP CH domain [PF11971.10, score=27.1]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=93.2, Expect=1e-18]; ENSG00000064042, LIMCH1, LIM and calponin homology domains 1, [RH, Score=91.3, Expect=4e-18]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=6e-19]; ENSMUSG00000037736, Limch1, LIM and calponin homology domains 1, [RH, Score=92.8, Expect=9e-19]} {Dmel: FBgn0263346, CG43427, [Score=123, Expect=3e-28]} {Celegans: WBGene00017904, lim-8, LIM domain family, [Score=109, Expect=4e-24]} {Smed: dd_Smed_v6_10011_0_1, dd_Smed_v6_10011_0_1, [Score=92.4, Expect=8e-19]} {RNA1509_49428} {RNA1310_1073} {RNA815_7834.1}