TomoSeq data search

Data search

Results for MligTC455_51595

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_51595	935	19.47	Mlig455_019402, Mlig455_059070	Neo: - Age: -	LMO7	Mlig455_019402 {REF} {Length: 5766} {Pfam: LIM domain [PF00412.24, score=31.6]; Calponin homology (CH) domain [PF00307.33, score=30.6]; CAMSAP CH domain [PF11971.10, score=27.2]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=93.2, Expect=2e-18]; ENSG00000064042, LIMCH1, LIM and calponin homology domains 1, [RH, Score=91.3, Expect=5e-18]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=7e-19]; ENSMUSG00000037736, Limch1, LIM and calponin homology domains 1, [RH, Score=92.4, Expect=1e-18]} {Dmel: FBgn0263346, CG43427, [Score=123, Expect=4e-28]} {Celegans: WBGene00017904, lim-8, LIM domain family, [Score=108, Expect=5e-24]} {Smed: dd_Smed_v6_10011_0_2, dd_Smed_v6_10011_0_2, [Score=94.7, Expect=2e-19]} {RNA1509_49428} {RNA1310_1073} {RNA815_7834.1} Mlig455_059070 {REF} {Length: 5441} {Pfam: LIM domain [PF00412.24, score=31.6]; Calponin homology (CH) domain [PF00307.33, score=29.7]; CAMSAP CH domain [PF11971.10, score=27.1]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=93.2, Expect=1e-18]; ENSG00000064042, LIMCH1, LIM and calponin homology domains 1, [RH, Score=91.3, Expect=4e-18]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=6e-19]; ENSMUSG00000037736, Limch1, LIM and calponin homology domains 1, [RH, Score=92.8, Expect=9e-19]} {Dmel: FBgn0263346, CG43427, [Score=123, Expect=3e-28]} {Celegans: WBGene00017904, lim-8, LIM domain family, [Score=109, Expect=4e-24]} {Smed: dd_Smed_v6_10011_0_1, dd_Smed_v6_10011_0_1, [Score=92.4, Expect=8e-19]} {RNA1509_49428} {RNA1310_1073} {RNA815_7834.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51595

935

19.47

Mlig455_019402, Mlig455_059070

Neo: -

Age: -

LMO7

Mlig455_019402 {REF} {Length: 5766} {Pfam: LIM domain [PF00412.24, score=31.6]; Calponin homology (CH) domain [PF00307.33, score=30.6]; CAMSAP CH domain [PF11971.10, score=27.2]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=93.2, Expect=2e-18]; ENSG00000064042, LIMCH1, LIM and calponin homology domains 1, [RH, Score=91.3, Expect=5e-18]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=7e-19]; ENSMUSG00000037736, Limch1, LIM and calponin homology domains 1, [RH, Score=92.4, Expect=1e-18]} {Dmel: FBgn0263346, CG43427, [Score=123, Expect=4e-28]} {Celegans: WBGene00017904, lim-8, LIM domain family, [Score=108, Expect=5e-24]} {Smed: dd_Smed_v6_10011_0_2, dd_Smed_v6_10011_0_2, [Score=94.7, Expect=2e-19]} {RNA1509_49428} {RNA1310_1073} {RNA815_7834.1}

Mlig455_059070 {REF} {Length: 5441} {Pfam: LIM domain [PF00412.24, score=31.6]; Calponin homology (CH) domain [PF00307.33, score=29.7]; CAMSAP CH domain [PF11971.10, score=27.1]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=93.2, Expect=1e-18]; ENSG00000064042, LIMCH1, LIM and calponin homology domains 1, [RH, Score=91.3, Expect=4e-18]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=6e-19]; ENSMUSG00000037736, Limch1, LIM and calponin homology domains 1, [RH, Score=92.8, Expect=9e-19]} {Dmel: FBgn0263346, CG43427, [Score=123, Expect=3e-28]} {Celegans: WBGene00017904, lim-8, LIM domain family, [Score=109, Expect=4e-24]} {Smed: dd_Smed_v6_10011_0_1, dd_Smed_v6_10011_0_1, [Score=92.4, Expect=8e-19]} {RNA1509_49428} {RNA1310_1073} {RNA815_7834.1}

Cumulative graph for MligTC455_51595

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.239	4.593	0.83893	1.00000
RegionR2	0.278	4.593	0.58219	0.93801
RegionR3	0.636	4.593	0.10734	0.57102
RegionR4	0.285	4.593	0.55568	0.87578
RegionR5	0.107	4.593	0.78006	1.00000
RegionR6	0.023	4.593	0.95705	1.00000
RegionR7	-0.509	4.593	0.38176	1.00000
RegionR8	-0.58	4.593	0.45360	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.295	4.593	0.84029	1.00000
RegenerationR2	0.355	4.593	0.40197	0.81557
RegenerationR3	0.123	4.593	0.78915	0.97868
RegenerationR4	0.735	4.593	0.13431	0.55295
RegenerationR5	0.82	4.593	0.06844	0.41125
RegenerationR6	0.383	4.593	0.41731	0.74916
RegenerationBL	0.895	4.593	0.08575	0.34315
RegenerationTP	0.947	4.593	0.12157	0.53050

Genes with expression patterns similar to MligTC455_51595

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51595	935	19.47	Mlig455_019402, Mlig455_059070	Neo: - Age: -	LMO7	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_019402 {REF} {Length: 5766} {Pfam: LIM domain [PF00412.24, score=31.6]; Calponin homology (CH) domain [PF00307.33, score=30.6]; CAMSAP CH domain [PF11971.10, score=27.2]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=93.2, Expect=2e-18]; ENSG00000064042, LIMCH1, LIM and calponin homology domains 1, [RH, Score=91.3, Expect=5e-18]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=7e-19]; ENSMUSG00000037736, Limch1, LIM and calponin homology domains 1, [RH, Score=92.4, Expect=1e-18]} {Dmel: FBgn0263346, CG43427, [Score=123, Expect=4e-28]} {Celegans: WBGene00017904, lim-8, LIM domain family, [Score=108, Expect=5e-24]} {Smed: dd_Smed_v6_10011_0_2, dd_Smed_v6_10011_0_2, [Score=94.7, Expect=2e-19]} {RNA1509_49428} {RNA1310_1073} {RNA815_7834.1} Mlig455_059070 {REF} {Length: 5441} {Pfam: LIM domain [PF00412.24, score=31.6]; Calponin homology (CH) domain [PF00307.33, score=29.7]; CAMSAP CH domain [PF11971.10, score=27.1]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=93.2, Expect=1e-18]; ENSG00000064042, LIMCH1, LIM and calponin homology domains 1, [RH, Score=91.3, Expect=4e-18]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=6e-19]; ENSMUSG00000037736, Limch1, LIM and calponin homology domains 1, [RH, Score=92.8, Expect=9e-19]} {Dmel: FBgn0263346, CG43427, [Score=123, Expect=3e-28]} {Celegans: WBGene00017904, lim-8, LIM domain family, [Score=109, Expect=4e-24]} {Smed: dd_Smed_v6_10011_0_1, dd_Smed_v6_10011_0_1, [Score=92.4, Expect=8e-19]} {RNA1509_49428} {RNA1310_1073} {RNA815_7834.1}
2.	MligTC455_33864	926	19.29	Mlig455_064384	Neo: - Age: -		0.968	-	-	-	-	-	0.968	Mlig455_064384 {REF} {Length: 1471} {NoTransDecoderORF} {RNA1509_32249} {RNA1310_11694.1} {RNA815_10459}
3.	MligTC455_33863	1988	41.42	Mlig455_025793, Mlig455_064361	Neo: - Age: -	BTRC	0.952	-	-	-	-	-	0.952	Mlig455_025793 {REF} {Length: 5618} {Pfam: WD domain, G-beta repeat [PF00400.34, score=130.3]; D domain of beta-TrCP [PF12125.10, score=62.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=38.2]; F-box-like [PF12937.9, score=37.5]; Nucleoporin Nup120/160 [PF11715.10, score=26.5]; WD40-like domain [PF17005.7, score=22.7]} {Human: ENSG00000166167, BTRC, beta-transducin repeat containing E3 ubiquitin protein ligase, [RH, Score=735, Expect=0.0]; ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [RH, Score=714, Expect=0.0]} {Mouse: ENSMUSG00000025217, Btrc, beta-transducin repeat containing protein, [RH, Score=733, Expect=0.0]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [RH, Score=716, Expect=0.0]} {Dmel: FBgn0283468, slmb, supernumerary limbs, [RH, Score=742, Expect=0.0]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [RH, Score=632, Expect=0.0]} {Smed: dd_Smed_v6_3757_0_1, dd_Smed_v6_3757_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_11648, RNA1509_26322, RNA1509_3057, RNA1509_42851, RNA1509_48589} {RNA1310_10361.1, RNA1509_11648, RNA1509_26322, RNA1509_42851, RNA1509_48589} {RNA1509_11648, RNA1509_26322, RNA1509_42851, RNA1509_48589, RNA815_3571} Mlig455_064361 {REF} {Length: 5860} {Pfam: WD domain, G-beta repeat [PF00400.34, score=130.3]; D domain of beta-TrCP [PF12125.10, score=62.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=38.2]; F-box-like [PF12937.9, score=37.5]; Nucleoporin Nup120/160 [PF11715.10, score=26.5]; WD40-like domain [PF17005.7, score=22.7]} {Human: ENSG00000166167, BTRC, beta-transducin repeat containing E3 ubiquitin protein ligase, [RH, Score=735, Expect=0.0]; ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [RH, Score=715, Expect=0.0]} {Mouse: ENSMUSG00000025217, Btrc, beta-transducin repeat containing protein, [RH, Score=734, Expect=0.0]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [RH, Score=717, Expect=0.0]} {Dmel: FBgn0283468, slmb, supernumerary limbs, [RH, Score=743, Expect=0.0]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [RH, Score=632, Expect=0.0]} {Smed: dd_Smed_v6_3757_0_1, dd_Smed_v6_3757_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_14454, RNA1509_3057, RNA1509_32249} {RNA1310_10361.1, RNA1509_14454, RNA1509_3057, RNA1509_32249} {RNA1509_14454, RNA1509_3057, RNA1509_32249, RNA815_3571}
4.	MligTC455_38444	737	15.35	Mlig455_042560	Neo: - Age: -	GLIPR1L1	0.951	-	-	-	-	-	0.951	Mlig455_042560 {REF} {Length: 1717} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=67.3]} {Human: ENSG00000173401, GLIPR1L1, GLIPR1 like 1, [Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000020213, Glipr1l1, GLI pathogenesis-related 1 like 1, [Score=82.0, Expect=2e-17]} {Celegans: WBGene00003055, lon-1, LONg, [Score=72.4, Expect=6e-14]} {Smed: dd_Smed_v6_2021_0_1, dd_Smed_v6_2021_0_1, [Score=112, Expect=1e-26]} {RNA1509_15273} {RNA1310_22916, RNA1509_15273} {RNA1509_15273, RNA815_9431}