TomoSeq data search

Data search

Results for MligTC455_38492

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38492

259

5.40

Mlig455_063161

Age: -

Region-enriched R4: 6.942/0.00026
Region-enriched R5: 3.442/0.01341

Mlig455_063161 {REF} {Length: 585} {RNA1509_23906} {RNA1310_54544} {RNA815_25240}

Cumulative graph for MligTC455_38492

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.408	2.863	0.99963	1.00000
RegionR2	-4.138	2.863	0.99976	1.00000
RegionR3	-0.94	2.863	0.98443	1.00000
RegionR4	6.942	2.863	0.00001	0.00026
RegionR5	3.442	2.863	0.00141	0.01341
RegionR6	0.405	2.863	0.65636	1.00000
RegionR7	1.605	2.863	0.19057	0.79447
RegionR8	-4.908	2.863	0.18151	0.76687

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.67	2.863	0.78897	1.00000
RegenerationR2	0.111	2.863	0.91203	1.00000
RegenerationR3	0.137	2.863	0.94036	1.00000
RegenerationR4	-1.296	2.863	0.31979	0.75805
RegenerationR5	-0.039	2.863	0.92957	1.00000
RegenerationR6	-0.703	2.863	0.58568	0.86129
RegenerationBL	-0.536	2.863	0.88854	1.00000
RegenerationTP	1.051	2.863	0.62551	0.97476

Genes with expression patterns similar to MligTC455_38492

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38492	259	5.4	Mlig455_063161	Neo: Neoblast Age: - Region-enriched R4: 6.942/0.00026 Region-enriched R5: 3.442/0.01341		4	-	-	1.000	1.000	1.000	1.000	Mlig455_063161 {REF} {Length: 585} {RNA1509_23906} {RNA1310_54544} {RNA815_25240}
2.	MligTC455_18101	519	10.82	Mlig455_049090	Neo: - Age: -	RAB39A	2.509	-	-	0.980	0.702	-	0.827	Mlig455_049090 {REF} {Length: 3973} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=146.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=91.4]; ADP-ribosylation factor family [PF00025.23, score=41.0]; 50S ribosome-binding GTPase [PF01926.25, score=27.7]} {Human: ENSG00000179331, RAB39A, RAB39A, member RAS oncogene family, [Score=167, Expect=2e-51]; ENSG00000155961, RAB39B, RAB39B, member RAS oncogene family, [Score=165, Expect=1e-50]} {Mouse: ENSMUSG00000055069, Rab39, RAB39, member RAS oncogene family, [Score=166, Expect=4e-51]; ENSMUSG00000031202, Rab39b, RAB39B, member RAS oncogene family, [Score=165, Expect=1e-50]} {Dmel: FBgn0029959, Rab39, [Score=189, Expect=2e-60]} {Celegans: WBGene00004286, rab-39, RAB family, [Score=161, Expect=2e-49]} {Smed: dd_Smed_v6_3651_0_1, dd_Smed_v6_3651_0_1, [Score=191, Expect=2e-61]} {RNA1509_60116} {RNA1310_40488, RNA1509_60116} {RNA1509_60116, RNA815_35666}
3.	MligTC455_32077	240	4.99	Mlig455_032957	Neo: - Age: -		1.736	-	-	0.950	-	0.786	-	Mlig455_032957 {REF} {Length: 4172} {TRANSSPLICED} {RNA1509_19305, RNA1509_34564} {RNA1310_20429.1, RNA1509_19305, RNA1509_34564} {RNA1509_19305, RNA1509_34564, RNA815_7869}
4.	MligTC455_48893	851	17.72	Mlig455_008345	Neo: - Age: Down-Up-Down Regeneration-downregulated BL: -3.366 Regeneration-depleted BL: -3.366		1.724	-	-	0.950	0.774	-	-	Mlig455_008345 {REF} {Length: 572} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15367} {RNA1310_27333.1, RNA1509_15367} {RNA1509_15367, RNA815_31156}
5.	MligTC455_19263	844	17.58	Mlig455_008458	Neo: - Age: -	ERLEC1	1.72	-	-	0.965	0.755	-	-	Mlig455_008458 {REF} {Length: 2376} {TRANSSPLICED} {Pfam: Glucosidase II beta subunit-like protein [PF07915.15, score=84.2]; Glucosidase II beta subunit-like protein [PF13015.8, score=22.2]} {Human: ENSG00000068912, ERLEC1, endoplasmic reticulum lectin 1, [Score=211, Expect=3e-62]} {Mouse: ENSMUSG00000020311, Erlec1, endoplasmic reticulum lectin 1, [Score=158, Expect=8e-43]} {Dmel: FBgn0032398, CG6766, [RH, Score=198, Expect=2e-57]} {Celegans: WBGene00013667, Y105E8A.2, [Score=197, Expect=4e-57]} {Smed: dd_Smed_v6_5006_0_1, dd_Smed_v6_5006_0_1, [RH, Score=252, Expect=3e-78]} {RNA1509_5317} {RNA1310_30870, RNA1509_5317} {RNA1509_5317, RNA815_1385.1}
6.	MligTC455_42435	374	7.8	Mlig455_018657	Neo: - Age: - Region-enriched R5: 1.405/0.02263	VPS51	1.696	-	-	0.951	-	-	0.745	Mlig455_018657 {REF} {Length: 2993} {TRANSSPLICED} {Pfam: Vps51/Vps67 [PF08700.13, score=91.6]; Exocyst complex component Sec5 [PF15469.8, score=79.7]; Dor1-like family [PF04124.14, score=46.6]; COG (conserved oligomeric Golgi) complex component, COG2 [PF06148.13, score=41.3]; Golgi transport complex subunit 5 [PF10392.11, score=34.8]; Vacuolar-sorting protein 54, of GARP complex [PF10475.11, score=28.1]; Vps53-like, N-terminal [PF04100.14, score=20.9]} {Human: ENSG00000149823, VPS51, VPS51, GARP complex subunit, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000024797, Vps51, VPS51 GARP complex subunit, [RH, Score=544, Expect=0.0]; ENSMUSG00000024799, Tm7sf2, transmembrane 7 superfamily member 2, [RH, Score=544, Expect=0.0]} {Dmel: FBgn0034380, Vps51, Vacuolar protein sorting 51, [RH, Score=488, Expect=2e-162]} {Celegans: WBGene00015176, vps-51, Vacuolar protein sorting-associated protein 51 homolog, [RH, Score=253, Expect=9e-74]} {Smed: dd_Smed_v6_8916_0_2, dd_Smed_v6_8916_0_2, [RH, Score=477, Expect=2e-157]} {RNA1509_9394} {RNA1310_5753} {RNA815_5831}
7.	MligTC455_37043	353	7.35	Mlig455_069044	Neo: Int S/G2/M Age: -	RFC5	1.688	-	-	-	-	0.980	0.708	Mlig455_069044 {REF} {Length: 2372} {TRANSSPLICED} {Pfam: Replication factor C C-terminal domain [PF08542.13, score=59.1]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=57.0]; DNA polymerase III, delta subunit [PF13177.8, score=52.5]; Rad17 P-loop domain [PF03215.17, score=28.7]; AAA domain [PF13401.8, score=23.9]; AAA C-terminal domain [PF16193.7, score=23.4]; AAA ATPase domain [PF13191.8, score=21.9]; AAA domain [PF13173.8, score=19.4]; AAA domain [PF13604.8, score=18.9]} {Human: ENSG00000111445, RFC5, replication factor C subunit 5, [RH, Score=411, Expect=1e-143]} {Mouse: ENSMUSG00000029363, Rfc5, replication factor C (activator 1) 5, [RH, Score=413, Expect=8e-145]} {Dmel: FBgn0032244, RfC3, Replication factor C subunit 3, [RH, Score=379, Expect=1e-131]} {Celegans: WBGene00018409, F44B9.8, Probable replication factor C subunit 5, [RH, Score=327, Expect=1e-110]} {Smed: dd_Smed_v6_5504_0_1, dd_Smed_v6_5504_0_1, [RH, Score=359, Expect=6e-124]} {RNA1509_20013} {RNA1310_24005, RNA1509_20013} {RNA1509_20013, RNA815_8700}
8.	MligTC455_45380	7487	155.97	Mlig455_015245	Neo: - Age: -	ATP6V1G1	0.971	-	-	-	0.971	-	-	Mlig455_015245 {REF} {Length: 1046} {Pfam: Vacuolar (H+)-ATPase G subunit [PF03179.17, score=111.9]} {Human: ENSG00000136888, ATP6V1G1, ATPase H+ transporting V1 subunit G1, [RH, Score=116, Expect=2e-34]} {Mouse: ENSMUSG00000039105, Atp6v1g1, ATPase, H+ transporting, lysosomal V1 subunit G1, [RH, Score=114, Expect=5e-34]} {Dmel: FBgn0283536, Vha13, Vacuolar H[+] ATPase 13kD subunit, [RH, Score=102, Expect=2e-29]} {Celegans: WBGene00006919, vha-10, Probable V-type proton ATPase subunit G, [RH, Score=107, Expect=3e-31]} {Smed: dd_Smed_v6_545_0_1, dd_Smed_v6_545_0_1, [RH, Score=109, Expect=4e-32]} {RNA1509_1391, RNA1509_14863, RNA1509_31874, RNA1509_3790} {RNA1310_31179, RNA1509_1391, RNA1509_14863, RNA1509_31874, RNA1509_3790} {RNA1509_1391, RNA1509_14863, RNA1509_31874, RNA1509_3790, RNA815_13862.2}
9.	MligTC455_33867	340	7.08	Mlig455_005075	Neo: - Age: -	MED13	0.968	-	-	0.968	-	-	-	Mlig455_005075 {REF} {Length: 6887} {Pfam: Mediator complex subunit 13 C-terminal domain [PF06333.14, score=204.1]; Mediator complex subunit 13 N-terminal [PF11597.10, score=49.4]} {Human: ENSG00000108510, MED13, mediator complex subunit 13, [RH, Score=212, Expect=2e-54]; ENSG00000123066, MED13L, mediator complex subunit 13 like, [RH, Score=202, Expect=1e-51]} {Mouse: ENSMUSG00000034297, Med13, mediator complex subunit 13, [RH, Score=213, Expect=6e-55]} {Dmel: FBgn0003415, skd, skuld, [RH, Score=199, Expect=9e-51]} {Celegans: WBGene00002295, let-19, Mediator of RNA polymerase II transcription subunit 13, [RH, Score=145, Expect=2e-34]} {Smed: dd_Smed_v6_5628_0_1, dd_Smed_v6_5628_0_1, [RH, Score=176, Expect=4e-44]} {RNA1509_5621} {RNA1310_887} {RNA815_2444}
10.	MligTC455_32298	801	16.69	Mlig455_047662	Neo: - Age: -	LMAN2L	0.963	-	-	-	-	-	0.963	Mlig455_047662 {REF} {Length: 4017} {TRANSSPLICED} {Human: ENSG00000114988, LMAN2L, lectin, mannose binding 2 like, [Score=53.9, Expect=2e-09]} {Mouse: ENSMUSG00000001143, Lman2l, lectin, mannose-binding 2-like, [Score=55.1, Expect=6e-10]} {Dmel: FBgn0039160, CG5510, [Score=42.4, Expect=1e-05]} {Celegans: WBGene00002071, ile-2, Intracellular LEctin, [Score=45.1, Expect=1e-06]} {Smed: dd_Smed_v6_2066_0_1, dd_Smed_v6_2066_0_1, [Score=64.3, Expect=1e-13]} {RNA1509_21726, RNA1509_40185} {RNA1310_8409.1, RNA1509_21726} {RNA1509_21726, RNA815_3505.1}
11.	MligTC455_31587	246	5.12	Mlig455_061296	Neo: Irradiation Age: - Region-enriched R5: 2.189/0.00183 Region-enriched R4: 2.169/0.03995		0.959	-	-	0.959	-	-	-	Mlig455_061296 {REF} {Length: 3275} {TRANSSPLICED} {RNA1509_28161} {RNA1310_8643, RNA1509_28161} {RNA1509_28161, RNA815_2213}
12.	MligTC455_35947	415	8.64	Mlig455_030584	Neo: - Age: Up-Down-Down	ADAM19	0.955	-	-	0.955	-	-	-	Mlig455_030584 {REF} {Length: 7190} {TRANSSPLICED} {Pfam: Disintegrin [PF00200.25, score=57.2]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=52.5]; ADAM cysteine-rich [PF08516.14, score=32.2]; Reprolysin family propeptide [PF01562.21, score=28.0]; EGF-like domain [PF07974.15, score=21.9]} {Human: ENSG00000135074, ADAM19, ADAM metallopeptidase domain 19, [Score=155, Expect=1e-37]; ENSG00000149451, ADAM33, ADAM metallopeptidase domain 33, [Score=155, Expect=5e-38]; ENSG00000042980, ADAM28, ADAM metallopeptidase domain 28, [Score=149, Expect=3e-36]} {Mouse: ENSMUSG00000014725, Adam28, a disintegrin and metallopeptidase domain 28, [Score=167, Expect=4e-42]; ENSMUSG00000027318, Adam33, a disintegrin and metallopeptidase domain 33, [Score=161, Expect=4e-40]} {Dmel: FBgn0259110, mmd, mind-meld, [Score=180, Expect=1e-45]} {Celegans: WBGene00006804, unc-71, ADM-1 preproprotein, [Score=138, Expect=7e-33]} {Smed: dd_Smed_v6_8718_0_1, dd_Smed_v6_8718_0_1, [RH, Score=276, Expect=1e-75]} {RNA1509_10745, RNA1509_19087, RNA1509_43537, RNA1509_53139, RNA1509_56309} {RNA1310_2002.1, RNA1509_10745, RNA1509_19087, RNA1509_43537, RNA1509_53139, RNA1509_56309} {RNA1509_10745, RNA1509_19087, RNA1509_43537, RNA1509_53139, RNA1509_56309, RNA815_5766}
13.	MligTC455_42915	616	12.83	Mlig455_029696	Neo: - Age: Down-Up-Up	COX19	0.955	-	-	-	0.955	-	-	Mlig455_029696 {REF} {Length: 503} {TRANSSPLICED} {Pfam: CHCH domain [PF06747.15, score=32.5]; CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, [PF16860.7, score=21.6]; Cytochrome c oxidase assembly protein PET191 [PF10203.11, score=20.5]; NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) [PF05676.15, score=19.0]} {Human: ENSG00000240230, COX19, cytochrome c oxidase assembly factor COX19, [RH, Score=85.9, Expect=4e-23]} {Mouse: ENSMUSG00000045438, Cox19, cytochrome c oxidase assembly protein 19, [RH, Score=81.3, Expect=2e-21]} {Dmel: FBgn0260222, CG42496, [RH, Score=75.9, Expect=1e-19]} {Celegans: WBGene00009745, F45H11.5, [RH, Score=75.9, Expect=1e-19]} {Smed: dd_Smed_v6_2404_0_1, dd_Smed_v6_2404_0_1, [RH, Score=79.3, Expect=3e-21]} {RNA1509_11007} {RNA1310_64150.1, RNA1509_11007} {RNA1509_11007, RNA815_34075}
14.	MligTC455_51055	514	10.7	Mlig455_069959	Neo: - Age: -	STARD3	0.955	-	-	0.955	-	-	-	Mlig455_069959 {REF} {Length: 2332} {TRANSSPLICED} {Pfam: Cholesterol-capturing domain [PF10457.11, score=165.3]; START domain [PF01852.21, score=85.3]} {Human: ENSG00000131748, STARD3, StAR related lipid transfer domain containing 3, [RH, Score=202, Expect=2e-59]} {Mouse: ENSMUSG00000018167, Stard3, START domain containing 3, [RH, Score=202, Expect=2e-59]} {Dmel: FBgn0035028, Start1, [RH, Score=135, Expect=2e-34]} {Celegans: WBGene00017826, tag-340, [Score=108, Expect=1e-25]} {Smed: dd_Smed_v6_8800_0_1, dd_Smed_v6_8800_0_1, [RH, Score=156, Expect=1e-42]} {RNA1509_19658} {RNA1310_9573.1} {RNA815_3520}
15.	MligTC455_46112	2580	53.74	Mlig455_031078, Mlig455_031112	Neo: Int S/G2/M Age: Down-Up-Up		0.952	-	-	-	0.952	-	-	Mlig455_031078 {REF} {Length: 338} {TRANSSPLICED} {Dmel: FBgn0040907, mRpL33, mitochondrial ribosomal protein L33, [RH, Score=46.6, Expect=1e-08]} {Smed: dd_Smed_v6_2459_0_1, dd_Smed_v6_2459_0_1, [RH, Score=78.6, Expect=2e-21]} {RNA1509_5308} {RNA1310_98899, RNA1509_5308} {RNA1509_5308, RNA815_51351} Mlig455_031112 {REF} {Length: 321} {TRANSSPLICED} {Dmel: FBgn0040907, mRpL33, mitochondrial ribosomal protein L33, [RH, Score=46.6, Expect=1e-08]} {Smed: dd_Smed_v6_2459_0_1, dd_Smed_v6_2459_0_1, [RH, Score=78.6, Expect=2e-21]} {RNA1509_5308} {RNA1310_98899} {RNA815_51351}
16.	MligTC455_52090	411	8.57	Mlig455_059061	Neo: - Age: -		0.952	-	-	0.952	-	-	-	Mlig455_059061 {REF} {Length: 1888} {Pfam: GRIP domain [PF01465.22, score=38.4]} {RNA1509_16899} {RNA1310_11766} {RNA815_11234}
17.	MligTC455_33606	491	10.23	Mlig455_064651	Neo: - Age: -	KDM1A	0.951	-	-	0.951	-	-	-	Mlig455_064651 {REF} {Length: 3833} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=193.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=58.0]; FAD dependent oxidoreductase [PF01266.26, score=29.7]; FAD binding domain [PF00890.26, score=28.8]; Thi4 family [PF01946.19, score=27.9]; FAD binding domain [PF01494.21, score=25.8]; FAD dependent oxidoreductase [PF12831.9, score=23.4]; HI0933-like protein [PF03486.16, score=21.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.0]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=19.8]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [Score=112, Expect=4e-25]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [Score=112, Expect=2e-25]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=99.8, Expect=2e-21]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=109, Expect=2e-24]} {Smed: dd_Smed_v6_10899_0_1, dd_Smed_v6_10899_0_1, [RH, Score=415, Expect=2e-136]} {RNA1509_26570} {RNA1310_9348, RNA1509_26570} {RNA1509_26570, RNA815_2019}
18.	MligTC455_33607	482	10.03	Mlig455_064683	Neo: Int S/G2/M Age: -	KDM1A	0.951	-	-	0.951	-	-	-	Mlig455_064683 {REF} {Length: 3352} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=195.6]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=57.8]; FAD dependent oxidoreductase [PF01266.26, score=30.1]; Thi4 family [PF01946.19, score=29.4]; FAD binding domain [PF00890.26, score=28.9]; FAD binding domain [PF01494.21, score=25.0]; FAD dependent oxidoreductase [PF12831.9, score=23.6]; HI0933-like protein [PF03486.16, score=21.0]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.5]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=20.1]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [Score=114, Expect=9e-26]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [Score=115, Expect=5e-26]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=97.8, Expect=1e-20]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=106, Expect=1e-23]} {Smed: dd_Smed_v6_10899_0_1, dd_Smed_v6_10899_0_1, [RH, Score=415, Expect=1e-136]} {RNA1509_26570} {RNA1310_9348} {RNA815_2019}

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