Data search
Results for MligTC455_18101
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18101 | 519 | 10.82 | Mlig455_049090 | Neo: - Age: - |
RAB39A | Mlig455_049090 {REF} {Length: 3973} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=146.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=91.4]; ADP-ribosylation factor family [PF00025.23, score=41.0]; 50S ribosome-binding GTPase [PF01926.25, score=27.7]} {Human: ENSG00000179331, RAB39A, RAB39A, member RAS oncogene family, [Score=167, Expect=2e-51]; ENSG00000155961, RAB39B, RAB39B, member RAS oncogene family, [Score=165, Expect=1e-50]} {Mouse: ENSMUSG00000055069, Rab39, RAB39, member RAS oncogene family, [Score=166, Expect=4e-51]; ENSMUSG00000031202, Rab39b, RAB39B, member RAS oncogene family, [Score=165, Expect=1e-50]} {Dmel: FBgn0029959, Rab39, [Score=189, Expect=2e-60]} {Celegans: WBGene00004286, rab-39, RAB family, [Score=161, Expect=2e-49]} {Smed: dd_Smed_v6_3651_0_1, dd_Smed_v6_3651_0_1, [Score=191, Expect=2e-61]} {RNA1509_60116} {RNA1310_40488, RNA1509_60116} {RNA1509_60116, RNA815_35666} |
Cumulative graph for MligTC455_18101
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.794 | 3.791 | 0.52492 | 1.00000 | |
| RegionR2 | -1.134 | 3.791 | 0.04442 | 0.24786 | |
| RegionR3 | -0.026 | 3.791 | 0.95034 | 1.00000 | |
| RegionR4 | 0.54 | 3.791 | 0.29584 | 0.60757 | |
| RegionR5 | 0.366 | 3.791 | 0.33592 | 0.68194 | |
| RegionR6 | -0.384 | 3.791 | 0.39490 | 0.96843 | |
| RegionR7 | 0.367 | 3.791 | 0.50176 | 1.00000 | |
| RegionR8 | -0.522 | 3.791 | 0.50201 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.205 | 3.791 | 0.08711 | 0.79173 | |
| RegenerationR2 | 0.516 | 3.791 | 0.27385 | 0.71911 | |
| RegenerationR3 | -0.058 | 3.791 | 0.90181 | 1.00000 | |
| RegenerationR4 | 0.208 | 3.791 | 0.67575 | 0.94421 | |
| RegenerationR5 | 0.633 | 3.791 | 0.14635 | 0.56288 | |
| RegenerationR6 | 0.496 | 3.791 | 0.32256 | 0.66880 | |
| RegenerationBL | 0.563 | 3.791 | 0.32507 | 0.69179 | |
| RegenerationTP | -0.516 | 3.791 | 0.46380 | 0.87675 |
Genes with expression patterns similar to MligTC455_18101
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18101 | 519 | 10.82 | Mlig455_049090 | Neo: - Age: - |
RAB39A | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049090 {REF} {Length: 3973} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=146.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=91.4]; ADP-ribosylation factor family [PF00025.23, score=41.0]; 50S ribosome-binding GTPase [PF01926.25, score=27.7]} {Human: ENSG00000179331, RAB39A, RAB39A, member RAS oncogene family, [Score=167, Expect=2e-51]; ENSG00000155961, RAB39B, RAB39B, member RAS oncogene family, [Score=165, Expect=1e-50]} {Mouse: ENSMUSG00000055069, Rab39, RAB39, member RAS oncogene family, [Score=166, Expect=4e-51]; ENSMUSG00000031202, Rab39b, RAB39B, member RAS oncogene family, [Score=165, Expect=1e-50]} {Dmel: FBgn0029959, Rab39, [Score=189, Expect=2e-60]} {Celegans: WBGene00004286, rab-39, RAB family, [Score=161, Expect=2e-49]} {Smed: dd_Smed_v6_3651_0_1, dd_Smed_v6_3651_0_1, [Score=191, Expect=2e-61]} {RNA1509_60116} {RNA1310_40488, RNA1509_60116} {RNA1509_60116, RNA815_35666} |
| 2. | MligTC455_38492 | 259 | 5.4 | Mlig455_063161 | Neo: Neoblast Age: - Region-enriched R4: 6.942/0.00026 |
2.509 | - | - | 0.980 | 0.702 | - | 0.827 | Mlig455_063161 {REF} {Length: 585} {RNA1509_23906} {RNA1310_54544} {RNA815_25240} | |
| 3. | MligTC455_52090 | 411 | 8.57 | Mlig455_059061 | Neo: - Age: - |
2.492 | 0.802 | - | 0.954 | - | - | 0.736 | Mlig455_059061 {REF} {Length: 1888} {Pfam: GRIP domain [PF01465.22, score=38.4]} {RNA1509_16899} {RNA1310_11766} {RNA815_11234} | |
| 4. | MligTC455_19263 | 844 | 17.58 | Mlig455_008458 | Neo: - Age: - |
ERLEC1 | 2.438 | - | - | 0.967 | 0.705 | - | 0.766 | Mlig455_008458 {REF} {Length: 2376} {TRANSSPLICED} {Pfam: Glucosidase II beta subunit-like protein [PF07915.15, score=84.2]; Glucosidase II beta subunit-like protein [PF13015.8, score=22.2]} {Human: ENSG00000068912, ERLEC1, endoplasmic reticulum lectin 1, [Score=211, Expect=3e-62]} {Mouse: ENSMUSG00000020311, Erlec1, endoplasmic reticulum lectin 1, [Score=158, Expect=8e-43]} {Dmel: FBgn0032398, CG6766, [RH, Score=198, Expect=2e-57]} {Celegans: WBGene00013667, Y105E8A.2, [Score=197, Expect=4e-57]} {Smed: dd_Smed_v6_5006_0_1, dd_Smed_v6_5006_0_1, [RH, Score=252, Expect=3e-78]} {RNA1509_5317} {RNA1310_30870, RNA1509_5317} {RNA1509_5317, RNA815_1385.1} |
| 5. | MligTC455_33606 | 491 | 10.23 | Mlig455_064651 | Neo: - Age: - |
KDM1A | 1.747 | - | - | 0.953 | - | - | 0.794 | Mlig455_064651 {REF} {Length: 3833} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=193.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=58.0]; FAD dependent oxidoreductase [PF01266.26, score=29.7]; FAD binding domain [PF00890.26, score=28.8]; Thi4 family [PF01946.19, score=27.9]; FAD binding domain [PF01494.21, score=25.8]; FAD dependent oxidoreductase [PF12831.9, score=23.4]; HI0933-like protein [PF03486.16, score=21.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.0]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=19.8]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [Score=112, Expect=4e-25]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [Score=112, Expect=2e-25]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=99.8, Expect=2e-21]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=109, Expect=2e-24]} {Smed: dd_Smed_v6_10899_0_1, dd_Smed_v6_10899_0_1, [RH, Score=415, Expect=2e-136]} {RNA1509_26570} {RNA1310_9348, RNA1509_26570} {RNA1509_26570, RNA815_2019} |
| 6. | MligTC455_27947 | 353 | 7.35 | Mlig455_049351 | Neo: - Age: Up-Down-Down |
BCAT2 | 1.682 | 0.727 | - | 0.955 | - | - | - | Mlig455_049351 {REF} {Length: 3773} {Pfam: Amino-transferase class IV [PF01063.21, score=94.8]} {Human: ENSG00000105552, BCAT2, branched chain amino acid transaminase 2, [Score=364, Expect=2e-123]; ENSG00000060982, BCAT1, branched chain amino acid transaminase 1, [Score=362, Expect=2e-122]} {Mouse: ENSMUSG00000030826, Bcat2, branched chain aminotransferase 2, mitochondrial, [Score=379, Expect=3e-129]; ENSMUSG00000030268, Bcat1, branched chain aminotransferase 1, cytosolic, [Score=370, Expect=4e-126]} {Dmel: FBgn0030482, CG1673, [Score=370, Expect=2e-125]} {Celegans: WBGene00001149, bcat-1, Branched-chain-amino-acid aminotransferase, cytosolic, [RH, Score=372, Expect=2e-126]} {Smed: dd_Smed_v6_3721_0_1, dd_Smed_v6_3721_0_1, [RH, Score=410, Expect=7e-142]} {RNA1509_24419, RNA1509_52594} {RNA1310_21362.1, RNA1509_52594} {RNA1509_52594, RNA815_10816} |
| 7. | MligTC455_47998 | 567 | 11.82 | Mlig455_000429, Mlig455_000530 | Neo: - Age: - Region-enriched R4: 1.667/0.01537 |
SCARB2 | 1.672 | - | - | - | - | 0.950 | 0.722 | Mlig455_000429 {REF} {Length: 2558} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=373.9]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=250, Expect=2e-76]; ENSG00000135218, CD36, CD36 molecule, [Score=238, Expect=2e-71]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=253, Expect=3e-77]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=196, Expect=6e-56]} {Celegans: WBGene00013578, scav-2, SCAVenger receptor (CD36 family) related, [RH, Score=167, Expect=6e-45]} {Smed: dd_Smed_v6_2304_0_1, dd_Smed_v6_2304_0_1, [Score=295, Expect=8e-94]} {RNA1509_17179} {RNA1310_15296} {RNA815_6402.1} Mlig455_000530 {REF} {Length: 3098} {Pfam: CD36 family [PF01130.23, score=373.9]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=250, Expect=2e-76]; ENSG00000135218, CD36, CD36 molecule, [Score=238, Expect=2e-71]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=253, Expect=3e-77]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=196, Expect=6e-56]} {Celegans: WBGene00013578, scav-2, SCAVenger receptor (CD36 family) related, [RH, Score=167, Expect=6e-45]} {Smed: dd_Smed_v6_2304_0_1, dd_Smed_v6_2304_0_1, [Score=295, Expect=8e-94]} {RNA1509_17179} {RNA1310_15296, RNA1509_17179} {RNA1509_17179, RNA815_6402.1} |
| 8. | MligTC455_52455 | 332 | 6.92 | Mlig455_050541 | Neo: - Age: logFC(26M/2M)=-0.576 Region-specific R5: 2.003 Region-enriched R5: 1.701/0.00008 |
1.667 | - | 0.702 | 0.965 | - | - | - | Mlig455_050541 {REF} {Length: 2385} {TRANSSPLICED} {Smed: dd_Smed_v6_13667_0_2, dd_Smed_v6_13667_0_2, [Score=54.7, Expect=4e-08]} {RNA1509_17264, RNA1509_32423} {RNA1310_24557.1, RNA1509_32423} {RNA1509_32423, RNA815_10482} | |
| 9. | MligTC455_17674 | 662 | 13.78 | Mlig455_041522, Mlig455_069397 | Neo: - Age: Down-Up-Down |
GLRA3 | 0.96 | - | - | 0.960 | - | - | - | Mlig455_041522 {REF} {Length: 2176} {Pfam: Malate/L-lactate dehydrogenase [PF02615.16, score=358.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=93.3]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=131, Expect=2e-32]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=130, Expect=1e-32]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=129, Expect=1e-31]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=128, Expect=2e-31]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=130, Expect=3e-32]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=129, Expect=1e-31]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=129, Expect=1e-31]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=127, Expect=9e-32]} {Dmel: FBgn0037057, CG10512, [RH, Score=347, Expect=1e-113]} {Celegans: WBGene00012149, VF13D12L.3, [Score=358, Expect=8e-119]} {Smed: dd_Smed_v6_3440_0_2, dd_Smed_v6_3440_0_2, [RH, Score=363, Expect=7e-121]} {RNA1509_28375} {RNA1310_21770.1} {RNA815_5963.1} Mlig455_069397 {REF} {Length: 1252} {TRANSSPLICED} {Pfam: Malate/L-lactate dehydrogenase [PF02615.16, score=348.8]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=148.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=92.2]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=257, Expect=1e-76]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=254, Expect=6e-76]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=254, Expect=1e-75]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=252, Expect=7e-75]} {Mouse: ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=257, Expect=9e-77]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=254, Expect=1e-75]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=254, Expect=1e-75]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=252, Expect=5e-75]} {Dmel: FBgn0037057, CG10512, [Score=334, Expect=2e-107]} {Celegans: WBGene00012149, VF13D12L.3, [Score=351, Expect=2e-113]} {Smed: dd_Smed_v6_3440_0_2, dd_Smed_v6_3440_0_2, [Score=351, Expect=8e-114]} {RNA1509_28375} {RNA1310_21770.1} {RNA815_5963.1} |
| 10. | MligTC455_22424 | 293 | 6.11 | Mlig455_048176, Mlig455_048199 | Neo: - |
0.958 | - | - | - | 0.958 | - | - | Mlig455_048176 {REF} {Length: 2869} {TRANSSPLICED} {Pfam: Orn/Lys/Arg decarboxylase, major domain [PF01276.22, score=336.6]; Orn/Lys/Arg decarboxylase, C-terminal domain [PF03711.17, score=32.0]; Aminotransferase class I and II [PF00155.23, score=28.7]; Beta-eliminating lyase [PF01212.23, score=21.7]; Cys/Met metabolism PLP-dependent enzyme [PF01053.22, score=20.1]} {RNA1509_2305} {RNA1310_6434.1} {RNA815_2364.1} Mlig455_048199 {REF} {Length: 4544} {TRANSSPLICED} {Pfam: Orn/Lys/Arg decarboxylase, major domain [PF01276.22, score=336.8]; Orn/Lys/Arg decarboxylase, C-terminal domain [PF03711.17, score=32.0]; Aminotransferase class I and II [PF00155.23, score=29.2]; Beta-eliminating lyase [PF01212.23, score=22.1]; Cys/Met metabolism PLP-dependent enzyme [PF01053.22, score=20.3]} {RNA1509_2305} {RNA1310_6434.1} {RNA815_2364.1} |
|
| 11. | MligTC455_47761 | 494 | 10.28 | Mlig455_063306 | Neo: - Age: - |
NT5C3A | 0.958 | - | - | 0.958 | - | - | - | Mlig455_063306 {REF} {Length: 2529} {TRANSSPLICED} {Pfam: Pyrimidine 5'-nucleotidase (UMPH-1) [PF05822.14, score=255.4]; haloacid dehalogenase-like hydrolase [PF12710.9, score=26.5]} {Human: ENSG00000122643, NT5C3A, 5'-nucleotidase, cytosolic IIIA, [RH, Score=234, Expect=3e-74]} {Mouse: ENSMUSG00000029780, Nt5c3, 5'-nucleotidase, cytosolic III, [RH, Score=233, Expect=4e-74]} {Dmel: FBgn0034988, cN-IIIB, cytosolic 5'-nucleotidase IIIB, [RH, Score=184, Expect=5e-55]} {Celegans: WBGene00017775, F25B5.3, Putative cytosolic 5'-nucleotidase 3, [RH, Score=176, Expect=2e-51]} {Smed: dd_Smed_v6_3196_0_2, dd_Smed_v6_3196_0_2, [RH, Score=233, Expect=9e-74]} {RNA1509_27865, RNA1509_39066, RNA1509_45325} {RNA1310_20363, RNA1509_27865, RNA1509_39066, RNA1509_45325} {RNA1509_27865, RNA1509_39066, RNA1509_45325, RNA815_5383} |
| 12. | MligTC455_07096 | 203 | 4.24 | Mlig455_071172, Mlig455_071174 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.415/0.00748 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_071172 {REF} {Length: 1252} {NoTransDecoderORF} {RNA1310_32176} Mlig455_071174 {REF} {Length: 313} {NoTransDecoderORF} {RNA1310_32176} |
|
| 13. | MligTC455_21676 | 842 | 17.54 | Mlig455_054899 | Neo: - Age: - |
USP8 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_054899 {REF} {Length: 4637} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=271.7]; USP8 dimerisation domain [PF08969.13, score=62.1]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=51.3]; WW domain [PF00397.28, score=20.0]} {Human: ENSG00000138592, USP8, ubiquitin specific peptidase 8, [RH, Score=397, Expect=4e-121]} {Mouse: ENSMUSG00000027363, Usp8, ubiquitin specific peptidase 8, [RH, Score=397, Expect=9e-121]} {Dmel: FBgn0038862, Usp8, Ubiquitin specific protease 8, [RH, Score=291, Expect=8e-84]} {Celegans: WBGene00008441, usp-50, Ubiquitin Specific Protease, [RH, Score=189, Expect=2e-49]} {Smed: dd_Smed_v6_6489_0_1, dd_Smed_v6_6489_0_1, [RH, Score=413, Expect=5e-128]} {RNA1509_53998, RNA1509_58936, RNA1509_6279} {RNA1310_6785.1, RNA1509_53998, RNA1509_58936, RNA1509_6279} {RNA1509_53998, RNA1509_58936, RNA1509_6279, RNA815_11966} |
| 14. | MligTC455_33607 | 482 | 10.03 | Mlig455_064683 | Neo: Int S/G2/M Age: - |
KDM1A | 0.951 | - | - | 0.951 | - | - | - | Mlig455_064683 {REF} {Length: 3352} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=195.6]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=57.8]; FAD dependent oxidoreductase [PF01266.26, score=30.1]; Thi4 family [PF01946.19, score=29.4]; FAD binding domain [PF00890.26, score=28.9]; FAD binding domain [PF01494.21, score=25.0]; FAD dependent oxidoreductase [PF12831.9, score=23.6]; HI0933-like protein [PF03486.16, score=21.0]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.5]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=20.1]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [Score=114, Expect=9e-26]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [Score=115, Expect=5e-26]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=97.8, Expect=1e-20]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=106, Expect=1e-23]} {Smed: dd_Smed_v6_10899_0_1, dd_Smed_v6_10899_0_1, [RH, Score=415, Expect=1e-136]} {RNA1509_26570} {RNA1310_9348} {RNA815_2019} |
Berezikov Lab - 2020-2021 © ERIBA