TomoSeq data search

Data search

Results for MligTC455_38644

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38644

50

1.04

Mlig455_043885

Neo: -

Age: -

Region-enriched R6: 3.376/0.02584

Mlig455_043885 {REF} {Length: 4096} {Pfam: Immunoglobulin domain [PF13927.8, score=39.4]; Immunoglobulin domain [PF13895.8, score=26.3]} {Smed: dd_Smed_v6_11944_0_5, dd_Smed_v6_11944_0_5, [RH, Score=71.2, Expect=4e-13]} {RNA1509_17813} {RNA1310_12675, RNA1509_17813} {RNA1509_17813, RNA815_13692}

Cumulative graph for MligTC455_38644

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.769	1.263	0.99964	1.00000
RegionR2	0.055	1.263	0.56659	0.92759
RegionR3	1.122	1.263	0.21390	0.75515
RegionR4	-0.795	1.263	0.99963	1.00000
RegionR5	-0.611	1.263	0.78597	1.00000
RegionR6	3.376	1.263	0.00054	0.02584
RegionR7	2.792	1.263	0.02130	0.27205
RegionR8	-3.17	1.263	0.99970	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.016	1.263	1.00000	1.00000
RegenerationR2	-0.264	1.263	0.74896	0.97289
RegenerationR3	0.225	1.263	0.88118	1.00000
RegenerationR4	1.744	1.263	0.10501	0.49954
RegenerationR5	-0.293	1.263	0.91807	1.00000
RegenerationR6	-2.451	1.263	0.00963	0.12057
RegenerationBL	-0.693	1.263	0.90692	1.00000
RegenerationTP	0.713	1.263	0.68542	1.00000

Genes with expression patterns similar to MligTC455_38644

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38644	50	1.04	Mlig455_043885	Neo: - Age: - Region-enriched R6: 3.376/0.02584		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043885 {REF} {Length: 4096} {Pfam: Immunoglobulin domain [PF13927.8, score=39.4]; Immunoglobulin domain [PF13895.8, score=26.3]} {Smed: dd_Smed_v6_11944_0_5, dd_Smed_v6_11944_0_5, [RH, Score=71.2, Expect=4e-13]} {RNA1509_17813} {RNA1310_12675, RNA1509_17813} {RNA1509_17813, RNA815_13692}
2.	MligTC455_47109	27	0.55	Mlig455_053890	Neo: - Age: -		1.887	0.933	0.954	-	-	-	-	Mlig455_053890 {REF} {Length: 579} {NoTransDecoderORF} {RNA1509_22152} {RNA1310_48631} {RNA815_40776}
3.	MligTC455_19878	674	14.04	Mlig455_025244, Mlig455_025266, Mlig455_025621	Neo: - Age: Up-Down-Up Region-enriched R6: 4.115/0.00000 Region-enriched R7: 3.098/0.01198 Regeneration-upregulated BL: 3.728 Regeneration-enriched BL: 3.728	ASCL4	1.775	0.975	0.800	-	-	-	-	Mlig455_025244 {REF} {Length: 2889} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=59.3]} {Human: ENSG00000187855, ASCL4, achaete-scute family bHLH transcription factor 4, [RH, Score=68.2, Expect=3e-13]; ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [RH, Score=66.2, Expect=2e-12]} {Mouse: ENSMUSG00000035951, Ascl3, achaete-scute family bHLH transcription factor 3, [RH, Score=67.0, Expect=5e-13]; ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [RH, Score=66.6, Expect=1e-12]} {Dmel: FBgn0000022, ac, achaete, [RH, Score=66.2, Expect=1e-12]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [Score=63.2, Expect=2e-11]} {Smed: dd_Smed_v6_1854_0_1, dd_Smed_v6_1854_0_1, [RH, Score=80.9, Expect=8e-19]} {RNA1509_60112} {RNA1310_16083} {RNA815_25636.1} Mlig455_025266 {REF} {Length: 1966} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=59.5]} {Human: ENSG00000187855, ASCL4, achaete-scute family bHLH transcription factor 4, [RH, Score=67.8, Expect=4e-13]; ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [RH, Score=66.2, Expect=3e-12]} {Mouse: ENSMUSG00000035951, Ascl3, achaete-scute family bHLH transcription factor 3, [RH, Score=67.0, Expect=6e-13]; ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [RH, Score=66.2, Expect=1e-12]} {Dmel: FBgn0000022, ac, achaete, [RH, Score=66.2, Expect=1e-12]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [Score=61.6, Expect=8e-11]} {Smed: dd_Smed_v6_1854_0_1, dd_Smed_v6_1854_0_1, [RH, Score=79.3, Expect=3e-18]} {RNA1509_60112} {RNA1310_16083} {RNA815_25636.1} Mlig455_025621 {REF} {Length: 1718} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=59.1]} {Human: ENSG00000187855, ASCL4, achaete-scute family bHLH transcription factor 4, [RH, Score=67.8, Expect=4e-13]; ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [RH, Score=66.2, Expect=3e-12]} {Mouse: ENSMUSG00000035951, Ascl3, achaete-scute family bHLH transcription factor 3, [RH, Score=66.6, Expect=6e-13]; ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [RH, Score=66.2, Expect=1e-12]} {Dmel: FBgn0000022, ac, achaete, [RH, Score=66.2, Expect=1e-12]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [Score=62.8, Expect=3e-11]} {Smed: dd_Smed_v6_1854_0_1, dd_Smed_v6_1854_0_1, [RH, Score=79.3, Expect=3e-18]} {RNA1509_60112} {RNA1310_20032, RNA1509_60112} {RNA1509_60112, RNA815_25636.1}
4.	MligTC455_50067	66	1.38	Mlig455_053514	Neo: - Age: logFC(26M/2M)=-0.733		1.67	-	0.952	0.718	-	-	-	Mlig455_053514 {REF} {Length: 2509} {RNA1509_46424} {RNA1310_8850} {RNA815_3382.1}
5.	MligTC455_48171	26	0.54	Mlig455_006644	Neo: - Age: -	PCDHA8	0.982	-	-	0.982	-	-	-	Mlig455_006644 {REF} {Length: 3783} {Pfam: Cadherin domain [PF00028.19, score=303.5]; Cadherin-like [PF16184.7, score=28.5]; Cadherin-like [PF08266.14, score=23.8]} {Human: ENSG00000204962, PCDHA8, protocadherin alpha 8, [RH, Score=260, Expect=6e-72]} {Mouse: ENSMUSG00000035566, Pcdh17, protocadherin 17, [RH, Score=266, Expect=2e-73]} {Dmel: FBgn0284247, ds, dachsous, [Score=245, Expect=7e-66]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=179, Expect=3e-45]} {Smed: dd_Smed_v6_17019_0_2, dd_Smed_v6_17019_0_2, [RH, Score=340, Expect=5e-100]} {RNA1509_45762} {RNA1310_4962} {RNA815_31557}
6.	MligTC455_29090	29	0.61	Mlig455_007617, Mlig455_063238, Mlig455_066727, Mlig455_066741	Neo: - Age: Down-Up-Down		0.971	-	0.971	-	-	-	-	Mlig455_007617 {REF} {Length: 204} {NoTransDecoderORF} {RNA1310_16838} {RNA815_16228} Mlig455_063238 {REF} {Length: 1745} {RNA1310_16838} {RNA815_16228} Mlig455_066727 {REF} {Length: 1604} {RNA1310_16838} {RNA815_16228} Mlig455_066741 {REF} {Length: 1298} {RNA1310_16838} {RNA815_16228}
7.	MligTC455_12027	121	2.52	Mlig455_050667	Neo: - Age: Up-Down-Up Region-enriched R6: 5.711/0.00000		0.969	0.969	-	-	-	-	-	Mlig455_050667 {REF} {Length: 1275} {NoTransDecoderORF} {RNA1310_48786} {RNA815_51379}
8.	MligTC455_16755	280	5.84	Mlig455_050205, Mlig455_066950	Neo: - Age: - Region-enriched R2: 3.333/0.01357		0.963	-	-	0.963	-	-	-	Mlig455_050205 {REF} {Length: 1757} {TRANSSPLICED} {Pfam: Mediator complex protein [PF10280.11, score=40.6]} {Smed: dd_Smed_v6_9527_0_1, dd_Smed_v6_9527_0_1, [RH, Score=68.6, Expect=2e-15]} {RNA1509_46152, RNA1509_49192} {RNA1310_50235.2, RNA1509_49192} {RNA1509_49192, RNA815_30385} Mlig455_066950 {REF} {Length: 1820} {TRANSSPLICED} {Pfam: Mediator complex protein [PF10280.11, score=40.6]} {Smed: dd_Smed_v6_9527_0_1, dd_Smed_v6_9527_0_1, [RH, Score=68.6, Expect=2e-15]} {RNA1509_43954, RNA1509_46152} {RNA1310_50235.1, RNA1509_43954, RNA1509_46152} {RNA1509_43954, RNA1509_46152, RNA815_30385}
9.	MligTC455_19250	57	1.18	Mlig455_050978	Neo: - Age: -	RAC1	0.963	-	-	0.963	-	-	-	Mlig455_050978 {REF} {Length: 1505} {Pfam: Ras family [PF00071.24, score=152.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=64.4]; ADP-ribosylation factor family [PF00025.23, score=23.1]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=208, Expect=2e-68]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=203, Expect=2e-66]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=201, Expect=2e-65]; ENSG00000177105, RHOG, ras homolog family member G, [Score=199, Expect=7e-65]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=208, Expect=1e-68]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=203, Expect=1e-66]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=200, Expect=3e-65]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=199, Expect=5e-65]} {Dmel: FBgn0010333, Rac1, [Score=205, Expect=2e-67]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=211, Expect=6e-70]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=199, Expect=2e-65]} {RNA1310_32838}
10.	MligTC455_04221	189	3.93	Mlig455_036494, Mlig455_037536	Neo: - Age: Down-Up-Up, logFC(26M/2M)=2.401		0.96	-	-	0.960	-	-	-	Mlig455_036494 {REF} {Length: 1287} {Pfam: Innexin [PF00876.20, score=336.4]} {Dmel: FBgn0085387, shakB, shaking B, [RH, Score=113, Expect=4e-27]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=231, Expect=1e-70]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [RH, Score=357, Expect=6e-119]} {RNA1509_17737} {RNA1310_16884} {RNA815_8573} Mlig455_037536 {REF} {Length: 1859} {Pfam: Innexin [PF00876.20, score=336.4]} {Dmel: FBgn0085387, shakB, shaking B, [RH, Score=113, Expect=4e-27]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=231, Expect=1e-70]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [RH, Score=357, Expect=6e-119]} {RNA1509_17737} {RNA1310_16884} {RNA815_8573}
11.	MligTC455_36667	84	1.75	Mlig455_016177	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.440 Region-enriched R2: 4.490/0.00556 Region-enriched R7: 4.016/0.01613		0.959	-	-	0.959	-	-	-	Mlig455_016177 {REF} {Length: 3035} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=47.6]; Immunoglobulin domain [PF13927.8, score=47.0]; Immunoglobulin domain [PF00047.27, score=32.1]; Immunoglobulin domain [PF13895.8, score=27.4]; Natural killer cell receptor 2B4 [PF11465.10, score=26.4]; Immunoglobulin V-set domain [PF07686.19, score=23.5]} {Dmel: FBgn0259245, DIP-beta, Dpr-interacting protein beta, [Score=58.9, Expect=3e-09]} {Celegans: WBGene00006985, zig-8, Zwei Ig domain protein zig-8, [RH, Score=57.0, Expect=4e-09]} {Smed: dd_Smed_v6_21969_0_1, dd_Smed_v6_21969_0_1, [Score=72.0, Expect=6e-14]} {RNA1509_49618} {RNA1310_15195} {RNA815_58259}
12.	MligTC455_20582	38	0.8	Mlig455_007847, Mlig455_021131	Neo: - Age: - Region-enriched R4: 8.037/0.00054	CCKBR	0.958	-	-	-	-	-	0.958	Mlig455_007847 {REF} {Length: 2426} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=112.4]} {Human: ENSG00000110148, CCKBR, cholecystokinin B receptor, [Score=79.3, Expect=3e-15]} {Mouse: ENSMUSG00000030898, Cckbr, cholecystokinin B receptor, [Score=73.6, Expect=1e-13]} {Dmel: FBgn0050106, CCHa1-R, CCHamide-1 receptor, [Score=48.9, Expect=6e-06]} {Celegans: WBGene00013187, npr-34, NeuroPeptide Receptor family, [Score=82.4, Expect=1e-16]} {Smed: dd_Smed_v6_15151_0_1, dd_Smed_v6_15151_0_1, [Score=62.4, Expect=2e-10]} {RNA1310_74488} {RNA815_51301} Mlig455_021131 {REF} {Length: 1858} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=112.4]} {Human: ENSG00000110148, CCKBR, cholecystokinin B receptor, [Score=79.3, Expect=3e-15]} {Mouse: ENSMUSG00000030898, Cckbr, cholecystokinin B receptor, [Score=73.6, Expect=1e-13]} {Dmel: FBgn0050106, CCHa1-R, CCHamide-1 receptor, [Score=48.9, Expect=6e-06]} {Celegans: WBGene00013187, npr-34, NeuroPeptide Receptor family, [Score=82.4, Expect=1e-16]} {Smed: dd_Smed_v6_15151_0_1, dd_Smed_v6_15151_0_1, [Score=62.4, Expect=2e-10]} {RNA1310_74488} {RNA815_51301}
13.	MligTC455_22736	174	3.62	Mlig455_036576	Neo: - Age: - Region-enriched R6: 5.263/0.00000 Region-enriched R7: 4.741/0.00000 Regeneration-depleted R6: -8.651 Regeneration-depleted BL: -7.996	PHEX	0.953	0.953	-	-	-	-	-	Mlig455_036576 {REF} {Length: 3336} {Pfam: Peptidase family M13 [PF01431.23, score=134.4]; Peptidase family M13 [PF05649.15, score=87.9]} {Human: ENSG00000102174, PHEX, phosphate regulating endopeptidase homolog X-linked, [Score=155, Expect=1e-38]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=154, Expect=3e-38]; ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=154, Expect=2e-38]; ENSG00000196549, MME, membrane metalloendopeptidase, [Score=148, Expect=2e-36]} {Mouse: ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=152, Expect=6e-38]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=152, Expect=8e-38]; ENSMUSG00000027820, Mme, membrane metallo endopeptidase, [Score=148, Expect=1e-36]; ENSMUSG00000057457, Phex, phosphate regulating endopeptidase homolog, X-linked, [Score=146, Expect=6e-36]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=135, Expect=2e-32]} {Celegans: WBGene00013926, nep-1, Neprilysin-1, [Score=155, Expect=4e-39]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=149, Expect=3e-37]} {RNA1509_47798} {RNA1310_6773, RNA1509_47798} {RNA1509_47798, RNA815_4414}
14.	MligTC455_20875	83	1.74	Mlig455_046583	Neo: - Age: Up-Down-Down	CSMD2	0.952	-	-	0.952	-	-	-	Mlig455_046583 {REF} {Length: 3648} {Pfam: CUB domain [PF00431.22, score=136.9]} {Human: ENSG00000121904, CSMD2, CUB and Sushi multiple domains 2, [Score=55.8, Expect=5e-07]} {Mouse: ENSMUSG00000028804, Csmd2, CUB and Sushi multiple domains 2, [Score=55.1, Expect=4e-07]; ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=52.4, Expect=3e-06]} {Dmel: FBgn0085431, CG34402, [RH, Score=91.3, Expect=1e-18]} {Smed: dd_Smed_v6_19493_0_1, dd_Smed_v6_19493_0_1, [Score=265, Expect=1e-76]} {RNA1509_49507} {RNA1310_26376} {RNA815_21454}

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