Data search
Results for MligTC455_19250
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19250 | 57 | 1.18 | Mlig455_050978 | Neo: - Age: - |
RAC1 | Mlig455_050978 {REF} {Length: 1505} {Pfam: Ras family [PF00071.24, score=152.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=64.4]; ADP-ribosylation factor family [PF00025.23, score=23.1]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=208, Expect=2e-68]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=203, Expect=2e-66]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=201, Expect=2e-65]; ENSG00000177105, RHOG, ras homolog family member G, [Score=199, Expect=7e-65]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=208, Expect=1e-68]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=203, Expect=1e-66]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=200, Expect=3e-65]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=199, Expect=5e-65]} {Dmel: FBgn0010333, Rac1, [Score=205, Expect=2e-67]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=211, Expect=6e-70]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=199, Expect=2e-65]} {RNA1310_32838} |
Cumulative graph for MligTC455_19250
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.954 | 1.501 | 1.00000 | 1.00000 | |
| RegionR2 | 1.207 | 1.501 | 0.25230 | 0.63166 | |
| RegionR3 | -3.05 | 1.501 | 1.00000 | 1.00000 | |
| RegionR4 | 1.281 | 1.501 | 0.27669 | 0.58338 | |
| RegionR5 | 2.112 | 1.501 | 0.03568 | 0.14672 | |
| RegionR6 | 1.492 | 1.501 | 0.16366 | 0.71796 | |
| RegionR7 | 3.049 | 1.501 | 0.01161 | 0.18819 | |
| RegionR8 | -3.138 | 1.501 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.33 | 1.501 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.014 | 1.501 | 0.99188 | 1.00000 | |
| RegenerationR3 | 4.262 | 1.501 | 0.00344 | 0.10440 | |
| RegenerationR4 | 0.644 | 1.501 | 0.51497 | 0.87747 | |
| RegenerationR5 | -1.494 | 1.501 | 0.07742 | 0.43448 | |
| RegenerationR6 | 0.635 | 1.501 | 0.49507 | 0.80236 | |
| RegenerationBL | -3.675 | 1.501 | 1.00000 | 1.00000 | |
| RegenerationTP | 1.568 | 1.501 | 0.46059 | 0.87448 |
Genes with expression patterns similar to MligTC455_19250
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19250 | 57 | 1.18 | Mlig455_050978 | Neo: - Age: - |
RAC1 | 5 | - | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_050978 {REF} {Length: 1505} {Pfam: Ras family [PF00071.24, score=152.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=64.4]; ADP-ribosylation factor family [PF00025.23, score=23.1]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=208, Expect=2e-68]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=203, Expect=2e-66]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=201, Expect=2e-65]; ENSG00000177105, RHOG, ras homolog family member G, [Score=199, Expect=7e-65]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=208, Expect=1e-68]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=203, Expect=1e-66]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=200, Expect=3e-65]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=199, Expect=5e-65]} {Dmel: FBgn0010333, Rac1, [Score=205, Expect=2e-67]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=211, Expect=6e-70]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=199, Expect=2e-65]} {RNA1310_32838} |
| 2. | MligTC455_36667 | 84 | 1.75 | Mlig455_016177 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.440 Region-enriched R2: 4.490/0.00556 |
0.991 | - | - | 0.991 | - | - | - | Mlig455_016177 {REF} {Length: 3035} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=47.6]; Immunoglobulin domain [PF13927.8, score=47.0]; Immunoglobulin domain [PF00047.27, score=32.1]; Immunoglobulin domain [PF13895.8, score=27.4]; Natural killer cell receptor 2B4 [PF11465.10, score=26.4]; Immunoglobulin V-set domain [PF07686.19, score=23.5]} {Dmel: FBgn0259245, DIP-beta, Dpr-interacting protein beta, [Score=58.9, Expect=3e-09]} {Celegans: WBGene00006985, zig-8, Zwei Ig domain protein zig-8, [RH, Score=57.0, Expect=4e-09]} {Smed: dd_Smed_v6_21969_0_1, dd_Smed_v6_21969_0_1, [Score=72.0, Expect=6e-14]} {RNA1509_49618} {RNA1310_15195} {RNA815_58259} | |
| 3. | MligTC455_19768 | 85 | 1.77 | Mlig455_024294 | Neo: - Age: Up-Down-Down |
0.97 | - | - | 0.970 | - | - | - | Mlig455_024294 {REF} {Length: 7503} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=45.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=27.8]} {RNA1509_39072} {RNA1310_19077.2} {RNA815_33603} | |
| 4. | MligTC455_46744 | 268 | 5.58 | Mlig455_018072 | Neo: - |
0.97 | - | - | 0.970 | - | - | - | Mlig455_018072 {REF} {Length: 1515} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=19.2]} {RNA1509_52366} {RNA1310_36796} {RNA815_38428} | |
| 5. | MligTC455_48652 | 153 | 3.18 | Mlig455_005843 | Neo: Irradiation Age: logFC(26M/2M)=0.247 |
GUCD1 | 0.968 | - | - | 0.968 | - | - | - | Mlig455_005843 {REF} {Length: 4560} {TRANSSPLICED} {Pfam: Guanylylate cyclase [PF09778.11, score=114.3]; Peptidase C39 family [PF03412.17, score=21.0]; Peptidase_C39 like family [PF13529.8, score=20.6]} {Human: ENSG00000138867, GUCD1, guanylyl cyclase domain containing 1, [Score=69.7, Expect=4e-12]} {Mouse: ENSMUSG00000033416, Gucd1, guanylyl cyclase domain containing 1, [RH, Score=67.0, Expect=8e-12]} {Dmel: FBgn0040375, CG13760, [Score=89.7, Expect=2e-19]} {RNA1509_32403, RNA1509_54650} {RNA1310_5978, RNA1509_32403, RNA1509_54650} {RNA1509_32403, RNA1509_54650, RNA815_11367} |
| 6. | MligTC455_16176 | 76 | 1.58 | Mlig455_048486 | Neo: Int S/G2/M Age: - |
GCM1 | 0.967 | - | - | 0.967 | - | - | - | Mlig455_048486 {REF} {Length: 2372} {Pfam: GCM motif protein [PF03615.17, score=223.0]} {Human: ENSG00000137270, GCM1, glial cells missing homolog 1, [RH, Score=197, Expect=3e-57]; ENSG00000124827, GCM2, glial cells missing homolog 2, [RH, Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000023333, Gcm1, glial cells missing homolog 1, [RH, Score=192, Expect=1e-55]; ENSMUSG00000021362, Gcm2, glial cells missing homolog 2, [RH, Score=189, Expect=1e-53]} {Dmel: FBgn0014179, gcm, glial cells missing, [RH, Score=230, Expect=2e-69]} {Smed: dd_Smed_v6_15107_0_1, dd_Smed_v6_15107_0_1, [RH, Score=186, Expect=3e-54]} {RNA1509_58813} {RNA1310_66943} {RNA815_43872} |
| 7. | MligTC455_04221 | 189 | 3.93 | Mlig455_036494, Mlig455_037536 | Neo: - |
0.966 | - | - | 0.966 | - | - | - | Mlig455_036494 {REF} {Length: 1287} {Pfam: Innexin [PF00876.20, score=336.4]} {Dmel: FBgn0085387, shakB, shaking B, [RH, Score=113, Expect=4e-27]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=231, Expect=1e-70]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [RH, Score=357, Expect=6e-119]} {RNA1509_17737} {RNA1310_16884} {RNA815_8573} Mlig455_037536 {REF} {Length: 1859} {Pfam: Innexin [PF00876.20, score=336.4]} {Dmel: FBgn0085387, shakB, shaking B, [RH, Score=113, Expect=4e-27]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=231, Expect=1e-70]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [RH, Score=357, Expect=6e-119]} {RNA1509_17737} {RNA1310_16884} {RNA815_8573} |
|
| 8. | MligTC455_52522 | 60 | 1.24 | Mlig455_021733 | Neo: - Age: - |
RAC1 | 0.965 | - | - | 0.965 | - | - | - | Mlig455_021733 {REF} {Length: 1405} {Pfam: Ras family [PF00071.24, score=161.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=73.7]; ADP-ribosylation factor family [PF00025.23, score=24.0]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=217, Expect=5e-72]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=213, Expect=3e-70]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=208, Expect=2e-68]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=217, Expect=4e-72]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=213, Expect=2e-70]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=209, Expect=3e-69]} {Dmel: FBgn0010333, Rac1, [Score=212, Expect=2e-70]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=209, Expect=2e-69]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=207, Expect=7e-69]} {RNA1509_54289} {RNA1310_38039, RNA1509_54289} {RNA1509_54289, RNA815_55313} |
| 9. | MligTC455_38644 | 50 | 1.04 | Mlig455_043885 | Neo: - Age: - Region-enriched R6: 3.376/0.02584 |
0.963 | - | - | 0.963 | - | - | - | Mlig455_043885 {REF} {Length: 4096} {Pfam: Immunoglobulin domain [PF13927.8, score=39.4]; Immunoglobulin domain [PF13895.8, score=26.3]} {Smed: dd_Smed_v6_11944_0_5, dd_Smed_v6_11944_0_5, [RH, Score=71.2, Expect=4e-13]} {RNA1509_17813} {RNA1310_12675, RNA1509_17813} {RNA1509_17813, RNA815_13692} | |
| 10. | MligTC455_07174 | 94 | 1.96 | Mlig455_007312 | Neo: - Age: Up-Down-Down |
0.962 | - | - | 0.962 | - | - | - | Mlig455_007312 {REF} {Length: 240} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56237} {RNA1310_59534.2} {RNA815_29807} | |
| 11. | MligTC455_18814 | 44 | 0.91 | Mlig455_001664 | Neo: - Age: Up-Down-Up |
0.96 | - | - | - | - | 0.960 | - | Mlig455_001664 {REF} {Length: 1673} {Smed: dd_Smed_v6_18585_0_1, dd_Smed_v6_18585_0_1, [Score=100, Expect=1e-23]} {RNA1310_49005} {RNA815_48672} | |
| 12. | MligTC455_40463 | 120 | 2.51 | Mlig455_028008 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_028008 {REF} {Length: 67} {NoTransDecoderORF} {RNA1509_5045} {RNA1310_14222} {RNA815_350} | |
| 13. | MligTC455_20875 | 83 | 1.74 | Mlig455_046583 | Neo: - Age: Up-Down-Down |
CSMD2 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_046583 {REF} {Length: 3648} {Pfam: CUB domain [PF00431.22, score=136.9]} {Human: ENSG00000121904, CSMD2, CUB and Sushi multiple domains 2, [Score=55.8, Expect=5e-07]} {Mouse: ENSMUSG00000028804, Csmd2, CUB and Sushi multiple domains 2, [Score=55.1, Expect=4e-07]; ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=52.4, Expect=3e-06]} {Dmel: FBgn0085431, CG34402, [RH, Score=91.3, Expect=1e-18]} {Smed: dd_Smed_v6_19493_0_1, dd_Smed_v6_19493_0_1, [Score=265, Expect=1e-76]} {RNA1509_49507} {RNA1310_26376} {RNA815_21454} |
| 14. | MligTC455_45458 | 2463 | 51.31 | Mlig455_037559 | Neo: - Age: - |
VWA5A | 0.951 | - | - | - | 0.951 | - | - | Mlig455_037559 {REF} {Length: 3202} {TRANSSPLICED} {Pfam: von Willebrand factor type A domain [PF13768.8, score=86.3]; Vault protein inter-alpha-trypsin domain [PF08487.12, score=57.8]; von Willebrand factor type A domain [PF13519.8, score=40.0]; von Willebrand factor type A domain [PF00092.30, score=38.4]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=27.4]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=169, Expect=5e-43]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [Score=186, Expect=2e-48]} {Smed: dd_Smed_v6_1027_0_2, dd_Smed_v6_1027_0_2, [Score=182, Expect=2e-48]} {RNA1509_17712, RNA1509_3761} {RNA1310_3935.1, RNA1509_17712, RNA1509_3761} {RNA1509_17712, RNA1509_3761, RNA815_2368.1} |
| 15. | MligTC455_49429 | 98 | 2.04 | Mlig455_005236 | Neo: Irradiation Age: - Region-enriched R5: 2.994/0.00137 |
0.951 | - | 0.951 | - | - | - | - | Mlig455_005236 {REF} {Length: 3402} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=45.6]; Zinc finger, C2H2 type [PF00096.28, score=25.0]; C2H2-type zinc finger [PF13894.8, score=21.4]} {Smed: dd_Smed_v6_36433_0_1, dd_Smed_v6_36433_0_1, [RH, Score=177, Expect=3e-48]} {RNA1509_19024, RNA1509_42693} {RNA1310_8889, RNA1509_19024, RNA1509_42693} {RNA1509_19024, RNA1509_42693, RNA815_15557} | |
| 16. | MligTC455_22841 | 20 | 0.41 | Mlig455_066350 | Neo: - Age: - |
0.95 | - | - | 0.950 | - | - | - | Mlig455_066350 {REF} {Length: 694} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35987, RNA1509_46319} {RNA1310_35806, RNA1509_35987, RNA1509_46319} {RNA1509_35987, RNA1509_46319, RNA815_14596} | |
| 17. | MligTC455_30456 | 610 | 12.7 | Mlig455_032197, Mlig455_051152 | Neo: - Age: Down-Down-Up |
FTCD | 0.95 | - | - | - | 0.950 | - | - | Mlig455_032197 {REF} {Length: 1829} {Pfam: Formiminotransferase domain, N-terminal subdomain [PF07837.14, score=233.8]; Formiminotransferase domain [PF02971.16, score=198.1]; Formiminotransferase-cyclodeaminase [PF04961.14, score=177.4]} {Human: ENSG00000160282, FTCD, formimidoyltransferase cyclodeaminase, [RH, Score=562, Expect=0.0]} {Mouse: ENSMUSG00000001155, Ftcd, formiminotransferase cyclodeaminase, [RH, Score=570, Expect=0.0]} {Smed: dd_Smed_v6_7815_0_1, dd_Smed_v6_7815_0_1, [RH, Score=399, Expect=2e-133]} {RNA1509_51900} {RNA1310_13312} {RNA815_5334} Mlig455_051152 {REF} {Length: 2137} {Pfam: Formiminotransferase domain, N-terminal subdomain [PF07837.14, score=233.7]; Formiminotransferase domain [PF02971.16, score=198.1]; Formiminotransferase-cyclodeaminase [PF04961.14, score=177.3]} {Human: ENSG00000160282, FTCD, formimidoyltransferase cyclodeaminase, [RH, Score=563, Expect=0.0]} {Mouse: ENSMUSG00000001155, Ftcd, formiminotransferase cyclodeaminase, [RH, Score=571, Expect=0.0]} {Smed: dd_Smed_v6_7815_0_1, dd_Smed_v6_7815_0_1, [RH, Score=400, Expect=2e-134]} {RNA1509_29292} {RNA1310_13312} {RNA815_5334} |
| 18. | MligTC455_34460 | 1343 | 27.99 | Mlig455_008843, Mlig455_008945 | Neo: - Age: - Region-enriched R7: 4.606/0.00000 |
CELF3, CELF6 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_008843 {REF} {Length: 4989} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=180.7]; RNA recognition motif [PF16367.7, score=26.7]} {Human: ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [RH, Score=419, Expect=2e-142]} {Mouse: ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [RH, Score=433, Expect=5e-148]} {Dmel: FBgn0262475, bru2, bruno 2, [Score=350, Expect=2e-112]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [RH, Score=270, Expect=8e-85]} {Smed: dd_Smed_v6_14010_0_2, dd_Smed_v6_14010_0_2, [Score=442, Expect=5e-151]} {RNA1509_31520, RNA1509_34271} {RNA1310_10251.1, RNA1509_31520, RNA1509_34271} {RNA1509_31520, RNA1509_34271, RNA815_6403.2} Mlig455_008945 {REF} {Length: 2838} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=128.6]} {Human: ENSG00000159409, CELF3, CUGBP Elav-like family member 3, [Score=311, Expect=5e-101]; ENSG00000161082, CELF5, CUGBP Elav-like family member 5, [Score=309, Expect=4e-100]; ENSG00000273025, AC009690.3, novel transcript, [Score=306, Expect=8e-99]; ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [Score=306, Expect=8e-99]} {Mouse: ENSMUSG00000024268, Celf4, CUGBP, Elav-like family member 4, [Score=315, Expect=5e-102]; ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [Score=310, Expect=1e-101]; ENSMUSG00000032297, Celf6, CUGBP, Elav-like family member 6, [Score=308, Expect=1e-99]} {Dmel: FBgn0264001, bru3, bruno 3, [Score=305, Expect=1e-99]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [RH, Score=172, Expect=1e-48]} {Smed: dd_Smed_v6_11349_0_1, dd_Smed_v6_11349_0_1, [Score=358, Expect=6e-120]} {RNA1509_34271} {RNA1310_10251.1} {RNA815_6403.2} |
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