M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_38650

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38650 189 3.94 Mlig455_026837

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.460

Region-enriched R4: 2.120/0.00387

 Mlig455_026837 {REF} {Length: 2348} {Dmel: FBgn0011705, rost, rolling stone, [RH, Score=70.5, Expect=1e-13]} {RNA1509_29979} {RNA1310_35196} {RNA815_13054.1}

Cumulative graph for MligTC455_38650

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.58 2.649 0.03433 0.46303
RegionR2 0.999 2.649 0.13546 0.45705
RegionR3 -0.205 2.649 0.73973 1.00000
RegionR4 2.12 2.649 0.00029 0.00387
RegionR5 -1.968 2.649 0.00218 0.01863
RegionR6 -1.573 2.649 0.02756 0.30512
RegionR7 -0.561 2.649 0.53236 1.00000
RegionR8 -1.392 2.649 0.27845 0.90363

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.608 2.649 0.04406 0.67849
RegenerationR2 -0.25 2.649 0.63959 0.93102
RegenerationR3 -1.427 2.649 0.04798 0.38120
RegenerationR4 -1.509 2.649 0.00958 0.14786
RegenerationR5 -1.766 2.649 0.04003 0.32957
RegenerationR6 -0.451 2.649 0.61656 0.87860
RegenerationBL -1.167 2.649 0.40365 0.77271
RegenerationTP -2.646 2.649 0.12574 0.53618


Genes with expression patterns similar to MligTC455_38650

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38650 189 3.94 Mlig455_026837

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.460

Region-enriched R4: 2.120/0.00387

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_026837 {REF} {Length: 2348} {Dmel: FBgn0011705, rost, rolling stone, [RH, Score=70.5, Expect=1e-13]} {RNA1509_29979} {RNA1310_35196} {RNA815_13054.1}
2. MligTC455_16292 176 3.67 Mlig455_029213

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.543

Region-enriched R2: 3.505/0.04173

 PRKAR2B 3.308 0.777 0.809 - 0.761 0.961 - Mlig455_029213 {REF} {Length: 1890} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=75.9]} {Human: ENSG00000005249, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=51.6, Expect=1e-06]; ENSG00000284096, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=51.6, Expect=1e-06]} {Mouse: ENSMUSG00000002997, Prkar2b, protein kinase, cAMP dependent regulatory, type II beta, [Score=51.2, Expect=1e-06]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=52.8, Expect=2e-07]} {Smed: dd_Smed_v6_14355_0_1, dd_Smed_v6_14355_0_1, [Score=104, Expect=2e-24]} {RNA1509_14151} {RNA1310_17181} {RNA815_7262}
3. MligTC455_16203 30 0.63 Mlig455_025342, Mlig455_025391

Neo: -

Age: -

 VAX1 2.617 - - - 0.805 0.991 0.821

Mlig455_025342 {REF} {Length: 1864} {Pfam: Homeodomain [PF00046.31, score=79.6]; Homeobox KN domain [PF05920.13, score=19.0]} {Human: ENSG00000148704, VAX1, ventral anterior homeobox 1, [RH, Score=134, Expect=2e-38]} {Mouse: ENSMUSG00000006270, Vax1, ventral anterior homeobox 1, [RH, Score=134, Expect=1e-38]} {Dmel: FBgn0008646, E5, [Score=89.7, Expect=2e-21]} {Celegans: WBGene00000430, ceh-5, Homeobox protein ceh-5, [RH, Score=94.4, Expect=2e-25]} {Smed: dd_Smed_v6_56082_0_1, dd_Smed_v6_56082_0_1, [Score=79.0, Expect=5e-19]} {RNA1310_103668} {RNA815_54191}

Mlig455_025391 {REF} {Length: 2433} {Pfam: Homeodomain [PF00046.31, score=77.1]} {Human: ENSG00000148704, VAX1, ventral anterior homeobox 1, [RH, Score=135, Expect=2e-35]} {Mouse: ENSMUSG00000006270, Vax1, ventral anterior homeobox 1, [RH, Score=135, Expect=2e-35]} {Dmel: FBgn0008646, E5, [Score=90.1, Expect=6e-19]} {Celegans: WBGene00000430, ceh-5, Homeobox protein ceh-5, [Score=88.6, Expect=8e-21]} {Smed: dd_Smed_v6_56082_0_1, dd_Smed_v6_56082_0_1, [Score=79.0, Expect=5e-17]} {RNA1509_50200} {RNA1310_103668} {RNA815_54191}
4. MligTC455_25500 430 8.95 Mlig455_001297

Neo: Irradiation

Age: -

Region-specific R4: 4.142

Region-enriched R4: 2.711/0.00000

Regeneration-downregulated R4: -2.439

Regeneration-depleted R4: -2.439

 TMLHE 2.608 0.758 - - - 0.892 0.958 Mlig455_001297 {REF} {Length: 3334} {Pfam: Taurine catabolism dioxygenase TauD, TfdA family [PF02668.18, score=124.3]; Gamma-butyrobetaine hydroxylase-like, N-terminal [PF06155.14, score=43.6]; CsiD [PF08943.12, score=17.8]} {Human: ENSG00000185973, TMLHE, trimethyllysine hydroxylase, epsilon, [RH, Score=227, Expect=1e-69]} {Mouse: ENSMUSG00000079834, Tmlhe, trimethyllysine hydroxylase, epsilon, [RH, Score=231, Expect=2e-71]} {Dmel: FBgn0038795, CG4335, [RH, Score=204, Expect=1e-61]} {Celegans: WBGene00001523, gbh-2, Gamma Butyrobetaine Hydroxylase, [RH, Score=213, Expect=6e-65]} {Smed: dd_Smed_v6_42907_0_1, dd_Smed_v6_42907_0_1, [Score=67.4, Expect=2e-12]} {RNA1509_12175, RNA1509_35235, RNA1509_41370, RNA1509_60153} {RNA1310_21502.1, RNA1509_12175, RNA1509_35235, RNA1509_41370, RNA1509_60153} {RNA1509_12175, RNA1509_35235, RNA1509_41370, RNA1509_60153, RNA815_25291}
5. MligTC455_16293 241 5.01 Mlig455_029235

Neo: Irradiation

Age: Up-Down-Down

 2.529 - 0.822 - 0.748 0.959 - Mlig455_029235 {REF} {Length: 1804} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=61.3]} {Smed: dd_Smed_v6_14355_0_1, dd_Smed_v6_14355_0_1, [Score=81.3, Expect=8e-17]} {RNA1509_14151} {RNA1310_17181} {RNA815_7262}
6. MligTC455_03734 28 0.58 Mlig455_006090

Neo: -

Age: -

 2.51 - 0.815 0.707 - 0.988 - Mlig455_006090 {REF} {Length: 1406} {Pfam: Methyltransferase domain [PF13383.8, score=64.8]; Methyltransferase FkbM domain [PF05050.14, score=39.6]} {Smed: dd_Smed_v6_3811_0_2, dd_Smed_v6_3811_0_2, [Score=172, Expect=8e-51]} {RNA1310_105941}
7. MligTC455_44126 14 0.28 Mlig455_055378

Neo: -

Age: Down-Up-Down

 TTLL13P 1.842 - 0.862 - - 0.980 - Mlig455_055378 {REF} {Length: 3061} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=269.8]; YheC/D like ATP-grasp [PF14398.8, score=24.7]; Sugar-transfer associated ATP-grasp [PF14397.8, score=20.6]} {Human: ENSG00000213471, TTLL13P, tubulin tyrosine ligase like 13, pseudogene, [RH, Score=564, Expect=0.0]} {Mouse: ENSMUSG00000045467, Ttll13, tubulin tyrosine ligase-like family, member 13, [RH, Score=580, Expect=0.0]} {Dmel: FBgn0039501, CG5987, [Score=444, Expect=1e-143]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=206, Expect=2e-56]} {Smed: dd_Smed_v6_8131_0_1, dd_Smed_v6_8131_0_1, [Score=679, Expect=0.0]} {RNA1509_17118} {RNA1310_6646.1} {RNA815_17546}
8. MligTC455_44011 149 3.11 Mlig455_018977

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.381

Region-enriched R4: 3.309/0.04341

 1.825 - 0.870 - - 0.955 - Mlig455_018977 {REF} {Length: 1398} {RNA1509_51989} {RNA1310_26186.1, RNA1509_51989} {RNA1509_51989, RNA815_21629}
9. MligTC455_04824 23 0.49 Mlig455_059470

Neo: -

Age: -

Region-enriched R8: 6.548/0.01820
Region-enriched R7: 5.424/0.01867

 1.823 - 0.861 - - 0.962 - Mlig455_059470 {REF} {Length: 674} {RNA1509_34011} {RNA1310_73489} {RNA815_44499}
10. MligTC455_23039 94 1.97 Mlig455_034102

Neo: Irradiation

Age: Up-Down-Up

Region-enriched R8: 4.364/0.01868

 PKDREJ 1.792 - 0.840 - - 0.952 - Mlig455_034102 {REF} {Length: 7975} {Pfam: Polycystin cation channel [PF08016.14, score=156.8]; Ion transport protein [PF00520.33, score=37.1]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=104, Expect=5e-22]; ENSG00000107593, PKD2L1, polycystin 2 like 1, transient receptor potential cation channel, [Score=101, Expect=3e-21]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=142, Expect=7e-34]} {Dmel: FBgn0036712, brv2, brivido-2, [Score=58.2, Expect=3e-08]} {Smed: dd_Smed_v6_12955_0_1, dd_Smed_v6_12955_0_1, [Score=127, Expect=6e-30]} {RNA1509_58618} {RNA1310_1849} {RNA815_2535}
11. MligTC455_29491 238 4.96 Mlig455_069524

Neo: Irradiation

Age: Up-Up-Down, logFC(26M/2M)=0.351

 1.79 - 0.816 - - 0.974 - Mlig455_069524 {REF} {Length: 3130} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.6]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=22.8]; Capsular polysaccharide synthesis protein [PF05704.14, score=22.3]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [Score=109, Expect=2e-27]} {RNA1509_17162, RNA1509_41197, RNA1509_54683} {RNA1310_12293.2, RNA1509_17162, RNA1509_41197, RNA1509_54683} {RNA1509_17162, RNA1509_41197, RNA1509_54683, RNA815_9107.2}
12. MligTC455_29489 117 2.44 Mlig455_018379

Neo: Irradiation

Age: Up-Down-Up, logFC(26M/2M)=-0.551

 1.782 - 0.832 - - 0.950 - Mlig455_018379 {REF} {Length: 3107} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.6]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=22.8]; Capsular polysaccharide synthesis protein [PF05704.14, score=22.2]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [Score=109, Expect=2e-27]} {RNA1509_59696} {RNA1310_12293.2, RNA1509_59696} {RNA1509_59696, RNA815_9107.2}
13. MligTC455_49670 33 0.68 Mlig455_047674

Neo: Int S/G2/M

Age: -

Region-enriched R2: 4.520/0.04813
Region-enriched R4: 3.300/0.03683

 WSCD2 1.773 - - - 0.809 0.964 - Mlig455_047674 {REF} {Length: 875} {Pfam: WSC domain [PF01822.21, score=55.1]; PAN domain [PF00024.28, score=19.2]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=53.1, Expect=9e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=52.8, Expect=9e-08]} {RNA1509_29094} {RNA1310_84271.1} {RNA815_51632}
14. MligTC455_12812 58 1.21 Mlig455_027688, Mlig455_047749

Neo: -

Age: Up-Down-Down

 1.762 - - - - 0.957 0.805

Mlig455_027688 {REF} {Length: 2289} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=18.6]} {RNA1509_59038} {RNA1310_64936.1, RNA1509_59038}

Mlig455_047749 {REF} {Length: 2332} {RNA1509_59038} {RNA1310_67234}
15. MligTC455_13426 23 0.47 Mlig455_016859

Neo: -

Age: -

 TXN 1.761 - 0.793 - - - 0.968 Mlig455_016859 {REF} {Length: 1027} {Pfam: Thioredoxin [PF00085.22, score=66.3]; Thioredoxin [PF14595.8, score=24.1]; Thioredoxin-like [PF13905.8, score=22.4]; Thioredoxin-like domain [PF13098.8, score=19.5]; Hydrogenase-1 expression protein HyaE [PF07449.13, score=19.0]} {Human: ENSG00000136810, TXN, thioredoxin, [Score=67.0, Expect=7e-14]} {Mouse: ENSMUSG00000028367, Txn1, thioredoxin 1, [Score=62.8, Expect=2e-12]} {Dmel: FBgn0029752, TrxT, Thioredoxin T, [Score=66.6, Expect=1e-13]} {Celegans: WBGene00010160, png-1, Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, [Score=61.6, Expect=6e-11]} {RNA1509_27175} {RNA1310_32921} {RNA815_20357}
16. MligTC455_05557 49 1.02 Mlig455_054327

Neo: -

Age: -

Region-enriched R4: 4.473/0.00273

 1.758 - 0.791 - - 0.967 - Mlig455_054327 {REF} {Length: 519} {NoTransDecoderORF} {RNA1509_38197} {RNA1310_90831} {RNA815_43533}
17. MligTC455_45203 53 1.1 Mlig455_010181

Neo: Germline

Age: Down-Up-Down

 1.749 - 0.779 - - 0.970 - Mlig455_010181 {REF} {Length: 1154} {RNA1509_48085} {RNA1310_40804, RNA1509_48085} {RNA1509_48085, RNA815_27336}
18. MligTC455_10617 423 8.82 Mlig455_023363, Mlig455_068941

Neo: Irradiation

Age: -

Region-specific R4: 6.593

Region-enriched R4: 3.320/0.01596

 1.717 0.766 - - - 0.951 -

Mlig455_023363 {REF} {Length: 1045} {NoTransDecoderORF} {RNA1509_20691} {RNA1310_36665} {RNA815_17209}

Mlig455_068941 {REF} {Length: 1045} {NoTransDecoderORF} {RNA1509_20691} {RNA1310_36665} {RNA815_17209}
19. MligTC455_47531 766 15.96 Mlig455_010404

Neo: -

Age: Down-Down-Up

Region-enriched R2: 2.453/0.00086
Region-enriched R3: 1.745/0.03880

 1.704 - - - 0.953 0.751 - Mlig455_010404 {REF} {Length: 2728} {RNA1509_28525} {RNA1310_16828, RNA1509_28525} {RNA1509_28525, RNA815_10712}
20. MligTC455_31667 14 0.3 Mlig455_047051

Neo: -

Age: Down-Down-Down

 1.664 - 0.703 - - 0.961 - Mlig455_047051 {REF} {Length: 3464} {RNA1509_2515} {RNA1310_28603.1} {RNA815_3258.1}
21. MligTC455_18322 82 1.71 Mlig455_021228

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.636

 1.656 - - - 0.701 0.955 - Mlig455_021228 {REF} {Length: 3954} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=26.3]} {Smed: dd_Smed_v6_11972_0_1, dd_Smed_v6_11972_0_1, [RH, Score=229, Expect=2e-64]} {RNA1509_9124} {RNA1310_5268.1, RNA1509_9124} {RNA1509_9124, RNA815_1717.1}
22. MligTC455_06426 14 0.3 Mlig455_045703

Neo: -

Age: -

 0.983 - - - - 0.983 - Mlig455_045703 {REF} {Length: 756} {NoTransDecoderORF} {RNA1310_88574} {RNA815_52979}
23. MligTC455_46637 18 0.37 Mlig455_010742

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R2: 6.787/0.03510

 LMX1B 0.983 - - - - 0.983 - Mlig455_010742 {REF} {Length: 2975} {Pfam: LIM domain [PF00412.24, score=101.8]; Homeodomain [PF00046.31, score=64.1]; Homeobox KN domain [PF05920.13, score=27.5]; Auxin canalisation [PF05703.13, score=20.5]} {Human: ENSG00000136944, LMX1B, LIM homeobox transcription factor 1 beta, [RH, Score=241, Expect=3e-76]; ENSG00000162761, LMX1A, LIM homeobox transcription factor 1 alpha, [RH, Score=238, Expect=3e-75]} {Mouse: ENSMUSG00000038765, Lmx1b, LIM homeobox transcription factor 1 beta, [RH, Score=241, Expect=2e-76]; ENSMUSG00000026686, Lmx1a, LIM homeobox transcription factor 1 alpha, [RH, Score=233, Expect=2e-73]} {Dmel: FBgn0052105, Lmx1a, LIM homeobox transcription factor 1 alpha, [RH, Score=236, Expect=7e-72]} {Celegans: WBGene00002988, lim-6, LIM domain family, [Score=182, Expect=1e-54]} {Smed: dd_Smed_v6_13371_0_1, dd_Smed_v6_13371_0_1, [RH, Score=171, Expect=2e-49]} {RNA1509_10207} {RNA1310_5646.2} {RNA815_25330}
24. MligTC455_18534 164 3.42 Mlig455_013039

Neo: -

Age: -

 CD163L1 0.979 - - - 0.979 - - Mlig455_013039 {REF} {Length: 1954} {Pfam: Scavenger receptor cysteine-rich domain [PF00530.20, score=87.2]; Scavenger receptor cysteine-rich domain [PF15494.8, score=29.1]} {Human: ENSG00000177675, CD163L1, CD163 molecule like 1, [Score=96.3, Expect=1e-21]} {Mouse: ENSMUSG00000047517, Dmbt1, deleted in malignant brain tumors 1, [Score=80.1, Expect=2e-16]; ENSMUSG00000006204, 5430419D17Rik, RIKEN cDNA 5430419D17 gene, [Score=79.0, Expect=5e-16]; ENSMUSG00000027978, Prss12, protease, serine 12 neurotrypsin (motopsin), [Score=78.6, Expect=6e-16]; ENSMUSG00000025185, Loxl4, lysyl oxidase-like 4, [Score=78.2, Expect=9e-16]; ENSMUSG00000029699, Ssc4d, scavenger receptor cysteine rich family, 4 domains, [Score=76.3, Expect=4e-15]} {Dmel: FBgn0034660, lox2, lysyl oxidase-like 2, [Score=89.4, Expect=9e-20]} {Smed: dd_Smed_v6_10591_0_1, dd_Smed_v6_10591_0_1, [Score=89.7, Expect=4e-20]} {RNA1509_21249} {RNA1310_15268.1} {RNA815_5714}
25. MligTC455_42507 6 0.13 Mlig455_003287

Neo: -

Age: -

 0.978 - - - - 0.978 - Mlig455_003287 {REF} {Length: 1202} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=73.6]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=48.1, Expect=7e-06]}
26. MligTC455_26993 13 0.28 Mlig455_056312

Neo: -

Age: -

 ZMYM1 0.977 - - - - 0.977 - Mlig455_056312 {REF} {Length: 2369} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=50.8]} {Human: ENSG00000197056, ZMYM1, zinc finger MYM-type containing 1, [Score=50.1, Expect=6e-07]} {Mouse: ENSMUSG00000043872, Zmym1, zinc finger, MYM domain containing 1, [Score=49.7, Expect=5e-07]} {Smed: dd_Smed_v6_13305_1_1, dd_Smed_v6_13305_1_1, [Score=79.7, Expect=6e-18]} {RNA1509_17407} {RNA1310_2113} {RNA815_4403}
27. MligTC455_26392 64 1.33 Mlig455_001758

Neo: -

Age: -

Region-enriched R4: 4.334/0.04740

 PLD1 0.976 - - - - 0.976 - Mlig455_001758 {REF} {Length: 4484} {Pfam: PLD-like domain [PF13091.8, score=36.1]; Phospholipase D Active site motif [PF00614.24, score=31.9]} {Human: ENSG00000075651, PLD1, phospholipase D1, [RH, Score=290, Expect=1e-86]} {Mouse: ENSMUSG00000027695, Pld1, phospholipase D1, [RH, Score=296, Expect=7e-89]} {Dmel: FBgn0033075, Pld, Phospholipase D, [RH, Score=241, Expect=1e-68]} {Celegans: WBGene00004040, pld-1, PhosphoLipase D; Phospholipase D, [RH, Score=248, Expect=9e-71]} {Smed: dd_Smed_v6_61149_0_1, dd_Smed_v6_61149_0_1, [RH, Score=247, Expect=2e-76]} {RNA1509_57028} {RNA1310_1982, RNA1509_57028} {RNA1509_57028, RNA815_17806}
28. MligTC455_07894 82 1.71 Mlig455_069229

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_069229 {REF} {Length: 281} {NoTransDecoderORF} {RNA1509_11387} {RNA1310_98146} {RNA815_3258.3}
29. MligTC455_30679 25 0.52 Mlig455_019397, Mlig455_056063, Mlig455_061587

Neo: -

Age: -

Region-enriched R4: 1.545/0.03801

 NYNRIN 0.972 - - - - 0.972 -

Mlig455_019397 {REF} {Length: 1298} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=38.6]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=88.6, Expect=3e-19]} {RNA1509_29748} {RNA1310_1140.1} {RNA815_993.1}

Mlig455_056063 {REF} {Length: 4562} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=69.9]; Integrase zinc binding domain [PF17921.3, score=66.8]; Integrase core domain [PF00665.28, score=50.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.3]; Aspartyl protease [PF13650.8, score=28.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=95.5, Expect=5e-19]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=99.8, Expect=2e-20]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=447, Expect=3e-137]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1}

Mlig455_061587 {REF} {Length: 3872} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=120.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.0]; Integrase zinc binding domain [PF17921.3, score=67.0]; Integrase core domain [PF00665.28, score=50.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.4]; Aspartyl protease [PF13650.8, score=28.3]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=96.7, Expect=2e-19]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=100, Expect=8e-21]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=446, Expect=1e-137]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1}
30. MligTC455_15565 122 2.54 Mlig455_054610, Mlig455_060123

Neo: -

Age: -

 0.971 - - - - 0.971 -

Mlig455_054610 {REF} {Length: 609} {NoTransDecoderORF} {RNA1310_55174} {RNA815_12298}

Mlig455_060123 {REF} {Length: 624} {NoTransDecoderORF} {RNA1310_55174} {RNA815_12298}
31. MligTC455_07828 23 0.48 Mlig455_006234, Mlig455_006295

Neo: -

Age: -

 KCNIP4 0.969 - - - - 0.969 -

Mlig455_006234 {REF} {Length: 2640} {Pfam: EF-hand domain pair [PF13499.8, score=42.8]; EF hand [PF00036.34, score=34.6]; EF-hand domain [PF13405.8, score=30.8]; EF-hand domain pair [PF13833.8, score=22.5]; EF hand [PF13202.8, score=22.3]} {Human: ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=126, Expect=2e-33]} {Mouse: ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=126, Expect=1e-33]} {Dmel: FBgn0265595, CG44422, [Score=117, Expect=3e-29]} {Celegans: WBGene00003565, ncs-3, Neuronal Calcium Sensor family, [Score=103, Expect=2e-25]} {Smed: dd_Smed_v6_9727_0_1, dd_Smed_v6_9727_0_1, [Score=116, Expect=5e-30]} {RNA1310_69087} {RNA815_35381}

Mlig455_006295 {REF} {Length: 1955} {Pfam: EF-hand domain pair [PF13499.8, score=21.4]; EF-hand domain pair [PF13833.8, score=20.9]; EF hand [PF00036.34, score=20.8]} {Dmel: FBgn0083228, Frq2, Frequenin 2, [Score=53.1, Expect=4e-09]} {RNA1310_69087} {RNA815_35381}
32. MligTC455_08618 16 0.33 Mlig455_067561

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_067561 {REF} {Length: 675} {Pfam: Integrase zinc binding domain [PF17921.3, score=45.4]; H2C2 zinc finger [PF09337.12, score=18.8]} {Smed: dd_Smed_v6_18260_0_1, dd_Smed_v6_18260_0_1, [RH, Score=42.7, Expect=9e-06]}
33. MligTC455_51181 17 0.35 Mlig455_066569

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_066569 {REF} {Length: 1674} {Pfam: RUN domain [PF02759.21, score=48.7]} {RNA1509_18736} {RNA1310_14745} {RNA815_5188}
34. MligTC455_29869 570 11.88 Mlig455_052401, Mlig455_052417

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.165/0.04855

 0.966 - - - - - 0.966

Mlig455_052401 {REF} {Length: 2507} {Pfam: DC-STAMP-like protein [PF07782.15, score=20.6]} {RNA1509_7769} {RNA1310_8163} {RNA815_5010}

Mlig455_052417 {REF} {Length: 2165} {Pfam: DC-STAMP-like protein [PF07782.15, score=57.7]} {RNA1509_45832, RNA1509_7769} {RNA1310_6244.1, RNA1509_45832} {RNA1509_45832, RNA815_5010}
35. MligTC455_40352 49 1.03 Mlig455_024410

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_024410 {REF} {Length: 1509} {TRANSSPLICED} {RNA1310_29008} {RNA815_41596}
36. MligTC455_21435 37 0.77 Mlig455_016499

Neo: -

Age: -

 RTL1 0.965 - - - - 0.965 - Mlig455_016499 {REF} {Length: 4412} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=88.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=109, Expect=7e-24]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=278, Expect=5e-84]} {RNA1509_56816} {RNA1310_8523, RNA1509_56816}
37. MligTC455_08021 293 6.1 Mlig455_038321, Mlig455_050216

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.467

 0.964 - - - 0.964 - -

Mlig455_038321 {REF} {Length: 3145} {RNA1509_37284} {RNA1310_20751} {RNA815_26670}

Mlig455_050216 {REF} {Length: 2542} {RNA1509_37284} {RNA1310_20751} {RNA815_41422}
38. MligTC455_06089 26 0.54 Mlig455_037648

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.770

 0.963 - - - - 0.963 - Mlig455_037648 {REF} {Length: 2465} {Pfam: Otopetrin [PF03189.15, score=27.4]} {RNA1509_10108} {RNA1310_12138.2} {RNA815_2847.1}
39. MligTC455_19322 47 0.98 Mlig455_060292

Neo: -

Age: -

Region-enriched R5: 4.828/0.04092

 0.963 - - - - 0.963 - Mlig455_060292 {REF} {Length: 1265} {RNA1310_61465} {RNA815_19768}
40. MligTC455_04154 8 0.16 Mlig455_065272

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_065272 {REF} {Length: 2413} {RNA1509_33387} {RNA1310_38614} {RNA815_2054.1}
41. MligTC455_09107 11 0.24 Mlig455_059945

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_059945 {REF} {Length: 465} {NoTransDecoderORF} {RNA1509_58333} {RNA1310_141885} {RNA815_39121}
42. MligTC455_09307 8 0.16 Mlig455_043212

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_043212 {REF} {Length: 373} {Pfam: NHL repeat [PF01436.23, score=23.2]} {RNA1509_15622} {RNA1310_37306} {RNA815_3900.8}
43. MligTC455_17029 11 0.23 Mlig455_048813

Neo: -

Age: logFC(26M/2M)=-0.322

 MBNL2 0.962 - - - - 0.962 - Mlig455_048813 {REF} {Length: 3646} {Human: ENSG00000139793, MBNL2, muscleblind like splicing regulator 2, [RH, Score=135, Expect=4e-36]; ENSG00000076770, MBNL3, muscleblind like splicing regulator 3, [RH, Score=133, Expect=8e-36]; ENSG00000152601, MBNL1, muscleblind like splicing regulator 1, [RH, Score=131, Expect=1e-34]} {Mouse: ENSMUSG00000022139, Mbnl2, muscleblind like splicing factor 2, [RH, Score=135, Expect=2e-36]; ENSMUSG00000036109, Mbnl3, muscleblind like splicing factor 3, [RH, Score=135, Expect=1e-36]} {Dmel: FBgn0265487, mbl, muscleblind, [Score=150, Expect=8e-44]} {Celegans: WBGene00019347, mbl-1, Muscleblind-like protein, [RH, Score=146, Expect=4e-41]} {Smed: dd_Smed_v6_7489_0_2, dd_Smed_v6_7489_0_2, [RH, Score=164, Expect=7e-47]} {RNA1509_23214} {RNA1310_25976} {RNA815_17782}
44. MligTC455_29241 6 0.13 Mlig455_002458, Mlig455_002703

Neo: -

Age: -

 TUBGCP3 0.962 - - - - 0.962 -

Mlig455_002458 {REF} {Length: 2568} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=266.8]; Gamma tubulin complex component C-terminal [PF04130.15, score=228.0]} {Human: ENSG00000126216, TUBGCP3, tubulin gamma complex associated protein 3, [RH, Score=562, Expect=0.0]} {Mouse: ENSMUSG00000000759, Tubgcp3, tubulin, gamma complex associated protein 3, [Score=566, Expect=0.0]} {Dmel: FBgn0001612, Grip91, Gamma-tubulin ring protein 91, [Score=340, Expect=5e-103]} {Smed: dd_Smed_v6_9688_0_1, dd_Smed_v6_9688_0_1, [Score=380, Expect=3e-119]} {RNA1509_5764} {RNA1310_394.3} {RNA815_906}

Mlig455_002703 {REF} {Length: 2537} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=266.8]; Gamma tubulin complex component C-terminal [PF04130.15, score=227.6]} {Human: ENSG00000126216, TUBGCP3, tubulin gamma complex associated protein 3, [RH, Score=562, Expect=0.0]} {Mouse: ENSMUSG00000000759, Tubgcp3, tubulin, gamma complex associated protein 3, [Score=565, Expect=0.0]} {Dmel: FBgn0001612, Grip91, Gamma-tubulin ring protein 91, [Score=337, Expect=3e-102]} {Smed: dd_Smed_v6_9688_0_1, dd_Smed_v6_9688_0_1, [Score=378, Expect=2e-118]} {RNA1509_5764} {RNA1310_394.3} {RNA815_906}
45. MligTC455_35250 61 1.26 Mlig455_000731

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_000731 {REF} {Length: 2188} {Celegans: WBGene00015646, mlt-10, [Score=168, Expect=5e-47]} {RNA1509_6125} {RNA1310_26090} {RNA815_7336}
46. MligTC455_37303 21 0.43 Mlig455_020171

Neo: -

Age: -

 ZNF197 0.962 - - - - 0.962 - Mlig455_020171 {REF} {Length: 1573} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=60.3]; C2H2-type zinc finger [PF13894.8, score=49.1]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=26.5]; C2H2-type zinc finger [PF13912.8, score=22.1]; Transcription elongation factor Elf1 like [PF05129.15, score=19.6]} {Human: ENSG00000186448, ZNF197, zinc finger protein 197, [Score=67.0, Expect=6e-12]; ENSG00000281709, ZNF197, zinc finger protein 197, [Score=67.0, Expect=6e-12]; ENSG00000170631, ZNF16, zinc finger protein 16, [Score=67.0, Expect=5e-12]; ENSG00000131849, ZNF132, zinc finger protein 132, [Score=66.2, Expect=9e-12]; ENSG00000131845, ZNF304, zinc finger protein 304, [Score=64.3, Expect=4e-11]; ENSG00000196387, ZNF140, zinc finger protein 140, [Score=63.9, Expect=4e-11]} {Mouse: ENSMUSG00000023284, Zfp605, zinc finger protein 605, [Score=63.9, Expect=3e-11]; ENSMUSG00000079215, Zfp664, zinc finger protein 664, [Score=60.8, Expect=1e-10]} {Dmel: FBgn0020309, crol, crooked legs, [Score=61.2, Expect=2e-10]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=49.3, Expect=6e-07]} {Smed: dd_Smed_v6_26394_0_1, dd_Smed_v6_26394_0_1, [Score=49.3, Expect=5e-07]} {RNA1509_27079} {RNA1310_59040.1} {RNA815_26301}
47. MligTC455_38670 7 0.15 Mlig455_006879

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_006879 {REF} {Length: 795} {RNA1509_50839} {RNA1310_131129} {RNA815_18706.1}
48. MligTC455_37801 27 0.57 Mlig455_023157

Neo: -

Age: Down-Up-Down

 0.961 - - - - 0.961 - Mlig455_023157 {REF} {Length: 3565} {RNA1509_34317} {RNA1310_1951.1} {RNA815_30155}
49. MligTC455_04214 13 0.27 Mlig455_022345

Neo: -

Age: -

 HCN4 0.96 - - - - 0.960 - Mlig455_022345 {REF} {Length: 4342} {Pfam: Ion transport protein N-terminal [PF08412.12, score=85.6]; Ion transport protein [PF00520.33, score=81.4]} {Human: ENSG00000138622, HCN4, hyperpolarization activated cyclic nucleotide gated potassium channel 4, [Score=517, Expect=7e-169]; ENSG00000164588, HCN1, hyperpolarization activated cyclic nucleotide gated potassium channel 1, [Score=504, Expect=1e-167]; ENSG00000099822, HCN2, hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2, [Score=498, Expect=4e-165]; ENSG00000263324, HCN3, hyperpolarization activated cyclic nucleotide gated potassium channel 3, [Score=492, Expect=3e-164]; ENSG00000143630, HCN3, hyperpolarization activated cyclic nucleotide gated potassium channel 3, [Score=492, Expect=3e-164]} {Mouse: ENSMUSG00000032338, Hcn4, hyperpolarization-activated, cyclic nucleotide-gated K+ 4, [Score=510, Expect=2e-166]; ENSMUSG00000021730, Hcn1, hyperpolarization-activated, cyclic nucleotide-gated K+ 1, [Score=506, Expect=5e-168]; ENSMUSG00000020331, Hcn2, hyperpolarization-activated, cyclic nucleotide-gated K+ 2, [Score=500, Expect=2e-166]; ENSMUSG00000028051, Hcn3, hyperpolarization-activated, cyclic nucleotide-gated K+ 3, [Score=494, Expect=2e-165]} {Dmel: FBgn0263397, Ih, I[[h]] channel, [Score=611, Expect=0.0]} {Celegans: WBGene00006526, tax-4, Cyclic nucleotide-gated cation channel, [Score=110, Expect=6e-25]} {Smed: dd_Smed_v6_13408_0_1, dd_Smed_v6_13408_0_1, [Score=741, Expect=0.0]} {RNA1509_8719} {RNA1310_25014} {RNA815_22259}
50. MligTC455_33495 28 0.58 Mlig455_047292, Mlig455_047342, Mlig455_069323

Neo: -

Age: -

 LHFPL2 0.96 - - - - 0.960 -

Mlig455_047292 {REF} {Length: 1105} {RNA1310_118047}

Mlig455_047342 {REF} {Length: 1735} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=104.8]; PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=30.7]} {Human: ENSG00000145685, LHFPL2, LHFPL tetraspan subfamily member 2, [Score=47.8, Expect=1e-05]} {Mouse: ENSMUSG00000045312, Lhfpl2, lipoma HMGIC fusion partner-like 2, [Score=47.0, Expect=1e-05]} {Smed: dd_Smed_v6_9373_0_1, dd_Smed_v6_9373_0_1, [Score=175, Expect=1e-51]} {RNA1509_30020} {RNA1310_118047} {RNA815_5159.1}

Mlig455_069323 {REF} {Length: 886} {RNA1310_118047}
51. MligTC455_40304 59 1.23 Mlig455_069110

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=1.283

 0.96 - - - - 0.960 - Mlig455_069110 {REF} {Length: 2324} {TRANSSPLICED} {RNA1509_20630} {RNA1310_25667} {RNA815_12276}
52. MligTC455_14697 10 0.21 Mlig455_045505

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_045505 {REF} {Length: 658} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=27.6]} {RNA1509_45868} {RNA1310_53876} {RNA815_13104.1}
53. MligTC455_42736 407 8.48 Mlig455_003009, Mlig455_036418, Mlig455_054591

Neo: -

Age: -

 0.958 - - - - 0.958 -

Mlig455_003009 {REF} {Length: 2844} {RNA1509_52803} {RNA1310_21149.1, RNA1509_52803} {RNA1509_52803, RNA815_36125.1}

Mlig455_036418 {REF} {Length: 1808} {RNA1509_52803} {RNA1310_21149.1} {RNA815_36125.1}

Mlig455_054591 {REF} {Length: 1603} {RNA1509_52803} {RNA1310_21149.1} {RNA815_36125.1}
54. MligTC455_05081 10 0.2 Mlig455_004977

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_004977 {REF} {Length: 769} {NoTransDecoderORF} {RNA1310_99788} {RNA815_6347.1}
55. MligTC455_14955 12 0.25 Mlig455_058159

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_058159 {REF} {Length: 510} {NoTransDecoderORF} {RNA1310_122094}
56. MligTC455_18258 406 8.45 Mlig455_028823

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_028823 {REF} {Length: 5290} {TRANSSPLICED} {Pfam: Neuralized [PF07177.14, score=84.3]; C-terminal of Roc, COR, domain [PF16095.7, score=81.1]; TIR domain [PF13676.8, score=69.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=39.7]; Death domain [PF00531.24, score=32.7]} {Mouse: ENSMUSG00000047180, Neurl3, neuralized E3 ubiquitin protein ligase 3, [RH, Score=58.5, Expect=1e-08]} {Smed: dd_Smed_v6_6002_0_1, dd_Smed_v6_6002_0_1, [RH, Score=318, Expect=8e-90]} {RNA1509_12960, RNA1509_39690} {RNA1310_3368.1, RNA1509_12960, RNA1509_39690} {RNA1509_12960, RNA1509_39690, RNA815_1587}
57. MligTC455_28518 184 3.84 Mlig455_068682

Neo: -

Age: Down-Down-Up

 ANKRD50 0.957 - - - - 0.957 - Mlig455_068682 {REF} {Length: 5526} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=230.6]; Ankyrin repeats (many copies) [PF13637.8, score=137.6]; Ankyrin repeat [PF00023.32, score=109.8]; Ankyrin repeats (many copies) [PF13857.8, score=106.4]; Ankyrin repeat [PF13606.8, score=102.1]; Mab-21 protein [PF03281.16, score=30.7]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=158, Expect=1e-38]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=157, Expect=2e-38]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=135, Expect=8e-33]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=134, Expect=1e-31]} {Smed: dd_Smed_v6_6201_0_1, dd_Smed_v6_6201_0_1, [Score=140, Expect=6e-34]} {RNA1509_18101} {RNA1310_3035.1, RNA1509_18101} {RNA1509_18101, RNA815_4096}
58. MligTC455_19323 26 0.54 Mlig455_065634

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_065634 {REF} {Length: 1335} {RNA1310_46115} {RNA815_19768}
59. MligTC455_35732 33 0.68 Mlig455_068717

Neo: -

Age: -

 WSCD2 0.956 - - - - 0.956 - Mlig455_068717 {REF} {Length: 1118} {Pfam: WSC domain [PF01822.21, score=44.7]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=53.9, Expect=4e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=49.7, Expect=8e-07]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=57.8, Expect=1e-09]} {RNA1310_109959}
60. MligTC455_35894 23 0.48 Mlig455_029906

Neo: -

Age: -

 RYK 0.956 - - - - 0.956 - Mlig455_029906 {REF} {Length: 3571} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=210.1]; WIF domain [PF02019.20, score=110.2]; Protein kinase domain [PF00069.27, score=79.8]} {Human: ENSG00000163785, RYK, receptor-like tyrosine kinase, [Score=202, Expect=7e-57]} {Mouse: ENSMUSG00000032547, Ryk, receptor-like tyrosine kinase, [Score=202, Expect=9e-57]} {Dmel: FBgn0015380, drl, derailed, [RH, Score=241, Expect=7e-71]} {Celegans: WBGene00003007, lin-18, Inactive tyrosine-protein kinase RYK, [RH, Score=179, Expect=9e-49]} {Smed: dd_Smed_v6_12594_0_3, dd_Smed_v6_12594_0_3, [Score=201, Expect=2e-56]} {RNA1509_58811} {RNA1310_6671.2, RNA1509_58811} {RNA1509_58811, RNA815_41921}
61. MligTC455_24864 45 0.94 Mlig455_036650, Mlig455_036676

Neo: Germline

Age: -

 0.955 - - - - 0.955 -

Mlig455_036650 {REF} {Length: 7160} {RNA1310_56607}

Mlig455_036676 {REF} {Length: 4934} {RNA1509_25556} {RNA1310_56607} {RNA815_49065}
62. MligTC455_30359 25 0.52 Mlig455_034159, Mlig455_040388, Mlig455_040395

Neo: -

Age: -

 ANK1, ANK2 0.955 - - - - 0.955 -

Mlig455_034159 {REF} {Length: 4637} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=167.8]; Ankyrin repeats (3 copies) [PF12796.9, score=163.2]; Ankyrin repeats (many copies) [PF13857.8, score=136.7]; Ankyrin repeat [PF13606.8, score=89.1]; Ankyrin repeat [PF00023.32, score=76.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=127, Expect=1e-29]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=117, Expect=5e-27]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=114, Expect=5e-26]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=114, Expect=1e-25]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=111, Expect=3e-25]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=97.1, Expect=1e-20]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=112, Expect=9e-26]} {RNA1509_14877} {RNA1310_782} {RNA815_17499.1}

Mlig455_040388 {REF} {Length: 4885} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=344.5]; Ankyrin repeats (many copies) [PF13637.8, score=308.8]; Ankyrin repeats (many copies) [PF13857.8, score=211.6]; Ankyrin repeat [PF13606.8, score=182.1]; Ankyrin repeat [PF00023.32, score=138.6]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=176, Expect=2e-44]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=174, Expect=7e-44]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=174, Expect=1e-43]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=144, Expect=7e-35]} {Smed: dd_Smed_v6_5303_0_1, dd_Smed_v6_5303_0_1, [Score=166, Expect=4e-42]} {RNA1310_90340}

Mlig455_040395 {REF} {Length: 3479} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=230.6]; Ankyrin repeats (many copies) [PF13637.8, score=193.2]; Ankyrin repeats (many copies) [PF13857.8, score=172.1]; Ankyrin repeat [PF00023.32, score=145.1]; Ankyrin repeat [PF13606.8, score=142.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=161, Expect=2e-40]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=160, Expect=4e-40]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=159, Expect=7e-40]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=150, Expect=2e-37]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=110, Expect=2e-24]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=169, Expect=1e-43]} {RNA1310_101625}
63. MligTC455_22851 17 0.35 Mlig455_032044, Mlig455_033467

Neo: Germline

Age: -

 0.954 - - - - 0.954 -

Mlig455_032044 {REF} {Length: 2628} {RNA1509_14849} {RNA1310_2829} {RNA815_37599}

Mlig455_033467 {REF} {Length: 709} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=88.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=85.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=61.2]; Integrase zinc binding domain [PF17921.3, score=46.3]; Integrase core domain [PF00665.28, score=31.5]; Zinc knuckle [PF00098.25, score=18.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=230, Expect=7e-62]} {RNA1509_14849} {RNA1310_1535} {RNA815_664}
64. MligTC455_25194 218 4.55 Mlig455_057371

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.674

Region-enriched R3: 1.742/0.04295

 KY 0.954 - - - 0.954 - - Mlig455_057371 {REF} {Length: 5685} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=80.1, Expect=1e-14]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=84.0, Expect=7e-16]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=82.8, Expect=1e-15]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=70.9, Expect=5e-12]} {Smed: dd_Smed_v6_1109_0_1, dd_Smed_v6_1109_0_1, [Score=95.9, Expect=9e-20]} {RNA1509_6021} {RNA1310_875.2} {RNA815_349}
65. MligTC455_48423 395 8.23 Mlig455_007853

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=2.690

Region-specific R4: 6.746

Region-enriched R4: 4.550/0.00006

Regeneration-downregulated R4: -3.409

Regeneration-depleted R4: -3.409

 0.954 - - - - - 0.954 Mlig455_007853 {REF} {Length: 968} {RNA1509_7268} {RNA1310_14845.2} {RNA815_6460}
66. MligTC455_02438 147 3.06 Mlig455_003956, Mlig455_027591, Mlig455_039496, Mlig455_054510

Neo: -

Age: Down-Up-Down

 PGBD4 0.953 - - - - 0.953 -

Mlig455_003956 {REF} {Length: 311} {NoTransDecoderORF} {RNA1509_37400} {RNA1310_2776}

Mlig455_027591 {REF} {Length: 409} {NoTransDecoderORF} {RNA1509_28307} {RNA1310_2776} {RNA815_4739}

Mlig455_039496 {REF} {Length: 2868} {Pfam: Transposase IS4 [PF13843.8, score=210.5]; Transposase DDE domain [PF01609.23, score=18.8]} {Human: ENSG00000182405, PGBD4, piggyBac transposable element derived 4, [Score=173, Expect=1e-46]} {Smed: dd_Smed_v6_48522_0_1, dd_Smed_v6_48522_0_1, [Score=108, Expect=1e-26]} {RNA1509_28307, RNA1509_37400} {RNA1310_2776, RNA1509_28307, RNA1509_37400} {RNA1509_28307, RNA1509_37400, RNA815_26100}

Mlig455_054510 {REF} {Length: 581} {NoTransDecoderORF} {RNA1509_28307} {RNA1310_2776} {RNA815_4739}
67. MligTC455_02468 7 0.15 Mlig455_058570

Neo: Irradiation

Age: -

 0.953 - - - - 0.953 - Mlig455_058570 {REF} {Length: 666} {NoTransDecoderORF} {RNA1509_25975} {RNA1310_29152} {RNA815_54870}
68. MligTC455_06768 12 0.25 Mlig455_009616

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_009616 {REF} {Length: 322} {NoTransDecoderORF}
69. MligTC455_17237 20 0.42 Mlig455_045097

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_045097 {REF} {Length: 1126} {NoTransDecoderORF} {RNA1310_82726} {RNA815_53241.1}
70. MligTC455_47838 4 0.07 Mlig455_045335

Neo: -

Age: -

 SLC8A1 0.953 - - - - 0.953 - Mlig455_045335 {REF} {Length: 3293} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=162.5]; Calx-beta domain [PF03160.16, score=108.0]} {Human: ENSG00000183023, SLC8A1, solute carrier family 8 member A1, [Score=426, Expect=1e-134]; ENSG00000100678, SLC8A3, solute carrier family 8 member A3, [Score=422, Expect=2e-133]} {Mouse: ENSMUSG00000079055, Slc8a3, solute carrier family 8 (sodium/calcium exchanger), member 3, [Score=424, Expect=5e-134]; ENSMUSG00000030376, Slc8a2, solute carrier family 8 (sodium/calcium exchanger), member 2, [Score=416, Expect=3e-131]; ENSMUSG00000054640, Slc8a1, solute carrier family 8 (sodium/calcium exchanger), member 1, [Score=409, Expect=3e-128]} {Dmel: FBgn0013995, Calx, Na/Ca-exchange protein, [Score=384, Expect=7e-119]} {Celegans: WBGene00003566, ncx-1, Na/Ca eXchangers; Sodium-calcium exchanger, [Score=395, Expect=1e-123]} {Smed: dd_Smed_v6_3303_0_1, dd_Smed_v6_3303_0_1, [Score=385, Expect=6e-120]} {RNA1509_15759, RNA1509_50628} {RNA1310_3942.1, RNA1509_15759, RNA1509_50628} {RNA1509_15759, RNA1509_50628, RNA815_1046.1}
71. MligTC455_48558 141 2.94 Mlig455_046385

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_046385 {REF} {Length: 1458} {RNA1310_43065} {RNA815_11099}
72. MligTC455_52276 32 0.67 Mlig455_048266

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_048266 {REF} {Length: 3254} {RNA1509_14162} {RNA1310_1031} {RNA815_8471}
73. MligTC455_10704 11 0.24 Mlig455_011667

Neo: -

Age: Up-Down-Down

 0.952 - - - - 0.952 - Mlig455_011667 {REF} {Length: 1499} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=28.2]; Aspartyl protease [PF13650.8, score=20.0]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1}
74. MligTC455_15541 46 0.95 Mlig455_004049

Neo: -

Age: -

 SYT7 0.952 - - - - 0.952 - Mlig455_004049 {REF} {Length: 2753} {Pfam: C2 domain [PF00168.32, score=65.0]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [Score=110, Expect=2e-26]; ENSG00000143858, SYT2, synaptotagmin 2, [Score=105, Expect=1e-24]} {Mouse: ENSMUSG00000026452, Syt2, synaptotagmin II, [Score=105, Expect=1e-24]; ENSMUSG00000027849, Syt6, synaptotagmin VI, [Score=104, Expect=3e-24]; ENSMUSG00000035864, Syt1, synaptotagmin I, [Score=103, Expect=3e-24]; ENSMUSG00000024743, Syt7, synaptotagmin VII, [Score=102, Expect=1e-23]; ENSMUSG00000024261, Syt4, synaptotagmin IV, [Score=100, Expect=6e-23]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=107, Expect=1e-25]} {Celegans: WBGene00004926, snt-6, SyNapTotagmin, [Score=117, Expect=2e-29]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=103, Expect=2e-24]} {RNA1509_57171} {RNA1310_13836} {RNA815_4752.1}
75. MligTC455_18404 390 8.12 Mlig455_027551

Neo: -

Age: Down-Up-Down

 0.952 - - - - 0.952 - Mlig455_027551 {REF} {Length: 4230} {RNA1509_17329} {RNA1310_2058.1, RNA1509_17329} {RNA1509_17329, RNA815_426}
76. MligTC455_20319 207 4.31 Mlig455_062260

Neo: -

Age: -

 CSPP1 0.952 - - - 0.952 - - Mlig455_062260 {REF} {Length: 5222} {TRANSSPLICED} {Human: ENSG00000104218, CSPP1, centrosome and spindle pole associated protein 1, [RH, Score=142, Expect=1e-33]} {Mouse: ENSMUSG00000056763, Cspp1, centrosome and spindle pole associated protein 1, [RH, Score=144, Expect=2e-34]} {Smed: dd_Smed_v6_13453_0_1, dd_Smed_v6_13453_0_1, [RH, Score=140, Expect=1e-33]} {RNA1509_41667, RNA1509_4731} {RNA1310_5083.1, RNA1509_41667, RNA1509_4731} {RNA1509_41667, RNA1509_4731, RNA815_9871}
77. MligTC455_34852 681 14.19 Mlig455_040753, Mlig455_066786

Neo: -

Age: logFC(26M/2M)=-0.406

 CAPN3, CAPN9 0.952 - - - - 0.952 -

Mlig455_040753 {REF} {Length: 2907} {Pfam: Calpain family cysteine protease [PF00648.23, score=389.3]; Calpain large subunit, domain III [PF01067.24, score=132.2]; EF hand [PF00036.34, score=31.5]; EF-hand domain pair [PF13833.8, score=24.3]; EF-hand domain [PF13405.8, score=23.5]} {Human: ENSG00000135773, CAPN9, calpain 9, [Score=541, Expect=0.0]; ENSG00000092529, CAPN3, calpain 3, [Score=540, Expect=0.0]} {Mouse: ENSMUSG00000079110, Capn3, calpain 3, [Score=534, Expect=0.0]; ENSMUSG00000031981, Capn9, calpain 9, [Score=525, Expect=1e-177]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=566, Expect=0.0]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=436, Expect=8e-143]} {Smed: dd_Smed_v6_1752_0_4, dd_Smed_v6_1752_0_4, [Score=724, Expect=0.0]} {RNA1509_45636} {RNA1310_9182} {RNA815_3486}

Mlig455_066786 {REF} {Length: 4477} {Pfam: Calpain family cysteine protease [PF00648.23, score=389.2]; Calpain large subunit, domain III [PF01067.24, score=132.2]; EF hand [PF00036.34, score=32.0]; EF-hand domain pair [PF13833.8, score=23.4]; EF-hand domain [PF13405.8, score=23.2]; EF hand [PF13202.8, score=18.8]} {Human: ENSG00000092529, CAPN3, calpain 3, [Score=542, Expect=0.0]; ENSG00000135773, CAPN9, calpain 9, [Score=541, Expect=0.0]} {Mouse: ENSMUSG00000079110, Capn3, calpain 3, [Score=536, Expect=0.0]; ENSMUSG00000031981, Capn9, calpain 9, [Score=526, Expect=5e-178]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=565, Expect=0.0]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=436, Expect=2e-142]} {Smed: dd_Smed_v6_1752_0_2, dd_Smed_v6_1752_0_2, [Score=724, Expect=0.0]} {RNA1509_45636} {RNA1310_9182} {RNA815_3486}
78. MligTC455_07748 7 0.14 Mlig455_008972

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_008972 {REF} {Length: 898} {RNA1310_52744} {RNA815_35003}
79. MligTC455_11040 19 0.4 Mlig455_019286, Mlig455_030885

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_019286 {REF} {Length: 1415} {NoTransDecoderORF}

Mlig455_030885 {REF} {Length: 635} {NoTransDecoderORF}
80. MligTC455_05740 13 0.27 Mlig455_052457

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_052457 {REF} {Length: 3154} {RNA1509_39402} {RNA1310_3400} {RNA815_5315}
81. MligTC455_08037 13 0.27 Mlig455_037418, Mlig455_037484

Neo: -

Age: -

 CHRNB2, HTR3E 0.95 - - - - 0.950 -

Mlig455_037418 {REF} {Length: 1268} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=102.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=75.2]} {Human: ENSG00000160716, CHRNB2, cholinergic receptor nicotinic beta 2 subunit, [Score=129, Expect=3e-32]; ENSG00000186038, HTR3E, 5-hydroxytryptamine receptor 3E, [Score=128, Expect=3e-32]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=127, Expect=2e-31]; ENSG00000178084, HTR3C, 5-hydroxytryptamine receptor 3C, [Score=126, Expect=2e-31]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=125, Expect=4e-31]; ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=124, Expect=7e-31]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=123, Expect=3e-30]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=130, Expect=5e-33]; ENSMUSG00000027950, Chrnb2, cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal), [Score=127, Expect=6e-32]; ENSMUSG00000041189, Chrnb1, cholinergic receptor, nicotinic, beta polypeptide 1 (muscle), [Score=124, Expect=1e-30]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=137, Expect=3e-35]} {Celegans: WBGene00017580, lgc-4, Ligand-gated ion channel 4, [Score=142, Expect=1e-36]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=134, Expect=2e-34]} {RNA1509_53098} {RNA1310_100091} {RNA815_45198}

Mlig455_037484 {REF} {Length: 1840} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=99.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=75.2]} {Human: ENSG00000186038, HTR3E, 5-hydroxytryptamine receptor 3E, [Score=129, Expect=9e-33]; ENSG00000178084, HTR3C, 5-hydroxytryptamine receptor 3C, [Score=127, Expect=7e-32]; ENSG00000160716, CHRNB2, cholinergic receptor nicotinic beta 2 subunit, [Score=127, Expect=7e-32]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=127, Expect=1e-31]; ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=125, Expect=4e-31]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=125, Expect=9e-31]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=130, Expect=4e-33]; ENSMUSG00000027950, Chrnb2, cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal), [Score=127, Expect=1e-31]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=135, Expect=1e-34]} {Celegans: WBGene00001133, eat-2, Neuronal acetylcholine receptor subunit eat-2, [Score=137, Expect=5e-36]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=130, Expect=2e-33]} {RNA1509_53098} {RNA1310_100091} {RNA815_45198}
82. MligTC455_09503 271 5.65 Mlig455_037457

Neo: -

Age: -

Region-specific R4: 5.342

Region-enriched R4: 4.336/0.00000

Regeneration-downregulated R4: -3.422

Regeneration-depleted R4: -3.422

 AK1 0.95 - - - - - 0.950 Mlig455_037457 {REF} {Length: 2088} {Pfam: Adenylate kinase [PF00406.24, score=149.1]; AAA domain [PF13207.8, score=96.5]} {Human: ENSG00000106992, AK1, adenylate kinase 1, [Score=211, Expect=3e-68]} {Mouse: ENSMUSG00000026817, Ak1, adenylate kinase 1, [Score=215, Expect=3e-70]} {Dmel: FBgn0022709, Adk1, Adenylate kinase 1, [Score=150, Expect=5e-45]} {Celegans: WBGene00009531, F38B2.4, Adenylate kinase isoenzyme 1, [Score=207, Expect=4e-67]} {Smed: dd_Smed_v6_1229_0_2, dd_Smed_v6_1229_0_2, [Score=243, Expect=3e-81]} {RNA1509_20933, RNA1509_32125, RNA1509_42222} {RNA1310_39625, RNA1509_20933, RNA1509_42222} {RNA1509_20933, RNA1509_42222, RNA815_25788}
83. MligTC455_14860 14 0.3 Mlig455_033599

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_033599 {REF} {Length: 1075} {NoTransDecoderORF} {RNA1509_32111} {RNA1310_130308} {RNA815_53107.2}
84. MligTC455_49721 44 0.92 Mlig455_034966

Neo: -

Age: -

 CACNA2D4 0.95 - - - - 0.950 - Mlig455_034966 {REF} {Length: 4816} {Pfam: VWA N-terminal [PF08399.13, score=63.0]; Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=42.4]; von Willebrand factor type A domain [PF13768.8, score=29.1]; von Willebrand factor type A domain [PF00092.30, score=23.1]} {Human: ENSG00000284953, CACNA2D4, calcium voltage-gated channel auxiliary subunit alpha2delta 4, [Score=296, Expect=4e-83]; ENSG00000151062, CACNA2D4, calcium voltage-gated channel auxiliary subunit alpha2delta 4, [Score=296, Expect=4e-83]} {Mouse: ENSMUSG00000041460, Cacna2d4, calcium channel, voltage-dependent, alpha 2/delta subunit 4, [Score=302, Expect=4e-85]} {Dmel: FBgn0261041, stj, straightjacket, [Score=270, Expect=3e-74]} {Celegans: WBGene00006772, unc-36, Voltage-dependent calcium channel unc-36, [Score=191, Expect=3e-49]} {Smed: dd_Smed_v6_8926_0_2, dd_Smed_v6_8926_0_2, [Score=355, Expect=1e-103]} {RNA1509_21808, RNA1509_27675, RNA1509_48901} {RNA1310_2669.1, RNA1509_21808, RNA1509_27675, RNA1509_48901} {RNA1509_21808, RNA1509_27675, RNA1509_48901, RNA815_5027}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA