TomoSeq data search

Data search

Results for MligTC455_38673

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38673

821

17.11

Mlig455_060661

Neo: -

Age: -

MAP3K7

Mlig455_060661 {REF} {Length: 997} {Pfam: Protein kinase domain [PF00069.27, score=81.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=74.5]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=89.0, Expect=1e-20]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=89.0, Expect=1e-20]} {Dmel: FBgn0030018, slpr, slipper, [Score=66.6, Expect=4e-13]} {Celegans: WBGene00006971, zak-1, Mammalian ZAK kinase homolog, [Score=66.2, Expect=5e-13]} {Smed: dd_Smed_v6_2822_0_20, dd_Smed_v6_2822_0_20, [Score=67.0, Expect=9e-14]} {RNA1509_6833} {RNA1310_9609} {RNA815_3249.1}

Cumulative graph for MligTC455_38673

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.463	4.314	0.08690	0.63793
RegionR2	-0.234	4.314	0.74791	1.00000
RegionR3	0.822	4.314	0.09201	0.53437
RegionR4	0.997	4.314	0.08802	0.28224
RegionR5	0.092	4.314	0.85776	1.00000
RegionR6	0.706	4.314	0.16974	0.72641
RegionR7	1.025	4.314	0.08821	0.56946
RegionR8	0.055	4.314	0.93820	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.267	4.314	0.17237	0.91661
RegenerationR2	0.371	4.314	0.37907	0.80097
RegenerationR3	0.04	4.314	0.93530	1.00000
RegenerationR4	0.226	4.314	0.63267	0.92432
RegenerationR5	0.783	4.314	0.08512	0.44989
RegenerationR6	0.145	4.314	0.75622	0.95518
RegenerationBL	0.805	4.314	0.09768	0.36678
RegenerationTP	1.487	4.314	0.00475	0.11463

Genes with expression patterns similar to MligTC455_38673

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38673	821	17.11	Mlig455_060661	Neo: - Age: -	MAP3K7	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_060661 {REF} {Length: 997} {Pfam: Protein kinase domain [PF00069.27, score=81.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=74.5]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=89.0, Expect=1e-20]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=89.0, Expect=1e-20]} {Dmel: FBgn0030018, slpr, slipper, [Score=66.6, Expect=4e-13]} {Celegans: WBGene00006971, zak-1, Mammalian ZAK kinase homolog, [Score=66.2, Expect=5e-13]} {Smed: dd_Smed_v6_2822_0_20, dd_Smed_v6_2822_0_20, [Score=67.0, Expect=9e-14]} {RNA1509_6833} {RNA1310_9609} {RNA815_3249.1}
2.	MligTC455_38672	1838	38.3	Mlig455_025594, Mlig455_060614	Neo: - Age: -	MAP3K7	5.84	0.988	0.966	0.911	0.996	0.983	0.996	Mlig455_025594 {REF} {Length: 3541} {Pfam: Protein kinase domain [PF00069.27, score=158.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=151.5]; Fungal protein kinase [PF17667.3, score=24.7]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=23.1]; MraW methylase family [PF01795.21, score=22.0]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=152, Expect=4e-39]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=152, Expect=4e-39]} {Dmel: FBgn0026323, Tak1, TGF-beta activated kinase 1, [Score=114, Expect=7e-26]} {Celegans: WBGene00001008, dlk-1, Mitogen-activated protein kinase kinase kinase dlk-1, [Score=102, Expect=3e-22]} {Smed: dd_Smed_v6_953_0_1, dd_Smed_v6_953_0_1, [Score=129, Expect=2e-31]} {RNA1509_6833} {RNA1310_11206} {RNA815_3249.1} Mlig455_060614 {REF} {Length: 2473} {Pfam: Protein kinase domain [PF00069.27, score=158.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=152.1]; Fungal protein kinase [PF17667.3, score=25.2]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=23.1]; MraW methylase family [PF01795.21, score=22.6]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=154, Expect=5e-40]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=154, Expect=4e-40]} {Dmel: FBgn0026323, Tak1, TGF-beta activated kinase 1, [Score=115, Expect=1e-26]} {Celegans: WBGene00001008, dlk-1, Mitogen-activated protein kinase kinase kinase dlk-1, [Score=104, Expect=5e-23]} {Smed: dd_Smed_v6_953_0_1, dd_Smed_v6_953_0_1, [Score=128, Expect=1e-31]} {RNA1509_47567, RNA1509_6833} {RNA1310_9609, RNA1509_47567} {RNA1509_47567, RNA815_3249.1}
3.	MligTC455_45182	1838	38.29	Mlig455_016689	Neo: - Age: -	GNAO1	2.447	-	-	0.759	0.720	-	0.968	Mlig455_016689 {REF} {Length: 2862} {TRANSSPLICED} {Pfam: G-protein alpha subunit [PF00503.22, score=408.8]; ADP-ribosylation factor family [PF00025.23, score=62.5]; Gtr1/RagA G protein conserved region [PF04670.14, score=24.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=20.3]} {Human: ENSG00000087258, GNAO1, G protein subunit alpha o1, [RH, Score=619, Expect=0.0]} {Mouse: ENSMUSG00000031748, Gnao1, guanine nucleotide binding protein, alpha O, [RH, Score=612, Expect=0.0]} {Dmel: FBgn0001122, Galphao, G protein alpha o subunit, [RH, Score=649, Expect=0.0]} {Celegans: WBGene00001648, goa-1, Guanine nucleotide-binding protein G(o) subunit alpha, [RH, Score=648, Expect=0.0]} {Smed: dd_Smed_v6_1656_0_3, dd_Smed_v6_1656_0_3, [RH, Score=671, Expect=0.0]} {RNA1509_44439, RNA1509_48026, RNA1509_9073} {RNA1310_26362, RNA1509_44439, RNA1509_48026, RNA1509_9073} {RNA1509_44439, RNA1509_48026, RNA1509_9073, RNA815_15072}
4.	MligTC455_46047	71	1.48	Mlig455_003968, Mlig455_012751, Mlig455_019818, Mlig455_042549	Neo: - Age: Up-Down-Down		1.714	-	-	-	-	0.956	0.758	Mlig455_003968 {REF} {Length: 1636} {RNA1509_32911} {RNA1310_1680} {RNA815_2080} Mlig455_012751 {REF} {Length: 1531} {RNA1509_15268} {RNA1310_1680} {RNA815_2080} Mlig455_019818 {REF} {Length: 1294} {NoTransDecoderORF} {RNA1509_15268} {RNA1310_1680} {RNA815_2080} Mlig455_042549 {REF} {Length: 1623} {RNA1509_32911} {RNA1310_1680} {RNA815_2080}
5.	MligTC455_08911	45	0.94	Mlig455_034546, Mlig455_064818	Neo: - Age: Down-Up-Down Region-enriched R2: 5.958/0.00652		0.984	-	-	-	-	0.984	-	Mlig455_034546 {REF} {Length: 510} {RNA1310_82673} Mlig455_064818 {REF} {Length: 2324} {RNA1310_63036}
6.	MligTC455_25852	257	5.35	Mlig455_026376	Neo: - Age: Down-Up-Down Region-enriched R7: 2.913/0.04400		0.98	-	-	-	-	-	0.980	Mlig455_026376 {REF} {Length: 1440} {Pfam: PLAC8 family [PF04749.19, score=60.9]} {Smed: dd_Smed_v6_865_0_1, dd_Smed_v6_865_0_1, [Score=98.2, Expect=1e-26]} {RNA1509_36976} {RNA1310_18646} {RNA815_10637.1}
7.	MligTC455_01849	9	0.19	Mlig455_047954	Neo: - Age: -		0.977	-	-	-	-	0.977	-	Mlig455_047954 {REF} {Length: 100} {NoTransDecoderORF} {RNA1509_25809} {RNA1310_27224.2} {RNA815_4317.1}
8.	MligTC455_20933	21	0.43	Mlig455_013811	Neo: - Age: -		0.977	-	-	-	-	0.977	-	Mlig455_013811 {REF} {Length: 2349} {Pfam: Glycine rich protein [PF12810.9, score=43.4]; PAN domain [PF00024.28, score=21.7]} {RNA1310_61234} {RNA815_39176}
9.	MligTC455_22789	3278	68.29	Mlig455_006910	Neo: - Age: -		0.971	-	-	-	0.971	-	-	Mlig455_006910 {REF} {Length: 1335} {Pfam: Sleepless protein [PF17064.7, score=30.2]} {Smed: dd_Smed_v6_3412_0_1, dd_Smed_v6_3412_0_1, [Score=152, Expect=7e-48]} {RNA1509_48937} {RNA1310_25717.1, RNA1509_48937} {RNA1509_48937, RNA815_11711.2}
10.	MligTC455_11069	184	3.83	Mlig455_038504	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_038504 {REF} {Length: 816} {RNA1310_51357} {RNA815_24712}
11.	MligTC455_18114	414	8.63	Mlig455_038324, Mlig455_050230	Neo: - Age: Down-Up-Down		0.965	-	-	-	-	0.965	-	Mlig455_038324 {REF} {Length: 2163} {Pfam: Transmembrane protein family 72 [PF16054.7, score=60.9]} {Smed: dd_Smed_v6_6789_0_1, dd_Smed_v6_6789_0_1, [RH, Score=94.7, Expect=4e-24]} {RNA1509_37575} {RNA1310_23999} {RNA815_9176.1} Mlig455_050230 {REF} {Length: 2326} {Pfam: Transmembrane protein family 72 [PF16054.7, score=60.9]} {Smed: dd_Smed_v6_6789_0_1, dd_Smed_v6_6789_0_1, [RH, Score=94.7, Expect=4e-24]} {RNA1509_37575} {RNA1310_23999, RNA1509_37575} {RNA1509_37575, RNA815_26984}
12.	MligTC455_17504	9	0.18	Mlig455_001678	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_001678 {REF} {Length: 941} {NoTransDecoderORF} {RNA1310_134213}
13.	MligTC455_39066	7621	158.77	Mlig455_003483	Neo: - Age: logFC(26M/2M)=-0.600 Regeneration-downregulated BL: -1.940 Regeneration-depleted BL: -1.940	GSTP1	0.96	-	-	-	-	0.960	-	Mlig455_003483 {REF} {Length: 1133} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=56.7]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=33.6]; Glutathione S-transferase, N-terminal domain [PF13417.8, score=26.4]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=26.1]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=20.4]; Glutathione S-transferase N-terminal domain [PF17172.6, score=20.3]} {Human: ENSG00000084207, GSTP1, glutathione S-transferase pi 1, [Score=139, Expect=1e-40]} {Mouse: ENSMUSG00000097830, Gstp1, glutathione S-transferase, pi 1, [RH, Score=144, Expect=8e-43]; ENSMUSG00000060803, Gstp1, glutathione S-transferase, pi 1, [RH, Score=144, Expect=8e-43]} {Dmel: FBgn0010226, GstS1, Glutathione S transferase S1, [RH, Score=99.8, Expect=2e-25]} {Celegans: WBGene00001749, gst-1, Glutathione S-transferase P, [RH, Score=147, Expect=1e-44]} {Smed: dd_Smed_v6_20_0_1, dd_Smed_v6_20_0_1, [Score=96.3, Expect=7e-25]} {RNA1509_37855, RNA1509_42842, RNA1509_53728, RNA1509_6171} {RNA1310_28502.1, RNA1509_37855, RNA1509_42842, RNA1509_53728, RNA1509_6171} {RNA1509_37855, RNA1509_42842, RNA1509_53728, RNA1509_6171, RNA815_13314}
14.	MligTC455_20961	1780	37.08	Mlig455_031266	Neo: - Age: logFC(26M/2M)=-0.283 Region-enriched R2: 1.483/0.00269	WDR63	0.956	-	-	0.956	-	-	-	Mlig455_031266 {REF} {Length: 3089} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=24.4]} {Human: ENSG00000162643, WDR63, WD repeat domain 63, [RH, Score=594, Expect=0.0]} {Mouse: ENSMUSG00000043020, Wdr63, WD repeat domain 63, [RH, Score=573, Expect=0.0]} {Dmel: FBgn0035799, CG14838, [RH, Score=176, Expect=1e-44]} {Smed: dd_Smed_v6_9187_0_1, dd_Smed_v6_9187_0_1, [RH, Score=736, Expect=0.0]} {RNA1509_2565} {RNA1310_5160, RNA1509_2565} {RNA1509_2565, RNA815_1888}
15.	MligTC455_22477	33	0.68	Mlig455_001151	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_001151 {REF} {Length: 2314} {NoTransDecoderORF} {RNA1509_20868} {RNA1310_38923} {RNA815_3666.1}
16.	MligTC455_44929	341	7.1	Mlig455_012887	Neo: - Age: Down-Up-Up Region-enriched R6: 2.240/0.01093	RBM12B	0.954	-	-	-	-	-	0.954	Mlig455_012887 {REF} {Length: 3080} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=49.7, Expect=3e-06]} {RNA1509_17943, RNA1509_43157} {RNA1310_23294, RNA1509_43157} {RNA1509_43157, RNA815_20333}
17.	MligTC455_35822	2653	55.28	Mlig455_036751	Neo: - Age: -	MYL9	0.953	-	-	-	0.953	-	-	Mlig455_036751 {REF} {Length: 1513} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=54.0]; EF-hand domain [PF13405.8, score=50.7]; EF-hand domain pair [PF13499.8, score=49.8]; EF hand [PF13202.8, score=34.0]; EF-hand domain pair [PF13833.8, score=32.8]; EF-hand domain [PF08976.13, score=22.5]} {Human: ENSG00000101335, MYL9, myosin light chain 9, [RH, Score=213, Expect=4e-71]; ENSG00000118680, MYL12B, myosin light chain 12B, [RH, Score=213, Expect=4e-71]; ENSG00000101608, MYL12A, myosin light chain 12A, [RH, Score=213, Expect=9e-71]} {Mouse: ENSMUSG00000117098, AC154187.2, novel protein, [RH, Score=213, Expect=2e-71]; ENSMUSG00000034868, Myl12b, myosin, light chain 12B, regulatory, [RH, Score=213, Expect=3e-71]; ENSMUSG00000024048, Myl12a, myosin, light chain 12A, regulatory, non-sarcomeric, [RH, Score=213, Expect=2e-71]; ENSMUSG00000067818, Myl9, myosin, light polypeptide 9, regulatory, [RH, Score=212, Expect=1e-70]} {Dmel: FBgn0003514, sqh, spaghetti squash, [RH, Score=218, Expect=2e-73]} {Celegans: WBGene00003372, mlc-4, Myosin regulatory light chain, [RH, Score=217, Expect=4e-73]} {Smed: dd_Smed_v6_383_0_1, dd_Smed_v6_383_0_1, [RH, Score=254, Expect=1e-87]} {RNA1509_1375, RNA1509_16769, RNA1509_2323, RNA1509_2418, RNA1509_32870, RNA1509_44676, RNA1509_45916, RNA1509_50731, RNA1509_51470, RNA1509_6738, RNA1509_7577, RNA1509_9536} {RNA1310_20902.1, RNA1509_1375, RNA1509_16769, RNA1509_2323, RNA1509_2418, RNA1509_32870, RNA1509_44676, RNA1509_45916, RNA1509_50731, RNA1509_51470, RNA1509_6738, RNA1509_7577, RNA1509_9536} {RNA1509_1375, RNA1509_16769, RNA1509_2323, RNA1509_2418, RNA1509_32870, RNA1509_44676, RNA1509_45916, RNA1509_50731, RNA1509_51470, RNA1509_6738, RNA1509_7577, RNA1509_9536, RNA815_8312.1}
18.	MligTC455_53051	399	8.32	Mlig455_040562	Neo: - Age: Up-Up-Up, logFC(26M/2M)=0.851	LDB3	0.952	-	-	-	-	-	0.952	Mlig455_040562 {REF} {Length: 3536} {Pfam: PDZ domain [PF00595.26, score=45.7]; PDZ domain [PF17820.3, score=35.5]; LIM domain [PF00412.24, score=25.1]; PDZ domain [PF13180.8, score=18.9]} {Human: ENSG00000122367, LDB3, LIM domain binding 3, [Score=67.0, Expect=3e-12]; ENSG00000196923, PDLIM7, PDZ and LIM domain 7, [Score=65.1, Expect=5e-11]} {Mouse: ENSMUSG00000021493, Pdlim7, PDZ and LIM domain 7, [Score=67.4, Expect=5e-12]; ENSMUSG00000021798, Ldb3, LIM domain binding 3, [Score=66.6, Expect=1e-11]} {Dmel: FBgn0265991, Zasp52, Z band alternatively spliced PDZ-motif protein 52, [Score=110, Expect=2e-26]} {Smed: dd_Smed_v6_4618_0_1, dd_Smed_v6_4618_0_1, [Score=150, Expect=2e-43]} {RNA1509_27138} {RNA1310_17148} {RNA815_14040.1}
19.	MligTC455_11479	25	0.52	Mlig455_038924	Neo: - Age: - Regeneration-enriched R3: 7.663 Regeneration-enriched R4: 7.225	AVP	0.95	-	-	-	-	0.950	-	Mlig455_038924 {REF} {Length: 1513} {Pfam: Neurohypophysial hormones, C-terminal Domain [PF00184.19, score=54.9]} {Human: ENSG00000101200, AVP, arginine vasopressin, [Score=43.5, Expect=7e-06]} {Mouse: ENSMUSG00000037727, Avp, arginine vasopressin, [Score=45.4, Expect=1e-06]} {RNA1509_55830} {RNA1310_49297} {RNA815_9217}

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