TomoSeq data search

Data search

Results for MligTC455_38737

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_38737	486	10.12	Mlig455_000809, Mlig455_067275	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.722	CALM2	Mlig455_000809 {REF} {Length: 2373} {Pfam: EF-hand domain pair [PF13499.8, score=86.2]; EF hand [PF00036.34, score=70.0]; EF-hand domain pair [PF13833.8, score=58.9]; EF-hand domain [PF13405.8, score=57.4]; EF hand [PF13202.8, score=40.1]; EF-hand domain [PF14658.8, score=26.4]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=102, Expect=2e-25]; ENSG00000198668, CALM1, calmodulin 1, [Score=99.0, Expect=1e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=98.6, Expect=1e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=104, Expect=1e-26]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=99.4, Expect=3e-25]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=99.0, Expect=3e-25]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=99.0, Expect=3e-25]} {RNA1509_22752} {RNA1310_16668.1, RNA1509_22752} {RNA1509_22752, RNA815_10085.1} Mlig455_067275 {REF} {Length: 2268} {Pfam: EF-hand domain pair [PF13499.8, score=86.2]; EF hand [PF00036.34, score=70.0]; EF-hand domain pair [PF13833.8, score=58.9]; EF-hand domain [PF13405.8, score=57.4]; EF hand [PF13202.8, score=40.1]; EF-hand domain [PF14658.8, score=26.4]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=102, Expect=2e-25]; ENSG00000198668, CALM1, calmodulin 1, [Score=99.0, Expect=1e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=98.6, Expect=1e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=104, Expect=1e-26]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=99.4, Expect=3e-25]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=99.0, Expect=3e-25]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=99.0, Expect=3e-25]} {RNA1509_22608, RNA1509_22752} {RNA1310_16668.1, RNA1509_22608} {RNA1509_22608, RNA815_10085.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38737

486

10.12

Mlig455_000809, Mlig455_067275

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.722

CALM2

Mlig455_000809 {REF} {Length: 2373} {Pfam: EF-hand domain pair [PF13499.8, score=86.2]; EF hand [PF00036.34, score=70.0]; EF-hand domain pair [PF13833.8, score=58.9]; EF-hand domain [PF13405.8, score=57.4]; EF hand [PF13202.8, score=40.1]; EF-hand domain [PF14658.8, score=26.4]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=102, Expect=2e-25]; ENSG00000198668, CALM1, calmodulin 1, [Score=99.0, Expect=1e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=98.6, Expect=1e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=104, Expect=1e-26]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=99.4, Expect=3e-25]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=99.0, Expect=3e-25]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=99.0, Expect=3e-25]} {RNA1509_22752} {RNA1310_16668.1, RNA1509_22752} {RNA1509_22752, RNA815_10085.1}

Mlig455_067275 {REF} {Length: 2268} {Pfam: EF-hand domain pair [PF13499.8, score=86.2]; EF hand [PF00036.34, score=70.0]; EF-hand domain pair [PF13833.8, score=58.9]; EF-hand domain [PF13405.8, score=57.4]; EF hand [PF13202.8, score=40.1]; EF-hand domain [PF14658.8, score=26.4]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=102, Expect=2e-25]; ENSG00000198668, CALM1, calmodulin 1, [Score=99.0, Expect=1e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=98.6, Expect=1e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=104, Expect=1e-26]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=99.4, Expect=3e-25]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=99.0, Expect=3e-25]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=99.0, Expect=3e-25]} {RNA1509_22608, RNA1509_22752} {RNA1310_16668.1, RNA1509_22608} {RNA1509_22608, RNA815_10085.1}

Cumulative graph for MligTC455_38737

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.609	3.662	0.66907	1.00000
RegionR2	0.513	3.662	0.28013	0.66702
RegionR3	0.463	3.662	0.21771	0.75880
RegionR4	-0.047	3.662	0.92754	1.00000
RegionR5	-0.978	3.662	0.02649	0.11854
RegionR6	-0.461	3.662	0.30024	0.89146
RegionR7	-0.14	3.662	0.80976	1.00000
RegionR8	1.258	3.662	0.02960	0.33541

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.146	3.662	0.22435	0.95604
RegenerationR2	-0.087	3.662	0.80639	0.99184
RegenerationR3	-0.555	3.662	0.18613	0.62265
RegenerationR4	-0.046	3.662	0.91786	1.00000
RegenerationR5	0.06	3.662	0.88912	1.00000
RegenerationR6	-0.204	3.662	0.67202	0.90959
RegenerationBL	-0.207	3.662	0.69693	1.00000
RegenerationTP	0.05	3.662	0.92677	1.00000

Genes with expression patterns similar to MligTC455_38737

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38737	486	10.12	Mlig455_000809, Mlig455_067275	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.722	CALM2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000809 {REF} {Length: 2373} {Pfam: EF-hand domain pair [PF13499.8, score=86.2]; EF hand [PF00036.34, score=70.0]; EF-hand domain pair [PF13833.8, score=58.9]; EF-hand domain [PF13405.8, score=57.4]; EF hand [PF13202.8, score=40.1]; EF-hand domain [PF14658.8, score=26.4]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=102, Expect=2e-25]; ENSG00000198668, CALM1, calmodulin 1, [Score=99.0, Expect=1e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=98.6, Expect=1e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=104, Expect=1e-26]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=99.4, Expect=3e-25]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=99.0, Expect=3e-25]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=99.0, Expect=3e-25]} {RNA1509_22752} {RNA1310_16668.1, RNA1509_22752} {RNA1509_22752, RNA815_10085.1} Mlig455_067275 {REF} {Length: 2268} {Pfam: EF-hand domain pair [PF13499.8, score=86.2]; EF hand [PF00036.34, score=70.0]; EF-hand domain pair [PF13833.8, score=58.9]; EF-hand domain [PF13405.8, score=57.4]; EF hand [PF13202.8, score=40.1]; EF-hand domain [PF14658.8, score=26.4]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=102, Expect=2e-25]; ENSG00000198668, CALM1, calmodulin 1, [Score=99.0, Expect=1e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=98.6, Expect=1e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=104, Expect=1e-26]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=99.4, Expect=3e-25]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=99.0, Expect=3e-25]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=99.0, Expect=3e-25]} {RNA1509_22608, RNA1509_22752} {RNA1310_16668.1, RNA1509_22608} {RNA1509_22608, RNA815_10085.1}
2.	MligTC455_33512	1175	24.48	Mlig455_057379, Mlig455_057402	Neo: - Age: - Region-enriched R4: 2.938/0.00125		1.698	-	0.737	-	-	-	0.961	Mlig455_057379 {REF} {Length: 2204} {RNA1509_32988} {RNA1310_29363} {RNA815_15857.1} Mlig455_057402 {REF} {Length: 2840} {RNA1509_32988} {RNA1310_29363, RNA1509_32988} {RNA1509_32988, RNA815_15857.1}
3.	MligTC455_53756	3248	67.67	Mlig455_026858	Neo: - Age: -		1.68	-	-	0.713	-	-	0.967	Mlig455_026858 {REF} {Length: 1830} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22665, RNA1509_54839, RNA1509_945} {RNA1310_12502.1, RNA1509_22665, RNA1509_54839} {RNA1509_22665, RNA1509_54839, RNA815_6164.1}
4.	MligTC455_37020	1054	21.96	Mlig455_043497	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.666 Region-enriched R5: 1.199/0.01021	CYP2J2	1.675	-	0.716	-	0.959	-	-	Mlig455_043497 {REF} {Length: 2183} {Pfam: Cytochrome P450 [PF00067.24, score=322.9]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=244, Expect=4e-74]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=236, Expect=4e-71]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=236, Expect=5e-71]; ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=236, Expect=7e-71]; ENSG00000186104, CYP2R1, cytochrome P450 family 2 subfamily R member 1, [Score=232, Expect=1e-69]} {Mouse: ENSMUSG00000052974, Cyp2f2, cytochrome P450, family 2, subfamily f, polypeptide 2, [RH, Score=251, Expect=2e-77]; ENSMUSG00000096852, Cyp2d12, cytochrome P450, family 2, subfamily d, polypeptide 12, [RH, Score=245, Expect=9e-75]; ENSMUSG00000030670, Cyp2r1, cytochrome P450, family 2, subfamily r, polypeptide 1, [RH, Score=242, Expect=1e-73]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [RH, Score=254, Expect=5e-78]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=225, Expect=2e-67]} {Smed: dd_Smed_v6_2351_0_1, dd_Smed_v6_2351_0_1, [RH, Score=280, Expect=2e-88]} {RNA1509_48428} {RNA1310_15448, RNA1509_48428} {RNA1509_48428, RNA815_13331}
5.	MligTC455_36128	429	8.94	Mlig455_066220	Neo: - Age: Up-Down-Down	MADD	1.674	-	0.953	0.721	-	-	-	Mlig455_066220 {REF} {Length: 5775} {TRANSSPLICED} {Pfam: DENN (AEX-3) domain [PF02141.23, score=101.4]; uDENN domain [PF03456.20, score=39.7]} {Human: ENSG00000110514, MADD, MAP kinase activating death domain, [Score=341, Expect=4e-96]} {Mouse: ENSMUSG00000040687, Madd, MAP-kinase activating death domain, [Score=339, Expect=6e-96]} {Dmel: FBgn0030613, Rab3-GEF, Rab3 GDP-GTP exchange factor, [Score=337, Expect=6e-95]} {Celegans: WBGene00000086, aex-3, MAP kinase-activating death domain protein, [Score=378, Expect=7e-110]} {Smed: dd_Smed_v6_8355_0_1, dd_Smed_v6_8355_0_1, [Score=436, Expect=2e-137]} {RNA1509_19227} {RNA1310_4163, RNA1509_19227} {RNA1509_19227, RNA815_25214}
6.	MligTC455_25808	419	8.73	Mlig455_031559	Neo: - Age: -	ENDOV	0.981	-	-	-	-	-	0.981	Mlig455_031559 {REF} {Length: 2203} {Pfam: Endonuclease V [PF04493.16, score=203.3]} {Human: ENSG00000173818, ENDOV, endonuclease V, [RH, Score=202, Expect=9e-63]} {Mouse: ENSMUSG00000039850, Endov, endonuclease V, [RH, Score=207, Expect=4e-64]} {Celegans: WBGene00007464, C08H9.3, Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase, [Score=97.8, Expect=4e-22]} {Smed: dd_Smed_v6_9595_0_3, dd_Smed_v6_9595_0_3, [RH, Score=112, Expect=9e-29]} {RNA1509_46904} {RNA1310_32480} {RNA815_14313.1}
7.	MligTC455_50316	373	7.77	Mlig455_051680	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.313		0.972	-	-	-	0.972	-	-	Mlig455_051680 {REF} {Length: 1191} {RNA1509_19772} {RNA1310_39074, RNA1509_19772} {RNA1509_19772, RNA815_13603}
8.	MligTC455_46574	1300	27.09	Mlig455_064492, Mlig455_066053	Neo: - Age: logFC(26M/2M)=-0.519		0.951	-	0.951	-	-	-	-	Mlig455_064492 {REF} {Length: 994} {RNA1509_19156} {RNA1310_40992.1} {RNA815_20608} Mlig455_066053 {REF} {Length: 994} {RNA1509_19156, RNA1509_29134} {RNA1310_40992.1, RNA1509_19156, RNA1509_29134} {RNA1509_19156, RNA1509_29134, RNA815_20608}
9.	MligTC455_17047	353	7.36	Mlig455_008112	Neo: - Age: Down-Up-Up Region-enriched R4: 1.966/0.03620		0.95	-	-	-	0.950	-	-	Mlig455_008112 {REF} {Length: 1341} {RNA1509_23731} {RNA1310_20367.2} {RNA815_10999}
10.	MligTC455_36535	423	8.81	Mlig455_032715	Neo: - Age: -	SYS1	0.95	-	-	-	-	-	0.950	Mlig455_032715 {REF} {Length: 1675} {TRANSSPLICED} {Pfam: Integral membrane protein S linking to the trans Golgi network [PF09801.11, score=154.9]} {Human: ENSG00000204070, SYS1, SYS1, golgi trafficking protein, [RH, Score=142, Expect=9e-44]} {Mouse: ENSMUSG00000045503, Sys1, SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae), [RH, Score=143, Expect=3e-44]} {Dmel: FBgn0037603, CG11753, [RH, Score=121, Expect=2e-35]} {Celegans: WBGene00020193, T03F1.12, [RH, Score=100, Expect=8e-28]} {RNA1509_23153, RNA1509_37958} {RNA1310_26666, RNA1509_37958} {RNA1509_37958, RNA815_15598}