Data search
Results for MligTC455_38848
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38848 | 524 | 10.92 | Mlig455_023471 | Neo: - Age: Down-Up-Down |
DYNC2LI1 | Mlig455_023471 {REF} {Length: 2561} {TRANSSPLICED} {Pfam: Dynein light intermediate chain (DLIC) [PF05783.13, score=48.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=26.1]; ADP-ribosylation factor family [PF00025.23, score=25.2]} {Human: ENSG00000138036, DYNC2LI1, dynein cytoplasmic 2 light intermediate chain 1, [RH, Score=249, Expect=1e-79]} {Mouse: ENSMUSG00000024253, Dync2li1, dynein cytoplasmic 2 light intermediate chain 1, [RH, Score=258, Expect=2e-83]} {Dmel: FBgn0032119, CG3769, [RH, Score=144, Expect=3e-39]} {Celegans: WBGene00006960, xbx-1, X-BoX promoter element regulated, [RH, Score=186, Expect=2e-55]} {Smed: dd_Smed_v6_4291_0_1, dd_Smed_v6_4291_0_1, [RH, Score=277, Expect=4e-91]} {RNA1509_9549} {RNA1310_22996, RNA1509_9549} {RNA1509_9549, RNA815_3626.1} |
Cumulative graph for MligTC455_38848
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.91 | 3.857 | 0.46269 | 1.00000 | |
| RegionR2 | 0.571 | 3.857 | 0.26351 | 0.64548 | |
| RegionR3 | 0.811 | 3.857 | 0.03321 | 0.31525 | |
| RegionR4 | 0.263 | 3.857 | 0.58253 | 0.89877 | |
| RegionR5 | 0.935 | 3.857 | 0.00697 | 0.04445 | |
| RegionR6 | 0.023 | 3.857 | 0.95595 | 1.00000 | |
| RegionR7 | -0.927 | 3.857 | 0.10775 | 0.62315 | |
| RegionR8 | -0.767 | 3.857 | 0.23869 | 0.85501 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.902 | 3.857 | 0.22460 | 0.95604 | |
| RegenerationR2 | -0.311 | 3.857 | 0.44191 | 0.84107 | |
| RegenerationR3 | -0.764 | 3.857 | 0.09025 | 0.48548 | |
| RegenerationR4 | -0.253 | 3.857 | 0.60025 | 0.91355 | |
| RegenerationR5 | -0.603 | 3.857 | 0.14707 | 0.56379 | |
| RegenerationR6 | -0.536 | 3.857 | 0.29624 | 0.64668 | |
| RegenerationBL | 1.025 | 3.857 | 0.06402 | 0.29385 | |
| RegenerationTP | -0.135 | 3.857 | 0.84705 | 1.00000 |
Genes with expression patterns similar to MligTC455_38848
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38848 | 524 | 10.92 | Mlig455_023471 | Neo: - Age: Down-Up-Down |
DYNC2LI1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_023471 {REF} {Length: 2561} {TRANSSPLICED} {Pfam: Dynein light intermediate chain (DLIC) [PF05783.13, score=48.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=26.1]; ADP-ribosylation factor family [PF00025.23, score=25.2]} {Human: ENSG00000138036, DYNC2LI1, dynein cytoplasmic 2 light intermediate chain 1, [RH, Score=249, Expect=1e-79]} {Mouse: ENSMUSG00000024253, Dync2li1, dynein cytoplasmic 2 light intermediate chain 1, [RH, Score=258, Expect=2e-83]} {Dmel: FBgn0032119, CG3769, [RH, Score=144, Expect=3e-39]} {Celegans: WBGene00006960, xbx-1, X-BoX promoter element regulated, [RH, Score=186, Expect=2e-55]} {Smed: dd_Smed_v6_4291_0_1, dd_Smed_v6_4291_0_1, [RH, Score=277, Expect=4e-91]} {RNA1509_9549} {RNA1310_22996, RNA1509_9549} {RNA1509_9549, RNA815_3626.1} |
| 2. | MligTC455_51327 | 321 | 6.69 | Mlig455_060958 | Neo: - Age: - |
2.431 | - | 0.769 | - | 0.953 | - | 0.709 | Mlig455_060958 {REF} {Length: 2116} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [Score=177, Expect=1e-55]} {RNA1509_26146} {RNA1310_14081.2, RNA1509_26146} {RNA1509_26146, RNA815_12360} | |
| 3. | MligTC455_46077 | 28 | 0.59 | Mlig455_033572 | Neo: - Age: Down-Up-Down |
UFC1 | 0.973 | - | - | - | - | 0.973 | - | Mlig455_033572 {REF} {Length: 1485} {TRANSSPLICED} {Pfam: Ubiquitin-fold modifier-conjugating enzyme 1 [PF08694.13, score=281.3]} {Human: ENSG00000143222, UFC1, ubiquitin-fold modifier conjugating enzyme 1, [RH, Score=286, Expect=4e-100]} {Mouse: ENSMUSG00000062963, Ufc1, ubiquitin-fold modifier conjugating enzyme 1, [RH, Score=282, Expect=8e-99]} {Dmel: FBgn0034061, Ufc1, Ubiquitin-fold modifier conjugating enzyme 1, [RH, Score=284, Expect=1e-99]} {Celegans: WBGene00008041, ufc-1, Ubiquitin-fold modifier-conjugating enzyme 1, [RH, Score=263, Expect=2e-91]} {Smed: dd_Smed_v6_4590_0_1, dd_Smed_v6_4590_0_1, [RH, Score=294, Expect=8e-104]} {RNA1509_49289, RNA1509_5279} {RNA1310_33140, RNA1509_5279} {RNA1509_5279, RNA815_11898} |
| 4. | MligTC455_46078 | 28 | 0.58 | Mlig455_067060 | Neo: - Age: Down-Up-Down |
UFC1 | 0.973 | - | - | - | - | 0.973 | - | Mlig455_067060 {REF} {Length: 1498} {TRANSSPLICED} {Pfam: Ubiquitin-fold modifier-conjugating enzyme 1 [PF08694.13, score=281.3]} {Human: ENSG00000143222, UFC1, ubiquitin-fold modifier conjugating enzyme 1, [RH, Score=286, Expect=4e-100]} {Mouse: ENSMUSG00000062963, Ufc1, ubiquitin-fold modifier conjugating enzyme 1, [RH, Score=282, Expect=8e-99]} {Dmel: FBgn0034061, Ufc1, Ubiquitin-fold modifier conjugating enzyme 1, [RH, Score=284, Expect=1e-99]} {Celegans: WBGene00008041, ufc-1, Ubiquitin-fold modifier-conjugating enzyme 1, [RH, Score=263, Expect=2e-91]} {Smed: dd_Smed_v6_4590_0_1, dd_Smed_v6_4590_0_1, [RH, Score=294, Expect=8e-104]} {RNA1509_5279} {RNA1310_33140} {RNA815_11898} |
| 5. | MligTC455_28663 | 25389 | 528.93 | Mlig455_026029 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.557 Regeneration-upregulated BL: 1.816 Regeneration-enriched BL: 1.816 |
0.961 | - | - | - | 0.961 | - | - | Mlig455_026029 {REF} {Length: 884} {RNA1509_18581, RNA1509_18838, RNA1509_4046, RNA1509_761, RNA1509_9421} {RNA1310_73021.2, RNA1509_18581, RNA1509_18838, RNA1509_4046, RNA1509_761, RNA1509_9421} {RNA1509_18581, RNA1509_18838, RNA1509_4046, RNA1509_761, RNA1509_9421, RNA815_26455.2} | |
| 6. | MligTC455_28665 | 11976 | 249.5 | Mlig455_026030, Mlig455_050842 | Neo: - Age: Down-Up-Down Regeneration-enriched BL: 2.115 |
0.958 | - | - | - | 0.958 | - | - | Mlig455_026030 {REF} {Length: 518} {RNA1509_34450} {RNA1310_106346} {RNA815_39706} Mlig455_050842 {REF} {Length: 634} {RNA1509_34450} {RNA1310_106346} {RNA815_39706} |
|
| 7. | MligTC455_28664 | 5401 | 112.51 | Mlig455_050841 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.698 Regeneration-upregulated BL: 2.197 Regeneration-enriched BL: 2.197 |
0.957 | - | - | - | 0.957 | - | - | Mlig455_050841 {REF} {Length: 893} {RNA1509_1353, RNA1509_761} {RNA1310_73021.1, RNA1509_1353} {RNA1509_1353, RNA815_26455.2} | |
| 8. | MligTC455_49780 | 780 | 16.24 | Mlig455_053889 | Neo: - Age: Down-Up-Down |
TAX1BP3 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_053889 {REF} {Length: 1679} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=47.9]; PDZ domain [PF17820.3, score=42.3]; PDZ domain [PF13180.8, score=29.5]} {Human: ENSG00000213977, TAX1BP3, Tax1 binding protein 3, [RH, Score=69.7, Expect=1e-15]} {Mouse: ENSMUSG00000040158, Tax1bp3, Tax1 (human T cell leukemia virus type I) binding protein 3, [RH, Score=69.7, Expect=9e-16]} {Dmel: FBgn0035148, CG3402, [RH, Score=88.2, Expect=4e-23]} {Celegans: WBGene00016678, C45G9.7, [RH, Score=92.0, Expect=1e-24]} {Smed: dd_Smed_v6_7732_0_1, dd_Smed_v6_7732_0_1, [Score=47.8, Expect=4e-07]} {RNA1509_46994, RNA1509_56445} {RNA1310_49427.1, RNA1509_56445} {RNA1509_56445, RNA815_26268.2} |
Berezikov Lab - 2020-2021 © ERIBA