Data search
Results for MligTC455_38863
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38863 | 111 | 2.31 | Mlig455_040209 | Neo: - Age: - |
Mlig455_040209 {REF} {Length: 3729} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=76.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.1]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=51.2, Expect=4e-06]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=188, Expect=2e-51]} {RNA1509_28802} {RNA1310_72279} {RNA815_52.2} |
Cumulative graph for MligTC455_38863
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.053 | 1.636 | 0.65162 | 1.00000 | |
| RegionR2 | -1.117 | 1.636 | 0.34130 | 0.73349 | |
| RegionR3 | 0.068 | 1.636 | 0.93544 | 1.00000 | |
| RegionR4 | 0.112 | 1.636 | 0.87747 | 1.00000 | |
| RegionR5 | 0.211 | 1.636 | 0.82450 | 1.00000 | |
| RegionR6 | 0.062 | 1.636 | 0.95262 | 1.00000 | |
| RegionR7 | -0.394 | 1.636 | 0.79358 | 1.00000 | |
| RegionR8 | 2.11 | 1.636 | 0.13162 | 0.66452 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.554 | 1.636 | 0.49820 | 1.00000 | |
| RegenerationR2 | 0.789 | 1.636 | 0.45370 | 0.84908 | |
| RegenerationR3 | -0.184 | 1.636 | 0.83011 | 0.99091 | |
| RegenerationR4 | -0.311 | 1.636 | 0.76338 | 0.97400 | |
| RegenerationR5 | 0.774 | 1.636 | 0.43180 | 0.81925 | |
| RegenerationR6 | -0.017 | 1.636 | 0.98136 | 1.00000 | |
| RegenerationBL | 0.182 | 1.636 | 0.88440 | 1.00000 | |
| RegenerationTP | -0.256 | 1.636 | 0.82241 | 1.00000 |
Genes with expression patterns similar to MligTC455_38863
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38863 | 111 | 2.31 | Mlig455_040209 | Neo: - Age: - |
5 | - | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_040209 {REF} {Length: 3729} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=76.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.1]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=51.2, Expect=4e-06]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=188, Expect=2e-51]} {RNA1509_28802} {RNA1310_72279} {RNA815_52.2} | |
| 2. | MligTC455_26679 | 67 | 1.4 | Mlig455_064775 | Neo: - Age: Up-Down-Down |
SDC2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_064775 {REF} {Length: 2105} {Pfam: Syndecan domain [PF01034.22, score=59.6]; Thyroglobulin type-1 repeat [PF00086.20, score=19.8]; Glycophorin A [PF01102.20, score=19.0]} {Human: ENSG00000169439, SDC2, syndecan 2, [RH, Score=62.0, Expect=7e-11]} {Mouse: ENSMUSG00000020592, Sdc1, syndecan 1, [RH, Score=60.5, Expect=9e-10]; ENSMUSG00000017009, Sdc4, syndecan 4, [RH, Score=60.5, Expect=3e-10]; ENSMUSG00000022261, Sdc2, syndecan 2, [RH, Score=58.5, Expect=1e-09]} {Smed: dd_Smed_v6_4546_0_1, dd_Smed_v6_4546_0_1, [RH, Score=63.5, Expect=7e-12]} {RNA1310_55436} {RNA815_23432} |
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