Data search
Results for MligTC455_26679
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_26679 | 67 | 1.40 | Mlig455_064775 | Neo: - Age: Up-Down-Down |
SDC2 | Mlig455_064775 {REF} {Length: 2105} {Pfam: Syndecan domain [PF01034.22, score=59.6]; Thyroglobulin type-1 repeat [PF00086.20, score=19.8]; Glycophorin A [PF01102.20, score=19.0]} {Human: ENSG00000169439, SDC2, syndecan 2, [RH, Score=62.0, Expect=7e-11]} {Mouse: ENSMUSG00000020592, Sdc1, syndecan 1, [RH, Score=60.5, Expect=9e-10]; ENSMUSG00000017009, Sdc4, syndecan 4, [RH, Score=60.5, Expect=3e-10]; ENSMUSG00000022261, Sdc2, syndecan 2, [RH, Score=58.5, Expect=1e-09]} {Smed: dd_Smed_v6_4546_0_1, dd_Smed_v6_4546_0_1, [RH, Score=63.5, Expect=7e-12]} {RNA1310_55436} {RNA815_23432} |
Cumulative graph for MligTC455_26679
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.471 | 1.237 | 0.99992 | 1.00000 | |
| RegionR2 | -3.609 | 1.237 | 0.99977 | 1.00000 | |
| RegionR3 | -0.2 | 1.237 | 0.89637 | 1.00000 | |
| RegionR4 | 6.97 | 1.237 | 0.00880 | 0.05541 | |
| RegionR5 | 2.339 | 1.237 | 0.05277 | 0.19502 | |
| RegionR6 | -2.35 | 1.237 | 0.99883 | 1.00000 | |
| RegionR7 | 0.537 | 1.237 | 0.96720 | 1.00000 | |
| RegionR8 | -6.158 | 1.237 | 0.99971 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.244 | 1.237 | 0.99984 | 1.00000 | |
| RegenerationR2 | -0.4 | 1.237 | 0.69105 | 0.95318 | |
| RegenerationR3 | -3.632 | 1.237 | 0.00673 | 0.14936 | |
| RegenerationR4 | -4.047 | 1.237 | 0.04486 | 0.34155 | |
| RegenerationR5 | -2.133 | 1.237 | 0.03775 | 0.32158 | |
| RegenerationR6 | -0.81 | 1.237 | 0.62211 | 0.88196 | |
| RegenerationBL | -1.025 | 1.237 | 1.00000 | 1.00000 | |
| RegenerationTP | -1.905 | 1.237 | 0.98478 | 1.00000 |
Genes with expression patterns similar to MligTC455_26679
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_26679 | 67 | 1.4 | Mlig455_064775 | Neo: - Age: Up-Down-Down |
SDC2 | 3 | 1.000 | - | 1.000 | - | - | 1.000 | Mlig455_064775 {REF} {Length: 2105} {Pfam: Syndecan domain [PF01034.22, score=59.6]; Thyroglobulin type-1 repeat [PF00086.20, score=19.8]; Glycophorin A [PF01102.20, score=19.0]} {Human: ENSG00000169439, SDC2, syndecan 2, [RH, Score=62.0, Expect=7e-11]} {Mouse: ENSMUSG00000020592, Sdc1, syndecan 1, [RH, Score=60.5, Expect=9e-10]; ENSMUSG00000017009, Sdc4, syndecan 4, [RH, Score=60.5, Expect=3e-10]; ENSMUSG00000022261, Sdc2, syndecan 2, [RH, Score=58.5, Expect=1e-09]} {Smed: dd_Smed_v6_4546_0_1, dd_Smed_v6_4546_0_1, [RH, Score=63.5, Expect=7e-12]} {RNA1310_55436} {RNA815_23432} |
| 2. | MligTC455_19294 | 35 | 0.73 | Mlig455_044403 | Neo: - Age: - Region-enriched R4: 4.059/0.01568 |
CLEC6A | 0.97 | - | - | 0.970 | - | - | - | Mlig455_044403 {REF} {Length: 1224} {Human: ENSG00000205846, CLEC6A, C-type lectin domain containing 6A, [Score=46.6, Expect=1e-05]} {RNA1310_49243} {RNA815_28288} |
| 3. | MligTC455_50770 | 48 | 1.01 | Mlig455_044275 | Neo: - Age: - |
0.968 | - | - | - | - | - | 0.968 | Mlig455_044275 {REF} {Length: 2754} {Pfam: Innexin [PF00876.20, score=406.3]} {Dmel: FBgn0085387, shakB, shaking B, [Score=120, Expect=1e-29]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=330, Expect=1e-109]} {Smed: dd_Smed_v6_11077_0_2, dd_Smed_v6_11077_0_2, [RH, Score=495, Expect=9e-173]} {RNA1509_20876} {RNA1310_23853} {RNA815_31193} | |
| 4. | MligTC455_21754 | 21 | 0.44 | Mlig455_021167 | Neo: - Age: Down-Up-Down |
0.961 | - | - | 0.961 | - | - | - | Mlig455_021167 {REF} {Length: 1412} {Pfam: F5/8 type C domain [PF00754.27, score=37.1]} {RNA1310_25631} {RNA815_14716} | |
| 5. | MligTC455_34066 | 149 | 3.1 | Mlig455_069292 | Neo: - Age: - |
0.96 | - | - | 0.960 | - | - | - | Mlig455_069292 {REF} {Length: 832} {NoTransDecoderORF} {RNA1509_20753} {RNA1310_16791} {RNA815_12674.1} | |
| 6. | MligTC455_38863 | 111 | 2.31 | Mlig455_040209 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_040209 {REF} {Length: 3729} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=76.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.1]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=51.2, Expect=4e-06]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=188, Expect=2e-51]} {RNA1509_28802} {RNA1310_72279} {RNA815_52.2} | |
| 7. | MligTC455_21325 | 36 | 0.75 | Mlig455_053949 | Neo: - |
SLC4A10 | 0.956 | - | - | 0.956 | - | - | - | Mlig455_053949 {REF} {Length: 5641} {TRANSSPLICED} {Pfam: HCO3- transporter family [PF00955.23, score=719.0]; Band 3 cytoplasmic domain [PF07565.15, score=297.5]; Sulfate permease family [PF00916.22, score=19.2]} {Human: ENSG00000144290, SLC4A10, solute carrier family 4 member 10, [Score=947, Expect=0.0]; ENSG00000050438, SLC4A8, solute carrier family 4 member 8, [Score=935, Expect=0.0]} {Mouse: ENSMUSG00000023032, Slc4a8, solute carrier family 4 (anion exchanger), member 8, [Score=946, Expect=0.0]; ENSMUSG00000026904, Slc4a10, solute carrier family 4, sodium bicarbonate cotransporter-like, member 10, [Score=946, Expect=0.0]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [Score=634, Expect=0.0]} {Celegans: WBGene00009920, abts-1, Anion exchange protein, [Score=612, Expect=0.0]} {Smed: dd_Smed_v6_3003_0_2, dd_Smed_v6_3003_0_2, [Score=1208, Expect=0.0]} {RNA1509_21197} {RNA1310_2601, RNA1509_21197} {RNA1509_21197, RNA815_7793.1} |
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