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Results for MligTC455_38915

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38915 841 17.53 Mlig455_062395

Neo: -

Age: Down-Down-Up

 ARAP1 Mlig455_062395 {REF} {Length: 5179} {TRANSSPLICED} {Pfam: Putative GTPase activating protein for Arf [PF01412.20, score=99.0]; RhoGAP domain [PF00620.29, score=92.6]; PH domain [PF00169.31, score=32.2]} {Human: ENSG00000186635, ARAP1, ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, [RH, Score=125, Expect=2e-28]} {Mouse: ENSMUSG00000032812, Arap1, ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, [RH, Score=117, Expect=7e-26]} {Dmel: FBgn0028509, CenG1A, Centaurin gamma 1A, [Score=84.3, Expect=5e-16]} {Celegans: WBGene00015418, pac-1, GTPase-activating protein pac-1, [Score=75.1, Expect=2e-13]} {Smed: dd_Smed_v6_8255_0_1, dd_Smed_v6_8255_0_1, [RH, Score=100, Expect=3e-21]} {RNA1509_33281, RNA1509_41352, RNA1509_51354, RNA1509_6804} {RNA1310_1934.1, RNA1509_33281, RNA1509_41352, RNA1509_51354} {RNA1509_33281, RNA1509_41352, RNA1509_51354, RNA815_698.1}

Cumulative graph for MligTC455_38915

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.239 4.303 0.80682 1.00000
RegionR2 -0.944 4.303 0.02691 0.18457
RegionR3 -0.229 4.303 0.51291 1.00000
RegionR4 0.937 4.303 0.03246 0.14369
RegionR5 0.324 4.303 0.32702 0.67097
RegionR6 0.247 4.303 0.47265 1.00000
RegionR7 -0.447 4.303 0.34617 0.98317
RegionR8 -0.128 4.303 0.82369 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.125 4.303 0.91976 1.00000
RegenerationR2 -0.335 4.303 0.38502 0.80500
RegenerationR3 -0.827 4.303 0.04428 0.36771
RegenerationR4 -0.715 4.303 0.08836 0.46636
RegenerationR5 -0.353 4.303 0.35604 0.76828
RegenerationR6 -1.027 4.303 0.01412 0.14631
RegenerationBL -1.147 4.303 0.02803 0.18554
RegenerationTP 0.021 4.303 0.96738 1.00000


Genes with expression patterns similar to MligTC455_38915

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38915 841 17.53 Mlig455_062395

Neo: -

Age: Down-Down-Up

 ARAP1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_062395 {REF} {Length: 5179} {TRANSSPLICED} {Pfam: Putative GTPase activating protein for Arf [PF01412.20, score=99.0]; RhoGAP domain [PF00620.29, score=92.6]; PH domain [PF00169.31, score=32.2]} {Human: ENSG00000186635, ARAP1, ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, [RH, Score=125, Expect=2e-28]} {Mouse: ENSMUSG00000032812, Arap1, ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, [RH, Score=117, Expect=7e-26]} {Dmel: FBgn0028509, CenG1A, Centaurin gamma 1A, [Score=84.3, Expect=5e-16]} {Celegans: WBGene00015418, pac-1, GTPase-activating protein pac-1, [Score=75.1, Expect=2e-13]} {Smed: dd_Smed_v6_8255_0_1, dd_Smed_v6_8255_0_1, [RH, Score=100, Expect=3e-21]} {RNA1509_33281, RNA1509_41352, RNA1509_51354, RNA1509_6804} {RNA1310_1934.1, RNA1509_33281, RNA1509_41352, RNA1509_51354} {RNA1509_33281, RNA1509_41352, RNA1509_51354, RNA815_698.1}
2. MligTC455_26422 558 11.63 Mlig455_006604

Neo: -

Age: Up-Down-Down

 RAPGEF6 1.748 0.793 - - - - 0.955 Mlig455_006604 {REF} {Length: 5327} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=127.5]; PDZ domain [PF17820.3, score=36.1]; RasGEF N-terminal motif [PF00618.22, score=30.2]; PDZ domain [PF00595.26, score=30.0]; Cyclic nucleotide-binding domain [PF00027.31, score=25.6]; Ras association (RalGDS/AF-6) domain [PF00788.25, score=24.0]; PDZ domain [PF13180.8, score=22.9]} {Human: ENSG00000158987, RAPGEF6, Rap guanine nucleotide exchange factor 6, [RH, Score=477, Expect=3e-145]; ENSG00000273217, AC008695.1, novel protein, [RH, Score=474, Expect=2e-142]; ENSG00000109756, RAPGEF2, Rap guanine nucleotide exchange factor 2, [RH, Score=474, Expect=2e-143]} {Mouse: ENSMUSG00000037533, Rapgef6, Rap guanine nucleotide exchange factor (GEF) 6, [RH, Score=478, Expect=4e-144]; ENSMUSG00000062232, Rapgef2, Rap guanine nucleotide exchange factor (GEF) 2, [RH, Score=474, Expect=9e-144]} {Dmel: FBgn0265778, PDZ-GEF, PDZ domain-containing guanine nucleotide exchange factor, [RH, Score=261, Expect=1e-70]} {Celegans: WBGene00004254, pxf-1, Rap guanine nucleotide exchange factor, [RH, Score=221, Expect=4e-58]} {Smed: dd_Smed_v6_4950_0_3, dd_Smed_v6_4950_0_3, [RH, Score=436, Expect=9e-130]} {RNA1509_33540} {RNA1310_804.1, RNA1509_33540} {RNA1509_33540, RNA815_1044}
3. MligTC455_52051 589 12.27 Mlig455_036567

Neo: -

Age: -

 0.978 - - - - - 0.978 Mlig455_036567 {REF} {Length: 2106} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=64.8]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=81.6, Expect=1e-19]} {RNA1509_31639, RNA1509_33026, RNA1509_42996, RNA1509_55550, RNA1509_55928} {RNA1310_15109.1, RNA1509_33026, RNA1509_42996, RNA1509_55550, RNA1509_55928} {RNA1509_33026, RNA1509_42996, RNA1509_55550, RNA1509_55928, RNA815_18238.1}
4. MligTC455_27546 1382 28.79 Mlig455_040738, Mlig455_040742, Mlig455_040743

Neo: -

Age: -

 NFKB2 0.966 - - - - - 0.966

Mlig455_040738 {REF} {Length: 1940} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=33.1]; Ankyrin repeats (many copies) [PF13857.8, score=32.0]; Ankyrin repeat [PF00023.32, score=29.8]; Ankyrin repeats (many copies) [PF13637.8, score=28.7]; Ankyrin repeat [PF13606.8, score=27.6]} {Human: ENSG00000077150, NFKB2, nuclear factor kappa B subunit 2, [Score=44.7, Expect=1e-05]; ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [Score=44.7, Expect=1e-05]; ENSG00000105887, MTPN, myotrophin, [Score=44.7, Expect=3e-06]} {Mouse: ENSMUSG00000029840, Mtpn, myotrophin, [Score=44.7, Expect=2e-06]; ENSMUSG00000026923, Notch1, notch 1, [Score=44.7, Expect=1e-05]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=44.7, Expect=4e-06]} {RNA1509_59566} {RNA1310_16451.2} {RNA815_14997}

Mlig455_040742 {REF} {Length: 1833} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=48.7]; Ankyrin repeats (many copies) [PF13857.8, score=31.0]; Ankyrin repeats (many copies) [PF13637.8, score=30.7]; Ankyrin repeat [PF00023.32, score=27.6]; Ankyrin repeat [PF13606.8, score=26.8]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=55.8, Expect=4e-08]} {RNA1509_59566} {RNA1310_16451.1} {RNA815_4150}

Mlig455_040743 {REF} {Length: 1833} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=48.7]; Ankyrin repeats (many copies) [PF13857.8, score=31.0]; Ankyrin repeats (many copies) [PF13637.8, score=30.7]; Ankyrin repeat [PF00023.32, score=27.6]; Ankyrin repeat [PF13606.8, score=26.8]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=55.8, Expect=4e-08]} {RNA1509_59566} {RNA1310_16451.1} {RNA815_4150}
5. MligTC455_21470 491 10.23 Mlig455_028994

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.236

 KCNMA1 0.959 - - 0.959 - - - Mlig455_028994 {REF} {Length: 4059} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=82.1]; Ion channel [PF07885.18, score=48.7]; Ion transport protein [PF00520.33, score=31.6]; TrkA-N domain [PF02254.20, score=27.3]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=484, Expect=1e-151]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=482, Expect=5e-151]} {Dmel: FBgn0003429, slo, slowpoke, [Score=479, Expect=1e-150]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=461, Expect=5e-144]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=490, Expect=3e-155]} {RNA1509_10617} {RNA1310_2480.1} {RNA815_984.1}
6. MligTC455_32782 762 15.86 Mlig455_040963, Mlig455_040976

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.278

Region-specific R4: 3.730

Region-enriched R4: 2.489/0.00000

 0.956 - - - 0.956 - -

Mlig455_040963 {REF} {Length: 1784} {tRNA: Pro(AGG), score=70.1} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=48.2]} {Smed: dd_Smed_v6_11577_0_1, dd_Smed_v6_11577_0_1, [RH, Score=191, Expect=2e-59]} {RNA1509_15984} {RNA1310_6692, RNA1509_15984} {RNA1509_15984, RNA815_14459}

Mlig455_040976 {REF} {Length: 1698} {tRNA: Pro(AGG), score=70.1} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=48.4]} {Smed: dd_Smed_v6_2174_0_1, dd_Smed_v6_2174_0_1, [RH, Score=189, Expect=2e-58]} {RNA1509_15984} {RNA1310_6692} {RNA815_14459}
7. MligTC455_43869 981 20.45 Mlig455_019291

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.326

 0.954 - - - - - 0.954 Mlig455_019291 {REF} {Length: 3366} {Pfam: DoxX-like family [PF13564.8, score=24.1]} {Mouse: ENSMUSG00000070737, Tmem35b, transmembrane protein 35B, [RH, Score=48.5, Expect=5e-07]} {Smed: dd_Smed_v6_7600_0_1, dd_Smed_v6_7600_0_1, [RH, Score=105, Expect=1e-28]} {RNA1509_10336} {RNA1310_10966} {RNA815_23403}
8. MligTC455_25017 1155 24.07 Mlig455_068054

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.373

 TRIM6 0.95 - - - - - 0.950 Mlig455_068054 {REF} {Length: 2760} {Pfam: RING-type zinc-finger [PF13445.8, score=39.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=33.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=28.0]; NHL repeat [PF01436.23, score=25.5]; Ring finger domain [PF13639.8, score=20.3]; Exonuclease VII, large subunit [PF02601.17, score=19.9]; zinc-RING finger domain [PF14634.8, score=19.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.1]} {Human: ENSG00000121236, TRIM6, tripartite motif containing 6, [RH, Score=64.3, Expect=3e-10]; ENSG00000258588, TRIM6-TRIM34, TRIM6-TRIM34 readthrough, [RH, Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000072244, Trim6, tripartite motif-containing 6, [RH, Score=57.0, Expect=4e-08]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=48.9, Expect=9e-06]} {RNA1509_9450} {RNA1310_3683.1} {RNA815_2165}

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