Data search
Results for MligTC455_25017
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25017 | 1155 | 24.07 | Mlig455_068054 | Neo: - |
TRIM6 | Mlig455_068054 {REF} {Length: 2760} {Pfam: RING-type zinc-finger [PF13445.8, score=39.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=33.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=28.0]; NHL repeat [PF01436.23, score=25.5]; Ring finger domain [PF13639.8, score=20.3]; Exonuclease VII, large subunit [PF02601.17, score=19.9]; zinc-RING finger domain [PF14634.8, score=19.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.1]} {Human: ENSG00000121236, TRIM6, tripartite motif containing 6, [RH, Score=64.3, Expect=3e-10]; ENSG00000258588, TRIM6-TRIM34, TRIM6-TRIM34 readthrough, [RH, Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000072244, Trim6, tripartite motif-containing 6, [RH, Score=57.0, Expect=4e-08]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=48.9, Expect=9e-06]} {RNA1509_9450} {RNA1310_3683.1} {RNA815_2165} |
Cumulative graph for MligTC455_25017
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.745 | 4.729 | 0.32070 | 0.96985 | |
| RegionR2 | 0.609 | 4.729 | 0.08764 | 0.36359 | |
| RegionR3 | 0.555 | 4.729 | 0.04373 | 0.36512 | |
| RegionR4 | -0.936 | 4.729 | 0.00350 | 0.02748 | |
| RegionR5 | -0.099 | 4.729 | 0.70238 | 1.00000 | |
| RegionR6 | 0.053 | 4.729 | 0.85557 | 1.00000 | |
| RegionR7 | -0.313 | 4.729 | 0.46293 | 1.00000 | |
| RegionR8 | 0.875 | 4.729 | 0.05039 | 0.44031 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.5 | 4.729 | 0.63975 | 1.00000 | |
| RegenerationR2 | 0.122 | 4.729 | 0.68530 | 0.95092 | |
| RegenerationR3 | -0.114 | 4.729 | 0.72456 | 0.95617 | |
| RegenerationR4 | 0.266 | 4.729 | 0.41967 | 0.82565 | |
| RegenerationR5 | 0.216 | 4.729 | 0.47588 | 0.84467 | |
| RegenerationR6 | 0.296 | 4.729 | 0.37880 | 0.72023 | |
| RegenerationBL | 0.269 | 4.729 | 0.48881 | 0.85380 | |
| RegenerationTP | 0.577 | 4.729 | 0.15796 | 0.58561 |
Genes with expression patterns similar to MligTC455_25017
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25017 | 1155 | 24.07 | Mlig455_068054 | Neo: - |
TRIM6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_068054 {REF} {Length: 2760} {Pfam: RING-type zinc-finger [PF13445.8, score=39.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=33.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=28.0]; NHL repeat [PF01436.23, score=25.5]; Ring finger domain [PF13639.8, score=20.3]; Exonuclease VII, large subunit [PF02601.17, score=19.9]; zinc-RING finger domain [PF14634.8, score=19.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.1]} {Human: ENSG00000121236, TRIM6, tripartite motif containing 6, [RH, Score=64.3, Expect=3e-10]; ENSG00000258588, TRIM6-TRIM34, TRIM6-TRIM34 readthrough, [RH, Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000072244, Trim6, tripartite motif-containing 6, [RH, Score=57.0, Expect=4e-08]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=48.9, Expect=9e-06]} {RNA1509_9450} {RNA1310_3683.1} {RNA815_2165} |
| 2. | MligTC455_16284 | 1861 | 38.76 | Mlig455_054445, Mlig455_054474 | Neo: - Age: Down-Up-Down |
2.72 | 0.903 | - | - | - | 0.864 | 0.953 | Mlig455_054445 {REF} {Length: 1076} {RNA1509_29075} {RNA1310_15702.1} {RNA815_17368} Mlig455_054474 {REF} {Length: 1184} {RNA1509_29075} {RNA1310_15702.1} {RNA815_17368} |
|
| 3. | MligTC455_28862 | 1769 | 36.85 | Mlig455_001992, Mlig455_002087, Mlig455_002195 | Neo: - Age: - |
MFSD1 | 2.667 | - | - | - | 0.839 | 0.950 | 0.878 | Mlig455_001992 {REF} {Length: 4251} {TRANSSPLICED} {Pfam: RNA polymerase Rpc34 subunit [PF05158.14, score=161.3]; Major Facilitator Superfamily [PF07690.18, score=129.7]; Sugar-specific transcriptional regulator TrmB [PF01978.21, score=22.5]} {Human: ENSG00000118855, MFSD1, major facilitator superfamily domain containing 1, [RH, Score=446, Expect=7e-150]} {Mouse: ENSMUSG00000027775, Mfsd1, major facilitator superfamily domain containing 1, [RH, Score=468, Expect=1e-158]} {Dmel: FBgn0031636, CG12194, [RH, Score=448, Expect=1e-150]} {Celegans: WBGene00021112, W09C3.4, Probable DNA-directed RNA polymerase III subunit RPC6, [Score=120, Expect=8e-30]} {Smed: dd_Smed_v6_1829_0_1, dd_Smed_v6_1829_0_1, [RH, Score=516, Expect=2e-177]} {RNA1509_38587, RNA1509_5400} {RNA1310_9978.1, RNA1509_38587} {RNA1509_38587, RNA815_3138.1} Mlig455_002087 {REF} {Length: 4992} {TRANSSPLICED} {Pfam: RNA polymerase Rpc34 subunit [PF05158.14, score=161.3]; Major Facilitator Superfamily [PF07690.18, score=129.7]; Sugar-specific transcriptional regulator TrmB [PF01978.21, score=22.5]} {Human: ENSG00000118855, MFSD1, major facilitator superfamily domain containing 1, [RH, Score=446, Expect=7e-150]} {Mouse: ENSMUSG00000027775, Mfsd1, major facilitator superfamily domain containing 1, [RH, Score=468, Expect=1e-158]} {Dmel: FBgn0031636, CG12194, [RH, Score=448, Expect=1e-150]} {Celegans: WBGene00021112, W09C3.4, Probable DNA-directed RNA polymerase III subunit RPC6, [Score=120, Expect=8e-30]} {Smed: dd_Smed_v6_1829_0_1, dd_Smed_v6_1829_0_1, [RH, Score=516, Expect=2e-177]} {RNA1509_45363} {RNA1310_9978.1} {RNA815_3138.1} Mlig455_002195 {REF} {Length: 4183} {TRANSSPLICED} {Pfam: RNA polymerase Rpc34 subunit [PF05158.14, score=161.1]; Major Facilitator Superfamily [PF07690.18, score=129.7]; Sugar-specific transcriptional regulator TrmB [PF01978.21, score=22.4]} {Human: ENSG00000118855, MFSD1, major facilitator superfamily domain containing 1, [RH, Score=446, Expect=7e-150]} {Mouse: ENSMUSG00000027775, Mfsd1, major facilitator superfamily domain containing 1, [RH, Score=468, Expect=2e-158]} {Dmel: FBgn0031636, CG12194, [RH, Score=448, Expect=1e-150]} {Celegans: WBGene00021112, W09C3.4, Probable DNA-directed RNA polymerase III subunit RPC6, [Score=120, Expect=7e-30]} {Smed: dd_Smed_v6_1829_0_1, dd_Smed_v6_1829_0_1, [RH, Score=516, Expect=1e-177]} {RNA1509_45363} {RNA1310_9978.1} {RNA815_3138.1} |
| 4. | MligTC455_42451 | 1076 | 22.41 | Mlig455_041813 | Neo: - Age: - |
MRAS | 0.977 | - | - | - | 0.977 | - | - | Mlig455_041813 {REF} {Length: 1725} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=175.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=70.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=37.2]; ADP-ribosylation factor family [PF00025.23, score=36.2]; 50S ribosome-binding GTPase [PF01926.25, score=22.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.0]} {Human: ENSG00000158186, MRAS, muscle RAS oncogene homolog, [RH, Score=238, Expect=1e-79]} {Mouse: ENSMUSG00000032470, Mras, muscle and microspikes RAS, [RH, Score=237, Expect=1e-79]} {Dmel: FBgn0003206, Ras64B, Ras oncogene at 64B, [Score=176, Expect=6e-56]} {Celegans: WBGene00004311, ras-2, GTP binding protein; R-RAS related, [RH, Score=240, Expect=4e-81]} {Smed: dd_Smed_v6_8100_0_2, dd_Smed_v6_8100_0_2, [RH, Score=207, Expect=4e-68]} {RNA1509_30166, RNA1509_49288, RNA1509_55541, RNA1509_9155} {RNA1310_17480.1, RNA1509_30166, RNA1509_49288, RNA1509_55541, RNA1509_9155} {RNA1509_30166, RNA1509_49288, RNA1509_55541, RNA1509_9155, RNA815_6725.1} |
| 5. | MligTC455_52051 | 589 | 12.27 | Mlig455_036567 | Neo: - Age: - |
0.969 | - | - | - | - | - | 0.969 | Mlig455_036567 {REF} {Length: 2106} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=64.8]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=81.6, Expect=1e-19]} {RNA1509_31639, RNA1509_33026, RNA1509_42996, RNA1509_55550, RNA1509_55928} {RNA1310_15109.1, RNA1509_33026, RNA1509_42996, RNA1509_55550, RNA1509_55928} {RNA1509_33026, RNA1509_42996, RNA1509_55550, RNA1509_55928, RNA815_18238.1} | |
| 6. | MligTC455_32369 | 589 | 12.27 | Mlig455_011336 | Neo: - Age: logFC(26M/2M)=-0.394 |
0.967 | - | - | - | - | - | 0.967 | Mlig455_011336 {REF} {Length: 3023} {RNA1509_9596} {RNA1310_1782.1} {RNA815_19685.1} | |
| 7. | MligTC455_20904 | 878 | 18.3 | Mlig455_049876 | Neo: - Age: - Regeneration-downregulated BL: -1.988 Regeneration-depleted BL: -1.988 |
SLC4A8 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_049876 {REF} {Length: 5552} {TRANSSPLICED} {Pfam: HCO3- transporter family [PF00955.23, score=710.8]; Band 3 cytoplasmic domain [PF07565.15, score=281.6]} {Human: ENSG00000050438, SLC4A8, solute carrier family 4 member 8, [Score=965, Expect=0.0]} {Mouse: ENSMUSG00000023032, Slc4a8, solute carrier family 4 (anion exchanger), member 8, [Score=960, Expect=0.0]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [Score=648, Expect=0.0]} {Celegans: WBGene00009920, abts-1, Anion exchange protein, [Score=601, Expect=0.0]} {Smed: dd_Smed_v6_3003_0_2, dd_Smed_v6_3003_0_2, [RH, Score=1195, Expect=0.0]} {RNA1509_25288, RNA1509_5194} {RNA1310_6943, RNA1509_25288, RNA1509_5194} {RNA1509_25288, RNA1509_5194, RNA815_5130} |
| 8. | MligTC455_50928 | 1465 | 30.53 | Mlig455_048165 | Neo: - Age: - |
MARCH5 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_048165 {REF} {Length: 2347} {TRANSSPLICED} {Pfam: RING-variant domain [PF12906.9, score=46.7]} {Human: ENSG00000198060, MARCH5, membrane associated ring-CH-type finger 5, [RH, Score=294, Expect=1e-99]} {Mouse: ENSMUSG00000111123, March5, membrane-associated ring finger (C3HC4) 5, [RH, Score=294, Expect=9e-100]; ENSMUSG00000023307, March5, membrane-associated ring finger (C3HC4) 5, [RH, Score=294, Expect=9e-100]} {Dmel: FBgn0037242, CG9855, [RH, Score=267, Expect=9e-88]} {Celegans: WBGene00010913, M110.3, [RH, Score=45.4, Expect=9e-06]} {Smed: dd_Smed_v6_4602_0_1, dd_Smed_v6_4602_0_1, [RH, Score=257, Expect=3e-85]} {RNA1509_13617, RNA1509_16278, RNA1509_19987, RNA1509_25398, RNA1509_26839, RNA1509_35549} {RNA1310_1837.3, RNA1509_13617, RNA1509_16278, RNA1509_19987, RNA1509_25398, RNA1509_26839, RNA1509_35549} {RNA1509_13617, RNA1509_16278, RNA1509_19987, RNA1509_25398, RNA1509_26839, RNA1509_35549, RNA815_13330} |
| 9. | MligTC455_45825 | 525 | 10.94 | Mlig455_062343 | Neo: - Age: - |
ZDHHC4 | 0.954 | 0.954 | - | - | - | - | - | Mlig455_062343 {REF} {Length: 1370} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=102.9]} {Human: ENSG00000136247, ZDHHC4, zinc finger DHHC-type containing 4, [RH, Score=136, Expect=3e-36]} {Mouse: ENSMUSG00000001844, Zdhhc4, zinc finger, DHHC domain containing 4, [RH, Score=151, Expect=4e-42]} {Dmel: FBgn0260941, app, approximated, [Score=71.6, Expect=2e-13]} {Celegans: WBGene00012718, dhhc-8, Palmitoyltransferase, [Score=71.6, Expect=2e-13]} {Smed: dd_Smed_v6_7355_0_1, dd_Smed_v6_7355_0_1, [RH, Score=209, Expect=1e-65]} {RNA1509_14912} {RNA1310_23324, RNA1509_14912} {RNA1509_14912, RNA815_11089.1} |
| 10. | MligTC455_50246 | 420 | 8.75 | Mlig455_056379 | Neo: - Age: Down-Up-Up |
0.953 | - | - | - | - | - | 0.953 | Mlig455_056379 {REF} {Length: 768} {NoTransDecoderORF} {RNA1509_21100} {RNA1310_47245} {RNA815_25700} | |
| 11. | MligTC455_52141 | 35 | 0.72 | Mlig455_003641 | Neo: - Age: logFC(26M/2M)=-0.676 |
C17orf98 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_003641 {REF} {Length: 1658} {Pfam: Domain of unknown function (DUF4542) [PF15075.8, score=116.7]} {Human: ENSG00000276913, C17orf98, chromosome 17 open reading frame 98, [RH, Score=98.2, Expect=3e-25]; ENSG00000275489, C17orf98, chromosome 17 open reading frame 98, [RH, Score=98.2, Expect=3e-25]} {Mouse: ENSMUSG00000018543, 1700001P01Rik, RIKEN cDNA 1700001P01 gene, [RH, Score=99.4, Expect=1e-25]} {Smed: dd_Smed_v6_9687_0_1, dd_Smed_v6_9687_0_1, [Score=137, Expect=9e-41]} {RNA1509_4709} {RNA1310_42383} {RNA815_47976} |
| 12. | MligTC455_54046 | 1759 | 36.65 | Mlig455_007994 | Neo: - Age: - |
TAF10 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_007994 {REF} {Length: 1736} {TRANSSPLICED} {Pfam: Transcription initiation factor TFIID 23-30kDa subunit [PF03540.15, score=83.5]} {Human: ENSG00000166337, TAF10, TATA-box binding protein associated factor 10, [RH, Score=120, Expect=4e-34]} {Mouse: ENSMUSG00000043866, Taf10, TATA-box binding protein associated factor 10, [RH, Score=120, Expect=2e-34]} {Dmel: FBgn0026324, Taf10b, TBP-associated factor 10b, [RH, Score=96.7, Expect=6e-26]} {Celegans: WBGene00006392, taf-10, Transcription initiation factor TFIID subunit 10, [RH, Score=67.0, Expect=2e-14]} {Smed: dd_Smed_v6_7424_0_1, dd_Smed_v6_7424_0_1, [RH, Score=84.0, Expect=2e-21]} {RNA1509_11017} {RNA1310_30152, RNA1509_11017} {RNA1509_11017, RNA815_55122} |
| 13. | MligTC455_46139 | 983 | 20.47 | Mlig455_002906 | Neo: - Age: - Region-enriched R4: 1.656/0.03277 |
TMUB1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_002906 {REF} {Length: 3194} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=32.7]} {Human: ENSG00000164897, TMUB1, transmembrane and ubiquitin like domain containing 1, [RH, Score=76.6, Expect=3e-15]} {Mouse: ENSMUSG00000028958, Tmub1, transmembrane and ubiquitin-like domain containing 1, [RH, Score=79.3, Expect=3e-16]} {Smed: dd_Smed_v6_5590_0_1, dd_Smed_v6_5590_0_1, [RH, Score=132, Expect=3e-35]} {RNA1509_27877, RNA1509_30638, RNA1509_43728, RNA1509_5737} {RNA1310_3418.1, RNA1509_27877, RNA1509_30638, RNA1509_43728, RNA1509_5737} {RNA1509_27877, RNA1509_30638, RNA1509_43728, RNA1509_5737, RNA815_1023} |
| 14. | MligTC455_24872 | 30 | 0.63 | Mlig455_003960 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_003960 {REF} {Length: 1913} {RNA1509_42238} {RNA1310_22279} {RNA815_57577} | |
| 15. | MligTC455_38915 | 841 | 17.53 | Mlig455_062395 | Neo: - Age: Down-Down-Up |
ARAP1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_062395 {REF} {Length: 5179} {TRANSSPLICED} {Pfam: Putative GTPase activating protein for Arf [PF01412.20, score=99.0]; RhoGAP domain [PF00620.29, score=92.6]; PH domain [PF00169.31, score=32.2]} {Human: ENSG00000186635, ARAP1, ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, [RH, Score=125, Expect=2e-28]} {Mouse: ENSMUSG00000032812, Arap1, ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, [RH, Score=117, Expect=7e-26]} {Dmel: FBgn0028509, CenG1A, Centaurin gamma 1A, [Score=84.3, Expect=5e-16]} {Celegans: WBGene00015418, pac-1, GTPase-activating protein pac-1, [Score=75.1, Expect=2e-13]} {Smed: dd_Smed_v6_8255_0_1, dd_Smed_v6_8255_0_1, [RH, Score=100, Expect=3e-21]} {RNA1509_33281, RNA1509_41352, RNA1509_51354, RNA1509_6804} {RNA1310_1934.1, RNA1509_33281, RNA1509_41352, RNA1509_51354} {RNA1509_33281, RNA1509_41352, RNA1509_51354, RNA815_698.1} |
| 16. | MligTC455_40486 | 234 | 4.87 | Mlig455_043769 | Neo: - Age: logFC(26M/2M)=-0.327 |
0.95 | 0.950 | - | - | - | - | - | Mlig455_043769 {REF} {Length: 6309} {Pfam: C2 domain in Dock180 and Zizimin proteins [PF14429.8, score=34.3]} {Mouse: ENSMUSG00000035954, Dock4, dedicator of cytokinesis 4, [Score=52.8, Expect=4e-06]} {RNA1509_19446} {RNA1310_1320, RNA1509_19446} {RNA1509_19446, RNA815_27032} |
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