Data search
Results for MligTC455_38960
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38960 | 1032 | 21.51 | Mlig455_042351 | Neo: - Age: Up-Down-Up |
PRPF40A | Mlig455_042351 {REF} {Length: 3946} {TRANSSPLICED} {Pfam: FF domain [PF01846.21, score=68.4]} {Human: ENSG00000196504, PRPF40A, pre-mRNA processing factor 40 homolog A, [Score=229, Expect=1e-65]; ENSG00000110844, PRPF40B, pre-mRNA processing factor 40 homolog B, [Score=222, Expect=3e-63]} {Mouse: ENSMUSG00000061136, Prpf40a, pre-mRNA processing factor 40A, [Score=229, Expect=6e-66]; ENSMUSG00000023007, Prpf40b, pre-mRNA processing factor 40B, [Score=222, Expect=2e-63]} {Dmel: FBgn0031492, CG3542, [Score=210, Expect=1e-59]} {Celegans: WBGene00014218, ZK1098.1, WW domain-containing protein ZK1098.1, [Score=169, Expect=2e-47]} {Smed: dd_Smed_v6_1909_1_1, dd_Smed_v6_1909_1_1, [Score=234, Expect=4e-69]} {RNA1509_33193, RNA1509_4399} {RNA1310_5111, RNA1509_33193} {RNA1509_33193, RNA815_7882} |
Cumulative graph for MligTC455_38960
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.781 | 4.718 | 0.45656 | 1.00000 | |
| RegionR2 | 0.334 | 4.718 | 0.39288 | 0.78749 | |
| RegionR3 | -0.16 | 4.718 | 0.62982 | 1.00000 | |
| RegionR4 | 0.233 | 4.718 | 0.53145 | 0.85542 | |
| RegionR5 | 0.343 | 4.718 | 0.22603 | 0.53053 | |
| RegionR6 | 0.143 | 4.718 | 0.66000 | 1.00000 | |
| RegionR7 | 0.055 | 4.718 | 0.89771 | 1.00000 | |
| RegionR8 | -0.167 | 4.718 | 0.76486 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.762 | 4.718 | 0.11979 | 0.84939 | |
| RegenerationR2 | 0.326 | 4.718 | 0.28556 | 0.72847 | |
| RegenerationR3 | 0.51 | 4.718 | 0.14899 | 0.57803 | |
| RegenerationR4 | 0.174 | 4.718 | 0.62048 | 0.92089 | |
| RegenerationR5 | 0.271 | 4.718 | 0.38233 | 0.78818 | |
| RegenerationR6 | 0.681 | 4.718 | 0.04508 | 0.26530 | |
| RegenerationBL | 0.923 | 4.718 | 0.02128 | 0.15837 | |
| RegenerationTP | -0.108 | 4.718 | 0.82576 | 1.00000 |
Genes with expression patterns similar to MligTC455_38960
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38960 | 1032 | 21.51 | Mlig455_042351 | Neo: - Age: Up-Down-Up |
PRPF40A | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042351 {REF} {Length: 3946} {TRANSSPLICED} {Pfam: FF domain [PF01846.21, score=68.4]} {Human: ENSG00000196504, PRPF40A, pre-mRNA processing factor 40 homolog A, [Score=229, Expect=1e-65]; ENSG00000110844, PRPF40B, pre-mRNA processing factor 40 homolog B, [Score=222, Expect=3e-63]} {Mouse: ENSMUSG00000061136, Prpf40a, pre-mRNA processing factor 40A, [Score=229, Expect=6e-66]; ENSMUSG00000023007, Prpf40b, pre-mRNA processing factor 40B, [Score=222, Expect=2e-63]} {Dmel: FBgn0031492, CG3542, [Score=210, Expect=1e-59]} {Celegans: WBGene00014218, ZK1098.1, WW domain-containing protein ZK1098.1, [Score=169, Expect=2e-47]} {Smed: dd_Smed_v6_1909_1_1, dd_Smed_v6_1909_1_1, [Score=234, Expect=4e-69]} {RNA1509_33193, RNA1509_4399} {RNA1310_5111, RNA1509_33193} {RNA1509_33193, RNA815_7882} |
| 2. | MligTC455_49190 | 1159 | 24.15 | Mlig455_022216 | Neo: - Age: - |
CDK19 | 3.348 | 0.780 | - | 0.757 | 0.955 | 0.856 | - | Mlig455_022216 {REF} {Length: 1960} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=197.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=87.1]} {Human: ENSG00000155111, CDK19, cyclin dependent kinase 19, [RH, Score=578, Expect=0.0]; ENSG00000132964, CDK8, cyclin dependent kinase 8, [RH, Score=568, Expect=0.0]} {Mouse: ENSMUSG00000038481, Cdk19, cyclin-dependent kinase 19, [RH, Score=577, Expect=0.0]; ENSMUSG00000029635, Cdk8, cyclin-dependent kinase 8, [RH, Score=568, Expect=0.0]} {Dmel: FBgn0015618, Cdk8, Cyclin-dependent kinase 8, [RH, Score=568, Expect=0.0]} {Celegans: WBGene00000409, cdk-8, Cyclin-dependent kinase 8, [RH, Score=461, Expect=1e-157]} {Smed: dd_Smed_v6_6004_0_2, dd_Smed_v6_6004_0_2, [RH, Score=521, Expect=0.0]} {RNA1509_7227} {RNA1310_14524, RNA1509_7227} {RNA1509_7227, RNA815_4672.1} |
| 3. | MligTC455_30629 | 803 | 16.73 | Mlig455_066612 | Neo: - Age: - Region-enriched R5: 1.551/0.02318 |
GALK1 | 1.846 | - | - | - | 0.955 | - | 0.891 | Mlig455_066612 {REF} {Length: 1768} {TRANSSPLICED} {Pfam: Galactokinase galactose-binding signature [PF10509.11, score=75.3]; GHMP kinases C terminal [PF08544.15, score=50.8]; GHMP kinases N terminal domain [PF00288.28, score=47.2]} {Human: ENSG00000108479, GALK1, galactokinase 1, [RH, Score=367, Expect=1e-124]} {Mouse: ENSMUSG00000020766, Galk1, galactokinase 1, [RH, Score=365, Expect=4e-124]} {Dmel: FBgn0263199, Galk, Galactokinase, [Score=81.6, Expect=2e-16]} {Celegans: WBGene00006461, tag-96, [Score=101, Expect=3e-23]} {Smed: dd_Smed_v6_5394_0_1, dd_Smed_v6_5394_0_1, [RH, Score=335, Expect=1e-112]} {RNA1509_16527, RNA1509_24089, RNA1509_48275} {RNA1310_15048, RNA1509_16527, RNA1509_24089, RNA1509_48275} {RNA1509_16527, RNA1509_24089, RNA1509_48275, RNA815_9890} |
| 4. | MligTC455_16242 | 233 | 4.85 | Mlig455_009696 | Neo: - Age: - |
1.725 | - | - | - | 0.963 | - | 0.762 | Mlig455_009696 {REF} {Length: 2743} {TRANSSPLICED} {RNA1509_56072} {RNA1310_35648.1} {RNA815_22277} | |
| 5. | MligTC455_31540 | 586 | 12.21 | Mlig455_009199 | Neo: Int S/G2/M Age: Up-Down-Down |
CPSF1 | 0.982 | - | - | - | 0.982 | - | - | Mlig455_009199 {REF} {Length: 7327} {TRANSSPLICED} {Pfam: CPSF A subunit region [PF03178.17, score=217.3]; Mono-functional DNA-alkylating methyl methanesulfonate N-term [PF10433.11, score=80.2]} {Human: ENSG00000071894, CPSF1, cleavage and polyadenylation specific factor 1, [RH, Score=567, Expect=4e-173]; ENSG00000285049, CPSF1, cleavage and polyadenylation specific factor 1, [RH, Score=567, Expect=4e-173]} {Mouse: ENSMUSG00000034022, Cpsf1, cleavage and polyadenylation specific factor 1, [RH, Score=570, Expect=3e-174]} {Dmel: FBgn0024698, Cpsf160, Cleavage and polyadenylation specificity factor 160, [RH, Score=473, Expect=8e-140]} {Celegans: WBGene00022301, cpsf-1, Probable cleavage and polyadenylation specificity factor subunit 1, [RH, Score=364, Expect=5e-103]} {Smed: dd_Smed_v6_8644_0_1, dd_Smed_v6_8644_0_1, [RH, Score=468, Expect=1e-137]} {RNA1509_23949, RNA1509_5909} {RNA1310_503.1, RNA1509_23949, RNA1509_5909} {RNA1509_23949, RNA1509_5909, RNA815_575.1} |
| 6. | MligTC455_09367 | 497 | 10.36 | Mlig455_059870 | Neo: - Age: Down-Up-Up |
0.97 | - | - | - | - | 0.970 | - | Mlig455_059870 {REF} {Length: 1965} {Pfam: Ring finger domain [PF13639.8, score=34.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=26.5]; RING-type zinc-finger [PF13445.8, score=25.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.0]} {RNA1509_34007} {RNA1310_15024, RNA1509_34007} {RNA1509_34007, RNA815_7070} | |
| 7. | MligTC455_43209 | 379 | 7.89 | Mlig455_016249 | Neo: - Age: Down-Up-Down |
TAF9 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_016249 {REF} {Length: 2000} {TRANSSPLICED} {Pfam: Transcription initiation factor IID, 31kD subunit [PF02291.17, score=132.0]; CENP-S protein [PF15630.8, score=31.7]; Bromodomain associated [PF07524.15, score=23.9]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=23.6]} {Human: ENSG00000276463, TAF9, TATA-box binding protein associated factor 9, [RH, Score=135, Expect=6e-39]; ENSG00000273841, TAF9, TATA-box binding protein associated factor 9, [RH, Score=135, Expect=6e-39]; ENSG00000187325, TAF9B, TATA-box binding protein associated factor 9b, [RH, Score=134, Expect=2e-38]} {Mouse: ENSMUSG00000078941, Ak6, adenylate kinase 6, [RH, Score=135, Expect=4e-39]; ENSMUSG00000052293, Taf9, TATA-box binding protein associated factor 9, [RH, Score=135, Expect=4e-39]; ENSMUSG00000047242, Taf9b, TATA-box binding protein associated factor 9B, [RH, Score=132, Expect=4e-38]} {Dmel: FBgn0000617, e(y)1, enhancer of yellow 1, [RH, Score=128, Expect=4e-36]} {RNA1509_26456, RNA1509_41155} {RNA1310_14966.2, RNA1509_26456, RNA1509_41155} {RNA1509_26456, RNA1509_41155, RNA815_17644} |
| 8. | MligTC455_39898 | 738 | 15.38 | Mlig455_030521 | Neo: Irradiation Age: - Region-enriched R4: 2.375/0.00002 |
ZNF569 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_030521 {REF} {Length: 2607} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=113.0]; Zinc finger, C2H2 type [PF00096.28, score=73.4]; C2H2-type zinc finger [PF13894.8, score=62.0]; Zinc-finger of C2H2 type [PF12874.9, score=25.8]; C2H2-type zinc finger [PF13912.8, score=22.8]; zinc-finger of a C2HC-type [PF13913.8, score=22.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=21.9]} {Human: ENSG00000196437, ZNF569, zinc finger protein 569, [Score=167, Expect=2e-44]; ENSG00000278129, ZNF8, zinc finger protein 8, [Score=167, Expect=5e-45]; ENSG00000160961, ZNF333, zinc finger protein 333, [Score=166, Expect=4e-44]; ENSG00000171827, ZNF570, zinc finger protein 570, [Score=164, Expect=6e-44]; ENSG00000130182, ZSCAN10, zinc finger and SCAN domain containing 10, [Score=163, Expect=2e-43]; ENSG00000188321, ZNF559, zinc finger protein 559, [Score=162, Expect=3e-43]; ENSG00000175691, ZNF77, zinc finger protein 77, [Score=162, Expect=3e-43]; ENSG00000187801, ZFP69B, ZFP69 zinc finger protein B, [Score=162, Expect=1e-43]; ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=160, Expect=5e-43]; ENSG00000172006, ZNF554, zinc finger protein 554, [Score=160, Expect=8e-43]; ENSG00000189042, ZNF567, zinc finger protein 567, [Score=159, Expect=6e-42]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=159, Expect=1e-41]; ENSG00000274349, ZNF658, zinc finger protein 658, [Score=159, Expect=5e-41]; ENSG00000167384, ZNF180, zinc finger protein 180, [Score=159, Expect=9e-42]; ENSG00000268696, ZNF723, zinc finger protein 723, [Score=159, Expect=1e-42]; ENSG00000170100, ZNF778, zinc finger protein 778, [Score=159, Expect=1e-41]; ENSG00000196597, ZNF782, zinc finger protein 782, [Score=159, Expect=1e-41]; ENSG00000198440, ZNF583, zinc finger protein 583, [Score=159, Expect=5e-42]} {Mouse: ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=170, Expect=2e-45]; ENSMUSG00000066880, Zfp617, zinc finger protein 617, [Score=169, Expect=5e-46]; ENSMUSG00000059975, Zfp74, zinc finger protein 74, [Score=167, Expect=2e-44]; ENSMUSG00000032425, Zfp949, zinc finger protein 949, [Score=166, Expect=1e-44]; ENSMUSG00000064141, Zfp69, zinc finger protein 69, [Score=165, Expect=3e-44]; ENSMUSG00000060397, Zfp128, zinc finger protein 128, [Score=165, Expect=2e-44]; ENSMUSG00000031079, Zfp300, zinc finger protein 300, [Score=164, Expect=7e-44]; ENSMUSG00000068962, Zfp114, zinc finger protein 114, [Score=163, Expect=1e-43]; ENSMUSG00000022526, Zfp251, zinc finger protein 251, [Score=162, Expect=4e-43]; ENSMUSG00000060510, Zfp266, zinc finger protein 266, [Score=162, Expect=3e-43]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=162, Expect=2e-42]; ENSMUSG00000091474, 2610021A01Rik, RIKEN cDNA 2610021A01 gene, [Score=162, Expect=1e-42]} {Dmel: FBgn0038301, CG6654, [Score=159, Expect=3e-42]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=137, Expect=1e-37]} {Smed: dd_Smed_v6_26394_0_1, dd_Smed_v6_26394_0_1, [Score=141, Expect=4e-39]} {RNA1509_12331, RNA1509_18316, RNA1509_37936} {RNA1310_8262, RNA1509_12331, RNA1509_18316, RNA1509_37936} {RNA1509_12331, RNA1509_18316, RNA1509_37936, RNA815_4306.2} |
| 9. | MligTC455_11401 | 391 | 8.15 | Mlig455_013270, Mlig455_013343 | Neo: - Age: Up-Down-Up |
0.952 | - | - | - | 0.952 | - | - | Mlig455_013270 {REF} {Length: 2537} {Celegans: WBGene00003010, lin-24, [Score=71.6, Expect=7e-14]} {RNA1310_28391} {RNA815_8262} Mlig455_013343 {REF} {Length: 2282} {Celegans: WBGene00003010, lin-24, [Score=71.6, Expect=7e-14]} {RNA1310_28391} {RNA815_8262} |
|
| 10. | MligTC455_34054 | 2761 | 57.51 | Mlig455_000070, Mlig455_063736 | Neo: - Age: - |
EIF4G3 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_000070 {REF} {Length: 5242} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=107.1]; MA3 domain [PF02847.19, score=25.3]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [RH, Score=325, Expect=5e-90]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [RH, Score=339, Expect=4e-95]} {Dmel: FBgn0010488, NAT1, [Score=153, Expect=5e-37]} {Smed: dd_Smed_v6_3720_0_1, dd_Smed_v6_3720_0_1, [RH, Score=224, Expect=1e-59]} {RNA1509_35483} {RNA1310_1386.1} {RNA815_242.1} Mlig455_063736 {REF} {Length: 5197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=107.1]; MA3 domain [PF02847.19, score=25.3]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [RH, Score=322, Expect=3e-89]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [RH, Score=340, Expect=2e-95]} {Dmel: FBgn0010488, NAT1, [Score=153, Expect=6e-37]} {Smed: dd_Smed_v6_3720_0_1, dd_Smed_v6_3720_0_1, [RH, Score=224, Expect=1e-59]} {RNA1509_35483} {RNA1310_1386.1} {RNA815_242.1} |
| 11. | MligTC455_19143 | 186 | 3.86 | Mlig455_040116 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_040116 {REF} {Length: 6995} {Smed: dd_Smed_v6_11519_0_1, dd_Smed_v6_11519_0_1, [RH, Score=600, Expect=0.0]} {RNA1509_43828, RNA1509_5002} {RNA1310_824.1, RNA1509_43828} {RNA1509_43828, RNA815_15829} | |
| 12. | MligTC455_29076 | 309 | 6.44 | Mlig455_024906, Mlig455_037258, Mlig455_049791, Mlig455_056880 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_024906 {REF} {Length: 1097} {TRANSSPLICED} {RNA1509_32812} {RNA1310_26724} {RNA815_37733} Mlig455_037258 {REF} {Length: 797} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11960} {RNA1310_26724} {RNA815_45632} Mlig455_049791 {REF} {Length: 844} {NoTransDecoderORF} {RNA1509_11960} {RNA1310_26724} {RNA815_45632} Mlig455_056880 {REF} {Length: 3092} {RNA1509_11960} {RNA1310_22837.1} {RNA815_45632} |
|
| 13. | MligTC455_31906 | 195 | 4.06 | Mlig455_068976 | Neo: - Age: Up-Up-Down |
0.95 | - | - | - | 0.950 | - | - | Mlig455_068976 {REF} {Length: 6455} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=26.5]} {RNA1509_31473} {RNA1310_5450.1} {RNA815_16253.2} |
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