TomoSeq data search

Data search

Results for MligTC455_38971

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_38971	27	0.56	Mlig455_043115	Neo: - Age: -	PCDH7	Mlig455_043115 {REF} {Length: 4896} {Pfam: Cadherin domain [PF00028.19, score=256.7]; Cadherin-like [PF08266.14, score=47.1]; Cadherin-like [PF16184.7, score=37.1]; Bacterial cadherin-like domain [PF17803.3, score=24.4]; Bacterial Ig domain [PF17963.3, score=22.0]} {Human: ENSG00000169851, PCDH7, protocadherin 7, [Score=254, Expect=2e-69]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=253, Expect=3e-68]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=251, Expect=6e-68]; ENSG00000156453, PCDH1, protocadherin 1, [Score=247, Expect=9e-67]} {Mouse: ENSMUSG00000029108, Pcdh7, protocadherin 7, [Score=258, Expect=8e-71]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=250, Expect=2e-68]} {Dmel: FBgn0024836, stan, starry night, [Score=196, Expect=2e-50]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=176, Expect=4e-44]} {Smed: dd_Smed_v6_19816_0_1, dd_Smed_v6_19816_0_1, [Score=291, Expect=1e-82]} {RNA1509_51985} {RNA1310_11215, RNA1509_51985} {RNA1509_51985, RNA815_41327}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_38971

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.995	0.637	0.99945	1.00000
RegionR2	-1.363	0.637	0.99950	1.00000
RegionR3	0.724	0.637	0.30310	0.84483
RegionR4	1.777	0.637	0.28624	0.59566
RegionR5	-0.013	0.637	1.00000	1.00000
RegionR6	3.885	0.637	0.04499	0.39662
RegionR7	-1.271	0.637	0.99918	1.00000
RegionR8	-1.745	0.637	0.99935	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.829	0.637	0.99981	1.00000
RegenerationR2	2.449	0.637	0.37169	0.79697
RegenerationR3	1.405	0.637	0.81321	0.98587
RegenerationR4	0.349	0.637	0.74304	0.96854
RegenerationR5	-0.017	0.637	0.99977	1.00000
RegenerationR6	-2.418	0.637	0.48418	0.79448
RegenerationBL	1.423	0.637	0.80013	1.00000
RegenerationTP	0	0.637	1.00000	1.00000

Genes with expression patterns similar to MligTC455_38971

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38971	27	0.56	Mlig455_043115	Neo: - Age: -	PCDH7	1	-	1.000	-	-	-	-	Mlig455_043115 {REF} {Length: 4896} {Pfam: Cadherin domain [PF00028.19, score=256.7]; Cadherin-like [PF08266.14, score=47.1]; Cadherin-like [PF16184.7, score=37.1]; Bacterial cadherin-like domain [PF17803.3, score=24.4]; Bacterial Ig domain [PF17963.3, score=22.0]} {Human: ENSG00000169851, PCDH7, protocadherin 7, [Score=254, Expect=2e-69]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=253, Expect=3e-68]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=251, Expect=6e-68]; ENSG00000156453, PCDH1, protocadherin 1, [Score=247, Expect=9e-67]} {Mouse: ENSMUSG00000029108, Pcdh7, protocadherin 7, [Score=258, Expect=8e-71]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=250, Expect=2e-68]} {Dmel: FBgn0024836, stan, starry night, [Score=196, Expect=2e-50]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=176, Expect=4e-44]} {Smed: dd_Smed_v6_19816_0_1, dd_Smed_v6_19816_0_1, [Score=291, Expect=1e-82]} {RNA1509_51985} {RNA1310_11215, RNA1509_51985} {RNA1509_51985, RNA815_41327}
2.	MligTC455_08147	19	0.39	Mlig455_069906	Neo: - Age: -		0.997	-	0.997	-	-	-	-	Mlig455_069906 {REF} {Length: 3694} {RNA1310_37273} {RNA815_35000}
3.	MligTC455_02412	75	1.56	Mlig455_011577	Neo: - Age: - Region-enriched R6: 6.973/0.00029		0.993	-	0.993	-	-	-	-	Mlig455_011577 {REF} {Length: 2541} {RNA1310_57680} {RNA815_62505}
4.	MligTC455_11622	36	0.74	Mlig455_052790	Neo: - Age: Down-Up-Down	HOXB6	0.993	-	0.993	-	-	-	-	Mlig455_052790 {REF} {Length: 1720} {Pfam: Homeodomain [PF00046.31, score=71.2]} {Human: ENSG00000108511, HOXB6, homeobox B6, [RH, Score=123, Expect=7e-34]; ENSG00000260027, HOXB7, homeobox B7, [RH, Score=120, Expect=9e-33]; ENSG00000120068, HOXB8, homeobox B8, [RH, Score=119, Expect=3e-32]; ENSG00000122592, HOXA7, homeobox A7, [RH, Score=119, Expect=2e-32]; ENSG00000037965, HOXC8, homeobox C8, [RH, Score=118, Expect=1e-31]} {Mouse: ENSMUSG00000038721, Hoxb7, homeobox B7, [RH, Score=123, Expect=7e-34]; ENSMUSG00000000690, Hoxb6, homeobox B6, [RH, Score=122, Expect=1e-33]; ENSMUSG00000038236, Hoxa7, homeobox A7, [RH, Score=120, Expect=9e-33]; ENSMUSG00000001657, Hoxc8, homeobox C8, [RH, Score=118, Expect=7e-32]} {Dmel: FBgn0003944, Ubx, Ultrabithorax, [RH, Score=132, Expect=4e-36]} {Celegans: WBGene00003102, mab-5, Homeobox protein mab-5, [RH, Score=99.4, Expect=3e-25]} {Smed: dd_Smed_v6_22524_0_1, dd_Smed_v6_22524_0_1, [RH, Score=107, Expect=9e-28]} {RNA1310_76405} {RNA815_40549}
5.	MligTC455_15117	35	0.73	Mlig455_001613, Mlig455_047511	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.507		0.993	-	0.993	-	-	-	-	Mlig455_001613 {REF} {Length: 2934} {Smed: dd_Smed_v6_16282_0_1, dd_Smed_v6_16282_0_1, [Score=47.4, Expect=4e-06]} {RNA1509_20384} {RNA1310_21599.1} {RNA815_8587} Mlig455_047511 {REF} {Length: 2415} {Smed: dd_Smed_v6_16282_0_1, dd_Smed_v6_16282_0_1, [RH, Score=68.9, Expect=2e-13]} {RNA1509_20384} {RNA1310_21599.1} {RNA815_8587}
6.	MligTC455_19233	15	0.3	Mlig455_032773, Mlig455_032776	Neo: - Age: -		0.993	-	0.993	-	-	-	-	Mlig455_032773 {REF} {Length: 607} {NoTransDecoderORF} {RNA1509_52318} {RNA1310_46177} {RNA815_35369} Mlig455_032776 {REF} {Length: 406} {NoTransDecoderORF} {RNA1310_146421} {RNA815_35369}
7.	MligTC455_27290	257	5.35	Mlig455_030127, Mlig455_030193	Neo: - Age: - Region-enriched R6: 7.668/0.00057	CHAC2	0.993	-	0.993	-	-	-	-	Mlig455_030127 {REF} {Length: 1234} {Pfam: ChaC-like protein [PF04752.14, score=100.2]; Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=21.1]} {Human: ENSG00000143942, CHAC2, ChaC cation transport regulator homolog 2, [Score=78.6, Expect=9e-17]} {Mouse: ENSMUSG00000020309, Chac2, ChaC, cation transport regulator 2, [Score=82.0, Expect=3e-18]; ENSMUSG00000027313, Chac1, ChaC, cation transport regulator 1, [Score=80.1, Expect=3e-17]} {Dmel: FBgn0039109, CG10365, [Score=77.8, Expect=4e-16]} {Smed: dd_Smed_v6_2439_0_1, dd_Smed_v6_2439_0_1, [Score=90.1, Expect=4e-21]} {RNA1310_101360} {RNA815_62755} Mlig455_030193 {REF} {Length: 1234} {Pfam: ChaC-like protein [PF04752.14, score=100.2]; Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=21.1]} {Human: ENSG00000143942, CHAC2, ChaC cation transport regulator homolog 2, [Score=78.6, Expect=9e-17]} {Mouse: ENSMUSG00000020309, Chac2, ChaC, cation transport regulator 2, [Score=82.0, Expect=3e-18]; ENSMUSG00000027313, Chac1, ChaC, cation transport regulator 1, [Score=80.1, Expect=3e-17]} {Dmel: FBgn0039109, CG10365, [Score=77.8, Expect=4e-16]} {Smed: dd_Smed_v6_2439_0_1, dd_Smed_v6_2439_0_1, [Score=90.1, Expect=4e-21]} {RNA1310_101360} {RNA815_62755}
8.	MligTC455_52378	23	0.49	Mlig455_023976	Neo: - Age: -		0.989	-	0.989	-	-	-	-	Mlig455_023976 {REF} {Length: 1982} {Pfam: Interferon-induced transmembrane protein [PF04505.14, score=24.8]} {Smed: dd_Smed_v6_18586_0_1, dd_Smed_v6_18586_0_1, [RH, Score=82.4, Expect=3e-20]} {RNA1310_64211} {RNA815_24681}
9.	MligTC455_17323	15	0.32	Mlig455_012298	Neo: Int S/G2/M Age: -		0.986	-	0.986	-	-	-	-	Mlig455_012298 {REF} {Length: 2351} {RNA1310_93397} {RNA815_47617}
10.	MligTC455_11278	56	1.16	Mlig455_013045	Neo: - Age: -		0.979	-	0.979	-	-	-	-	Mlig455_013045 {REF} {Length: 729} {NoTransDecoderORF} {RNA1509_9476} {RNA1310_99761.2} {RNA815_5110.1}
11.	MligTC455_41767	15	0.31	Mlig455_030483	Neo: - Age: Down-Down-Down Regeneration-enriched R4: 5.566 Regeneration-enriched R5: 5.077	ZNF768	0.976	-	0.976	-	-	-	-	Mlig455_030483 {REF} {Length: 2476} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=66.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=50.9]; Zinc finger, C2H2 type [PF00096.28, score=47.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.4]; Zinc-finger double domain [PF13465.8, score=20.3]} {Human: ENSG00000169957, ZNF768, zinc finger protein 768, [Score=81.3, Expect=8e-16]; ENSG00000197483, ZNF628, zinc finger protein 628, [Score=77.8, Expect=1e-14]} {Mouse: ENSMUSG00000047371, Zfp768, zinc finger protein 768, [Score=85.5, Expect=3e-17]} {Dmel: FBgn0020309, crol, crooked legs, [Score=70.9, Expect=1e-12]} {Smed: dd_Smed_v6_48354_0_1, dd_Smed_v6_48354_0_1, [Score=48.9, Expect=2e-06]} {RNA1509_25496} {RNA1310_18575} {RNA815_53687}
12.	MligTC455_38819	130	2.71	Mlig455_027806, Mlig455_063508	Neo: - Age: - Region-enriched R6: 6.639/0.00222	MMP21	0.971	-	0.971	-	-	-	-	Mlig455_027806 {REF} {Length: 2789} {Pfam: Matrixin [PF00413.26, score=104.5]; Putative peptidoglycan binding domain [PF01471.20, score=34.2]} {Human: ENSG00000154485, MMP21, matrix metallopeptidase 21, [Score=157, Expect=1e-40]} {Mouse: ENSMUSG00000030981, Mmp21, matrix metallopeptidase 21, [Score=161, Expect=2e-42]} {Dmel: FBgn0035049, Mmp1, Matrix metalloproteinase 1, [RH, Score=99.0, Expect=2e-21]} {Celegans: WBGene00016283, zmp-3, Matrix metalloproteinase-C, [RH, Score=111, Expect=1e-25]} {Smed: dd_Smed_v6_2305_0_1, dd_Smed_v6_2305_0_1, [RH, Score=102, Expect=6e-23]} {RNA1509_32214} {RNA1310_25063, RNA1509_32214} {RNA1509_32214, RNA815_10687} Mlig455_063508 {REF} {Length: 1811} {Pfam: Matrixin [PF00413.26, score=37.9]} {Human: ENSG00000154485, MMP21, matrix metallopeptidase 21, [Score=77.8, Expect=4e-15]} {Mouse: ENSMUSG00000030981, Mmp21, matrix metallopeptidase 21, [Score=81.3, Expect=2e-16]} {RNA1509_32214} {RNA1310_25063} {RNA815_10687}
13.	MligTC455_17006	9	0.18	Mlig455_064023	Neo: - Age: -	ANK1	0.97	-	0.970	-	-	-	-	Mlig455_064023 {REF} {Length: 3953} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=139.9]; Ankyrin repeats (many copies) [PF13857.8, score=127.7]; Ankyrin repeats (many copies) [PF13637.8, score=115.1]; Ankyrin repeat [PF00023.32, score=98.3]; Ankyrin repeat [PF13606.8, score=85.7]; Mab-21 protein [PF03281.16, score=53.2]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=137, Expect=3e-32]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=135, Expect=6e-32]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=129, Expect=8e-30]} {Dmel: FBgn0039590, CG10011, [Score=130, Expect=2e-30]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=117, Expect=1e-26]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=132, Expect=1e-31]} {RNA1509_56892} {RNA1310_14215, RNA1509_56892} {RNA1509_56892, RNA815_12297}
14.	MligTC455_38818	125	2.6	Mlig455_060036	Neo: - Age: Up-Down-Up Region-enriched R6: 6.700/0.00013	MMP21	0.97	-	0.970	-	-	-	-	Mlig455_060036 {REF} {Length: 2662} {Pfam: Matrixin [PF00413.26, score=105.2]; Putative peptidoglycan binding domain [PF01471.20, score=33.5]} {Human: ENSG00000154485, MMP21, matrix metallopeptidase 21, [Score=154, Expect=1e-39]} {Mouse: ENSMUSG00000030981, Mmp21, matrix metallopeptidase 21, [Score=160, Expect=4e-42]} {Dmel: FBgn0035049, Mmp1, Matrix metalloproteinase 1, [RH, Score=101, Expect=2e-22]} {Celegans: WBGene00016283, zmp-3, Matrix metalloproteinase-C, [RH, Score=110, Expect=2e-25]} {Smed: dd_Smed_v6_2305_0_1, dd_Smed_v6_2305_0_1, [RH, Score=104, Expect=2e-23]} {RNA1509_32214} {RNA1310_25063} {RNA815_10687}
15.	MligTC455_06843	12	0.24	Mlig455_016840	Neo: - Age: -		0.968	-	0.968	-	-	-	-	Mlig455_016840 {REF} {Length: 672} {NoTransDecoderORF} {RNA1509_22223} {RNA1310_28433} {RNA815_35350}
16.	MligTC455_06844	37	0.78	Mlig455_016853, Mlig455_065918, Mlig455_070014	Neo: - Age: -		0.967	-	0.967	-	-	-	-	Mlig455_016853 {REF} {Length: 347} {NoTransDecoderORF} {RNA1509_48234} {RNA1310_28433} {RNA815_55884} Mlig455_065918 {REF} {Length: 813} {NoTransDecoderORF} {RNA1509_22223} {RNA1310_37847} {RNA815_35350} Mlig455_070014 {REF} {Length: 671} {NoTransDecoderORF} {RNA1509_22223} {RNA1310_28433} {RNA815_35350}
17.	MligTC455_18128	4	0.08	Mlig455_012093	Neo: - Age: -		0.966	-	0.966	-	-	-	-	Mlig455_012093 {REF} {Length: 250} {NoTransDecoderORF} {RNA1310_75900}
18.	MligTC455_18718	34	0.72	Mlig455_044622, Mlig455_044678	Neo: - Age: -		0.966	-	0.966	-	-	-	-	Mlig455_044622 {REF} {Length: 2893} {RNA1509_53544} {RNA1310_45707} {RNA815_63573} Mlig455_044678 {REF} {Length: 2909} {RNA1509_53544} {RNA1310_45707} {RNA815_63573}
19.	MligTC455_39551	69	1.43	Mlig455_004601	Neo: - Age: logFC(26M/2M)=-0.786		0.964	-	0.964	-	-	-	-	Mlig455_004601 {REF} {Length: 1350} {Pfam: Universal stress protein family [PF00582.28, score=101.3]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=120, Expect=1e-35]} {RNA1509_6489} {RNA1310_30549} {RNA815_15599}
20.	MligTC455_18568	154	3.22	Mlig455_027544	Neo: - Age: Up-Down-Up Region-enriched R6: 3.721/0.01003	MCTP1	0.953	-	0.953	-	-	-	-	Mlig455_027544 {REF} {Length: 3817} {Pfam: C2 domain [PF00168.32, score=201.6]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=28.9]} {Human: ENSG00000175471, MCTP1, multiple C2 and transmembrane domain containing 1, [RH, Score=411, Expect=4e-131]} {Mouse: ENSMUSG00000021596, Mctp1, multiple C2 domains, transmembrane 1, [RH, Score=372, Expect=8e-115]} {Dmel: FBgn0034389, Mctp, Multiple C2 domain and transmembrane region protein, [RH, Score=297, Expect=2e-87]} {Celegans: WBGene00017063, mctp-1, Multiple C2 and Transmembrane region Protein family homolog, [RH, Score=343, Expect=4e-105]} {Smed: dd_Smed_v6_4464_0_1, dd_Smed_v6_4464_0_1, [Score=65.5, Expect=8e-11]} {RNA1509_54372} {RNA1310_4746} {RNA815_13454}
21.	MligTC455_20721	532	11.08	Mlig455_065657	Neo: - Age: Up-Down-Down Region-enriched R6: 7.985/0.00000		0.953	-	0.953	-	-	-	-	Mlig455_065657 {REF} {Length: 974} {TRANSSPLICED} {RNA1509_30258, RNA1509_54865} {RNA1310_41086.1, RNA1509_54865} {RNA1509_54865, RNA815_30011}