TomoSeq data search

Data search

Results for MligTC455_41767

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41767

15

0.31

Mlig455_030483

Neo: -

Age: Down-Down-Down

Regeneration-enriched R4: 5.566
Regeneration-enriched R5: 5.077

ZNF768

Mlig455_030483 {REF} {Length: 2476} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=66.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=50.9]; Zinc finger, C2H2 type [PF00096.28, score=47.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.4]; Zinc-finger double domain [PF13465.8, score=20.3]} {Human: ENSG00000169957, ZNF768, zinc finger protein 768, [Score=81.3, Expect=8e-16]; ENSG00000197483, ZNF628, zinc finger protein 628, [Score=77.8, Expect=1e-14]} {Mouse: ENSMUSG00000047371, Zfp768, zinc finger protein 768, [Score=85.5, Expect=3e-17]} {Dmel: FBgn0020309, crol, crooked legs, [Score=70.9, Expect=1e-12]} {Smed: dd_Smed_v6_48354_0_1, dd_Smed_v6_48354_0_1, [Score=48.9, Expect=2e-06]} {RNA1509_25496} {RNA1310_18575} {RNA815_53687}

Cumulative graph for MligTC455_41767

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.452	0.794	0.99964	1.00000
RegionR2	3.124	0.794	0.99962	1.00000
RegionR3	2.045	0.794	0.13330	0.62600
RegionR4	-2.587	0.794	0.99955	1.00000
RegionR5	0.68	0.794	0.92793	1.00000
RegionR6	2.903	0.794	0.15889	0.71041
RegionR7	0.716	0.794	0.85769	1.00000
RegionR8	-0.429	0.794	0.99960	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	7.796	0.794	0.99985	1.00000
RegenerationR2	2.944	0.794	0.99979	1.00000
RegenerationR3	3.911	0.794	0.00247	0.08606
RegenerationR4	5.566	0.794	0.00014	0.00910
RegenerationR5	5.077	0.794	0.00001	0.00296
RegenerationR6	3.671	0.794	0.00247	0.05632
RegenerationBL	2.468	0.794	0.99952	1.00000
RegenerationTP	4.854	0.794	0.06249	0.40448

Genes with expression patterns similar to MligTC455_41767

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41767	15	0.31	Mlig455_030483	Neo: - Age: Down-Down-Down Regeneration-enriched R4: 5.566 Regeneration-enriched R5: 5.077	ZNF768	2	-	1.000	-	-	-	1.000	Mlig455_030483 {REF} {Length: 2476} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=66.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=50.9]; Zinc finger, C2H2 type [PF00096.28, score=47.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.4]; Zinc-finger double domain [PF13465.8, score=20.3]} {Human: ENSG00000169957, ZNF768, zinc finger protein 768, [Score=81.3, Expect=8e-16]; ENSG00000197483, ZNF628, zinc finger protein 628, [Score=77.8, Expect=1e-14]} {Mouse: ENSMUSG00000047371, Zfp768, zinc finger protein 768, [Score=85.5, Expect=3e-17]} {Dmel: FBgn0020309, crol, crooked legs, [Score=70.9, Expect=1e-12]} {Smed: dd_Smed_v6_48354_0_1, dd_Smed_v6_48354_0_1, [Score=48.9, Expect=2e-06]} {RNA1509_25496} {RNA1310_18575} {RNA815_53687}
2.	MligTC455_08147	19	0.39	Mlig455_069906	Neo: - Age: -		0.98	-	0.980	-	-	-	-	Mlig455_069906 {REF} {Length: 3694} {RNA1310_37273} {RNA815_35000}
3.	MligTC455_38818	125	2.6	Mlig455_060036	Neo: - Age: Up-Down-Up Region-enriched R6: 6.700/0.00013	MMP21	0.98	-	0.980	-	-	-	-	Mlig455_060036 {REF} {Length: 2662} {Pfam: Matrixin [PF00413.26, score=105.2]; Putative peptidoglycan binding domain [PF01471.20, score=33.5]} {Human: ENSG00000154485, MMP21, matrix metallopeptidase 21, [Score=154, Expect=1e-39]} {Mouse: ENSMUSG00000030981, Mmp21, matrix metallopeptidase 21, [Score=160, Expect=4e-42]} {Dmel: FBgn0035049, Mmp1, Matrix metalloproteinase 1, [RH, Score=101, Expect=2e-22]} {Celegans: WBGene00016283, zmp-3, Matrix metalloproteinase-C, [RH, Score=110, Expect=2e-25]} {Smed: dd_Smed_v6_2305_0_1, dd_Smed_v6_2305_0_1, [RH, Score=104, Expect=2e-23]} {RNA1509_32214} {RNA1310_25063} {RNA815_10687}
4.	MligTC455_38819	130	2.71	Mlig455_027806, Mlig455_063508	Neo: - Age: - Region-enriched R6: 6.639/0.00222	MMP21	0.98	-	0.980	-	-	-	-	Mlig455_027806 {REF} {Length: 2789} {Pfam: Matrixin [PF00413.26, score=104.5]; Putative peptidoglycan binding domain [PF01471.20, score=34.2]} {Human: ENSG00000154485, MMP21, matrix metallopeptidase 21, [Score=157, Expect=1e-40]} {Mouse: ENSMUSG00000030981, Mmp21, matrix metallopeptidase 21, [Score=161, Expect=2e-42]} {Dmel: FBgn0035049, Mmp1, Matrix metalloproteinase 1, [RH, Score=99.0, Expect=2e-21]} {Celegans: WBGene00016283, zmp-3, Matrix metalloproteinase-C, [RH, Score=111, Expect=1e-25]} {Smed: dd_Smed_v6_2305_0_1, dd_Smed_v6_2305_0_1, [RH, Score=102, Expect=6e-23]} {RNA1509_32214} {RNA1310_25063, RNA1509_32214} {RNA1509_32214, RNA815_10687} Mlig455_063508 {REF} {Length: 1811} {Pfam: Matrixin [PF00413.26, score=37.9]} {Human: ENSG00000154485, MMP21, matrix metallopeptidase 21, [Score=77.8, Expect=4e-15]} {Mouse: ENSMUSG00000030981, Mmp21, matrix metallopeptidase 21, [Score=81.3, Expect=2e-16]} {RNA1509_32214} {RNA1310_25063} {RNA815_10687}
5.	MligTC455_17323	15	0.32	Mlig455_012298	Neo: Int S/G2/M Age: -		0.978	-	0.978	-	-	-	-	Mlig455_012298 {REF} {Length: 2351} {RNA1310_93397} {RNA815_47617}
6.	MligTC455_52378	23	0.49	Mlig455_023976	Neo: - Age: -		0.978	-	0.978	-	-	-	-	Mlig455_023976 {REF} {Length: 1982} {Pfam: Interferon-induced transmembrane protein [PF04505.14, score=24.8]} {Smed: dd_Smed_v6_18586_0_1, dd_Smed_v6_18586_0_1, [RH, Score=82.4, Expect=3e-20]} {RNA1310_64211} {RNA815_24681}
7.	MligTC455_38971	27	0.56	Mlig455_043115	Neo: - Age: -	PCDH7	0.976	-	0.976	-	-	-	-	Mlig455_043115 {REF} {Length: 4896} {Pfam: Cadherin domain [PF00028.19, score=256.7]; Cadherin-like [PF08266.14, score=47.1]; Cadherin-like [PF16184.7, score=37.1]; Bacterial cadherin-like domain [PF17803.3, score=24.4]; Bacterial Ig domain [PF17963.3, score=22.0]} {Human: ENSG00000169851, PCDH7, protocadherin 7, [Score=254, Expect=2e-69]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=253, Expect=3e-68]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=251, Expect=6e-68]; ENSG00000156453, PCDH1, protocadherin 1, [Score=247, Expect=9e-67]} {Mouse: ENSMUSG00000029108, Pcdh7, protocadherin 7, [Score=258, Expect=8e-71]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=250, Expect=2e-68]} {Dmel: FBgn0024836, stan, starry night, [Score=196, Expect=2e-50]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=176, Expect=4e-44]} {Smed: dd_Smed_v6_19816_0_1, dd_Smed_v6_19816_0_1, [Score=291, Expect=1e-82]} {RNA1509_51985} {RNA1310_11215, RNA1509_51985} {RNA1509_51985, RNA815_41327}
8.	MligTC455_02412	75	1.56	Mlig455_011577	Neo: - Age: - Region-enriched R6: 6.973/0.00029		0.974	-	0.974	-	-	-	-	Mlig455_011577 {REF} {Length: 2541} {RNA1310_57680} {RNA815_62505}
9.	MligTC455_11622	36	0.74	Mlig455_052790	Neo: - Age: Down-Up-Down	HOXB6	0.974	-	0.974	-	-	-	-	Mlig455_052790 {REF} {Length: 1720} {Pfam: Homeodomain [PF00046.31, score=71.2]} {Human: ENSG00000108511, HOXB6, homeobox B6, [RH, Score=123, Expect=7e-34]; ENSG00000260027, HOXB7, homeobox B7, [RH, Score=120, Expect=9e-33]; ENSG00000120068, HOXB8, homeobox B8, [RH, Score=119, Expect=3e-32]; ENSG00000122592, HOXA7, homeobox A7, [RH, Score=119, Expect=2e-32]; ENSG00000037965, HOXC8, homeobox C8, [RH, Score=118, Expect=1e-31]} {Mouse: ENSMUSG00000038721, Hoxb7, homeobox B7, [RH, Score=123, Expect=7e-34]; ENSMUSG00000000690, Hoxb6, homeobox B6, [RH, Score=122, Expect=1e-33]; ENSMUSG00000038236, Hoxa7, homeobox A7, [RH, Score=120, Expect=9e-33]; ENSMUSG00000001657, Hoxc8, homeobox C8, [RH, Score=118, Expect=7e-32]} {Dmel: FBgn0003944, Ubx, Ultrabithorax, [RH, Score=132, Expect=4e-36]} {Celegans: WBGene00003102, mab-5, Homeobox protein mab-5, [RH, Score=99.4, Expect=3e-25]} {Smed: dd_Smed_v6_22524_0_1, dd_Smed_v6_22524_0_1, [RH, Score=107, Expect=9e-28]} {RNA1310_76405} {RNA815_40549}
10.	MligTC455_15117	35	0.73	Mlig455_001613, Mlig455_047511	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.507		0.974	-	0.974	-	-	-	-	Mlig455_001613 {REF} {Length: 2934} {Smed: dd_Smed_v6_16282_0_1, dd_Smed_v6_16282_0_1, [Score=47.4, Expect=4e-06]} {RNA1509_20384} {RNA1310_21599.1} {RNA815_8587} Mlig455_047511 {REF} {Length: 2415} {Smed: dd_Smed_v6_16282_0_1, dd_Smed_v6_16282_0_1, [RH, Score=68.9, Expect=2e-13]} {RNA1509_20384} {RNA1310_21599.1} {RNA815_8587}
11.	MligTC455_19233	15	0.3	Mlig455_032773, Mlig455_032776	Neo: - Age: -		0.974	-	0.974	-	-	-	-	Mlig455_032773 {REF} {Length: 607} {NoTransDecoderORF} {RNA1509_52318} {RNA1310_46177} {RNA815_35369} Mlig455_032776 {REF} {Length: 406} {NoTransDecoderORF} {RNA1310_146421} {RNA815_35369}
12.	MligTC455_27290	257	5.35	Mlig455_030127, Mlig455_030193	Neo: - Age: - Region-enriched R6: 7.668/0.00057	CHAC2	0.974	-	0.974	-	-	-	-	Mlig455_030127 {REF} {Length: 1234} {Pfam: ChaC-like protein [PF04752.14, score=100.2]; Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=21.1]} {Human: ENSG00000143942, CHAC2, ChaC cation transport regulator homolog 2, [Score=78.6, Expect=9e-17]} {Mouse: ENSMUSG00000020309, Chac2, ChaC, cation transport regulator 2, [Score=82.0, Expect=3e-18]; ENSMUSG00000027313, Chac1, ChaC, cation transport regulator 1, [Score=80.1, Expect=3e-17]} {Dmel: FBgn0039109, CG10365, [Score=77.8, Expect=4e-16]} {Smed: dd_Smed_v6_2439_0_1, dd_Smed_v6_2439_0_1, [Score=90.1, Expect=4e-21]} {RNA1310_101360} {RNA815_62755} Mlig455_030193 {REF} {Length: 1234} {Pfam: ChaC-like protein [PF04752.14, score=100.2]; Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=21.1]} {Human: ENSG00000143942, CHAC2, ChaC cation transport regulator homolog 2, [Score=78.6, Expect=9e-17]} {Mouse: ENSMUSG00000020309, Chac2, ChaC, cation transport regulator 2, [Score=82.0, Expect=3e-18]; ENSMUSG00000027313, Chac1, ChaC, cation transport regulator 1, [Score=80.1, Expect=3e-17]} {Dmel: FBgn0039109, CG10365, [Score=77.8, Expect=4e-16]} {Smed: dd_Smed_v6_2439_0_1, dd_Smed_v6_2439_0_1, [Score=90.1, Expect=4e-21]} {RNA1310_101360} {RNA815_62755}
13.	MligTC455_20721	532	11.08	Mlig455_065657	Neo: - Age: Up-Down-Down Region-enriched R6: 7.985/0.00000		0.973	-	0.973	-	-	-	-	Mlig455_065657 {REF} {Length: 974} {TRANSSPLICED} {RNA1509_30258, RNA1509_54865} {RNA1310_41086.1, RNA1509_54865} {RNA1509_54865, RNA815_30011}
14.	MligTC455_27293	11	0.23	Mlig455_067971	Neo: - Age: -	CHAC2	0.96	-	0.960	-	-	-	-	Mlig455_067971 {REF} {Length: 1211} {Pfam: ChaC-like protein [PF04752.14, score=99.4]; Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=21.4]} {Human: ENSG00000143942, CHAC2, ChaC cation transport regulator homolog 2, [Score=77.8, Expect=1e-16]} {Mouse: ENSMUSG00000020309, Chac2, ChaC, cation transport regulator 2, [Score=81.3, Expect=6e-18]; ENSMUSG00000027313, Chac1, ChaC, cation transport regulator 1, [Score=78.6, Expect=1e-16]} {Dmel: FBgn0039109, CG10365, [Score=77.0, Expect=7e-16]} {Smed: dd_Smed_v6_2439_0_1, dd_Smed_v6_2439_0_1, [Score=89.0, Expect=1e-20]} {RNA1310_101360} {RNA815_62755}
15.	MligTC455_20717	964	20.08	Mlig455_010303, Mlig455_010334	Neo: - Age: - Region-enriched R6: 8.114/0.00000 Regeneration-upregulated TP: 8.019 Regeneration-enriched TP: 8.019		0.959	-	0.959	-	-	-	-	Mlig455_010303 {REF} {Length: 1139} {TRANSSPLICED} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=45.8, Expect=7e-06]} {RNA1509_30258} {RNA1310_41086.1} {RNA815_30011} Mlig455_010334 {REF} {Length: 2409} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=45.8, Expect=7e-06]} {RNA1509_54865} {RNA1310_41086.1} {RNA815_30011}
16.	MligTC455_39551	69	1.43	Mlig455_004601	Neo: - Age: logFC(26M/2M)=-0.786		0.955	-	0.955	-	-	-	-	Mlig455_004601 {REF} {Length: 1350} {Pfam: Universal stress protein family [PF00582.28, score=101.3]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=120, Expect=1e-35]} {RNA1509_6489} {RNA1310_30549} {RNA815_15599}
17.	MligTC455_18128	4	0.08	Mlig455_012093	Neo: - Age: -		0.952	-	0.952	-	-	-	-	Mlig455_012093 {REF} {Length: 250} {NoTransDecoderORF} {RNA1310_75900}

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