M. lignano Tomo-Seq
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Results for MligTC455_38991

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38991 838 17.45 Mlig455_050452

Neo: -

Age: Up-Down-Down

Region-enriched R6: 1.607/0.00252

 Mlig455_050452 {REF} {Length: 3133} {Pfam: Aminotransferase class-V [PF00266.21, score=51.3]} {Smed: dd_Smed_v6_6547_0_1, dd_Smed_v6_6547_0_1, [RH, Score=202, Expect=8e-61]} {RNA1509_19354} {RNA1310_15282, RNA1509_19354} {RNA1509_19354, RNA815_6721.1}

Cumulative graph for MligTC455_38991

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.184 4.442 0.90003 1.00000
RegionR2 -1.168 4.442 0.04305 0.24350
RegionR3 -1.041 4.442 0.03712 0.33478
RegionR4 0.663 4.442 0.19307 0.46989
RegionR5 0.858 4.442 0.02130 0.10146
RegionR6 1.607 4.442 0.00002 0.00252
RegionR7 -0.08 4.442 0.89884 1.00000
RegionR8 -0.656 4.442 0.45168 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.279 4.442 0.42496 1.00000
RegenerationR2 0.161 4.442 0.73098 0.96601
RegenerationR3 0.399 4.442 0.43357 0.82328
RegenerationR4 0.394 4.442 0.40151 0.81437
RegenerationR5 0.874 4.442 0.03423 0.30789
RegenerationR6 0.391 4.442 0.33189 0.67801
RegenerationBL 0.505 4.442 0.34037 0.70711
RegenerationTP 0.969 4.442 0.13124 0.54478


Genes with expression patterns similar to MligTC455_38991

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38991 838 17.45 Mlig455_050452

Neo: -

Age: Up-Down-Down

Region-enriched R6: 1.607/0.00252

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_050452 {REF} {Length: 3133} {Pfam: Aminotransferase class-V [PF00266.21, score=51.3]} {Smed: dd_Smed_v6_6547_0_1, dd_Smed_v6_6547_0_1, [RH, Score=202, Expect=8e-61]} {RNA1509_19354} {RNA1310_15282, RNA1509_19354} {RNA1509_19354, RNA815_6721.1}
2. MligTC455_47253 1361 28.36 Mlig455_068509

Neo: -

Age: Down-Up-Down

Region-enriched R6: 3.710/0.00000
Region-enriched R7: 3.516/0.00000
Region-enriched R8: 2.642/0.02845
Region-enriched R5: 2.104/0.00217

Regeneration-upregulated R4: 2.230

Regeneration-enriched R4: 2.230

 2.523 - - 0.796 0.767 0.960 - Mlig455_068509 {REF} {Length: 1557} {Pfam: Tumor necrosis factor receptor member 16 trans-membrane domain [PF18422.3, score=29.9]; Death domain [PF00531.24, score=24.7]} {RNA1509_20208} {RNA1310_25908} {RNA815_31281}
3. MligTC455_11750 437 9.11 Mlig455_050976

Neo: -

Age: logFC(26M/2M)=-0.564

 0.951 - - 0.951 - - - Mlig455_050976 {REF} {Length: 2145} {RNA1509_16212} {RNA1310_15461.1, RNA1509_16212} {RNA1509_16212, RNA815_8985.1}

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