TomoSeq data search

Data search

Results for MligTC455_38999

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38999

19

0.40

Mlig455_003472

Neo: -

Age: -

Regeneration-enriched R5: 6.183
Regeneration-enriched R2: 5.124

Mlig455_003472 {REF} {Length: 2838} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.3]; Integrase core domain [PF00665.28, score=24.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=23.4]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=67.8, Expect=1e-11]} {RNA1509_7715} {RNA1310_17276.1} {RNA815_49969}

Cumulative graph for MligTC455_38999

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.052	0.774	0.99967	1.00000
RegionR2	4.87	0.774	0.99985	1.00000
RegionR3	0.399	0.774	1.00000	1.00000
RegionR4	-4.394	0.774	0.99970	1.00000
RegionR5	-1.3	0.774	0.99980	1.00000
RegionR6	0.453	0.774	0.99996	1.00000
RegionR7	1.63	0.774	0.99992	1.00000
RegionR8	2.395	0.774	0.99991	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	6.172	0.774	0.99989	1.00000
RegenerationR2	5.124	0.774	0.00003	0.00628
RegenerationR3	6.779	0.774	0.00009	0.01055
RegenerationR4	5.262	0.774	0.00137	0.04378
RegenerationR5	6.183	0.774	0.00002	0.00488
RegenerationR6	4.019	0.774	0.02182	0.18319
RegenerationBL	3.267	0.774	0.10328	0.37923
RegenerationTP	5.396	0.774	0.00503	0.11897

Genes with expression patterns similar to MligTC455_38999

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38999	19	0.4	Mlig455_003472	Neo: - Age: - Regeneration-enriched R5: 6.183 Regeneration-enriched R2: 5.124		2	-	-	-	-	1.000	1.000	Mlig455_003472 {REF} {Length: 2838} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.3]; Integrase core domain [PF00665.28, score=24.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=23.4]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=67.8, Expect=1e-11]} {RNA1509_7715} {RNA1310_17276.1} {RNA815_49969}
2.	MligTC455_25259	108	2.26	Mlig455_016987	Neo: - Age: -	TMEM30B	0.964	-	-	-	-	-	0.964	Mlig455_016987 {REF} {Length: 2255} {TRANSSPLICED} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=285.6]} {Human: ENSG00000182107, TMEM30B, transmembrane protein 30B, [RH, Score=261, Expect=4e-83]} {Mouse: ENSMUSG00000034435, Tmem30b, transmembrane protein 30B, [RH, Score=253, Expect=2e-80]; ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [RH, Score=242, Expect=7e-76]} {Dmel: FBgn0030752, CG9947, [RH, Score=307, Expect=2e-101]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [RH, Score=287, Expect=9e-94]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=293, Expect=2e-96]} {RNA1509_30971} {RNA1310_19947, RNA1509_30971} {RNA1509_30971, RNA815_8261.1}
3.	MligTC455_07296	59	1.23	Mlig455_044435	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_044435 {REF} {Length: 421} {RNA1509_58151} {RNA1310_14407.1} {RNA815_35844}
4.	MligTC455_38490	38	0.8	Mlig455_028980	Neo: - Age: Down-Up-Down		0.957	-	-	-	-	0.957	-	Mlig455_028980 {REF} {Length: 3387} {RNA1509_29504} {RNA1310_1629} {RNA815_5687}
5.	MligTC455_51432	21	0.43	Mlig455_006079, Mlig455_068043	Neo: - Age: - Region-enriched R2: 7.562/0.00199		0.953	-	-	-	-	0.953	-	Mlig455_006079 {REF} {Length: 983} {Pfam: F5/8 type C domain [PF00754.27, score=24.7]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=57.8, Expect=9e-11]} {RNA1509_36923} {RNA1310_38503} {RNA815_10591.2} Mlig455_068043 {REF} {Length: 1040} {Pfam: F5/8 type C domain [PF00754.27, score=29.3]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=61.2, Expect=5e-12]} {RNA1509_36923} {RNA1310_38503} {RNA815_10591.2}
6.	MligTC455_31987	17	0.35	Mlig455_053721, Mlig455_053736	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.756		0.952	-	-	-	-	-	0.952	Mlig455_053721 {REF} {Length: 3229} {Pfam: Glycine rich protein [PF12810.9, score=26.2]} {RNA1509_7715} {RNA1310_34278} {RNA815_41286} Mlig455_053736 {REF} {Length: 1205} {Pfam: Glycine rich protein [PF12810.9, score=26.2]} {RNA1310_60499}
7.	MligTC455_41673	26	0.54	Mlig455_035834	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_035834 {REF} {Length: 1561} {NoTransDecoderORF} {RNA1310_64046} {RNA815_37581}

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