TomoSeq data search

Data search

Results for MligTC455_39119

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_39119	469	9.76	Mlig455_047170, Mlig455_048512	Neo: - Age: logFC(26M/2M)=0.859 Region-enriched R4: 2.663/0.00988	RAC1	Mlig455_047170 {REF} {Length: 2656} {Pfam: Ras family [PF00071.24, score=256.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=126.1]; ADP-ribosylation factor family [PF00025.23, score=52.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.2]; Bacterial TniB protein [PF05621.13, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=197, Expect=8e-60]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=194, Expect=3e-58]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=191, Expect=3e-57]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=189, Expect=3e-56]; ENSG00000070831, CDC42, cell division cycle 42, [Score=188, Expect=4e-56]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=188, Expect=4e-56]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=197, Expect=6e-60]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=192, Expect=6e-58]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=191, Expect=2e-57]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=188, Expect=3e-56]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=188, Expect=4e-56]} {Dmel: FBgn0010333, Rac1, [Score=196, Expect=1e-59]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=194, Expect=4e-59]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=191, Expect=1e-57]} {RNA1509_10246} {RNA1310_7436, RNA1509_10246} {RNA1509_10246, RNA815_2869} Mlig455_048512 {REF} {Length: 2655} {Pfam: Ras family [PF00071.24, score=256.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=126.1]; ADP-ribosylation factor family [PF00025.23, score=52.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.2]; Bacterial TniB protein [PF05621.13, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=197, Expect=8e-60]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=194, Expect=3e-58]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=191, Expect=3e-57]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=189, Expect=3e-56]; ENSG00000070831, CDC42, cell division cycle 42, [Score=188, Expect=4e-56]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=188, Expect=4e-56]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=197, Expect=5e-60]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=192, Expect=5e-58]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=191, Expect=2e-57]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=188, Expect=4e-56]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=188, Expect=3e-56]} {Dmel: FBgn0010333, Rac1, [Score=196, Expect=1e-59]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=194, Expect=4e-59]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=191, Expect=1e-57]} {RNA1509_10246} {RNA1310_7436} {RNA815_2869}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_39119

469

9.76

Mlig455_047170, Mlig455_048512

Neo: -

Age: logFC(26M/2M)=0.859

Region-enriched R4: 2.663/0.00988

RAC1

Mlig455_047170 {REF} {Length: 2656} {Pfam: Ras family [PF00071.24, score=256.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=126.1]; ADP-ribosylation factor family [PF00025.23, score=52.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.2]; Bacterial TniB protein [PF05621.13, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=197, Expect=8e-60]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=194, Expect=3e-58]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=191, Expect=3e-57]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=189, Expect=3e-56]; ENSG00000070831, CDC42, cell division cycle 42, [Score=188, Expect=4e-56]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=188, Expect=4e-56]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=197, Expect=6e-60]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=192, Expect=6e-58]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=191, Expect=2e-57]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=188, Expect=3e-56]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=188, Expect=4e-56]} {Dmel: FBgn0010333, Rac1, [Score=196, Expect=1e-59]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=194, Expect=4e-59]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=191, Expect=1e-57]} {RNA1509_10246} {RNA1310_7436, RNA1509_10246} {RNA1509_10246, RNA815_2869}

Mlig455_048512 {REF} {Length: 2655} {Pfam: Ras family [PF00071.24, score=256.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=126.1]; ADP-ribosylation factor family [PF00025.23, score=52.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.2]; Bacterial TniB protein [PF05621.13, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=197, Expect=8e-60]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=194, Expect=3e-58]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=191, Expect=3e-57]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=189, Expect=3e-56]; ENSG00000070831, CDC42, cell division cycle 42, [Score=188, Expect=4e-56]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=188, Expect=4e-56]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=197, Expect=5e-60]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=192, Expect=5e-58]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=191, Expect=2e-57]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=188, Expect=4e-56]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=188, Expect=3e-56]} {Dmel: FBgn0010333, Rac1, [Score=196, Expect=1e-59]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=194, Expect=4e-59]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=191, Expect=1e-57]} {RNA1509_10246} {RNA1310_7436} {RNA815_2869}

Cumulative graph for MligTC455_39119

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.429	3.656	0.08969	0.64415
RegionR2	-0.235	3.656	0.91399	1.00000
RegionR3	1.446	3.656	0.04491	0.37083
RegionR4	2.663	3.656	0.00093	0.00988
RegionR5	0.324	3.656	0.70182	1.00000
RegionR6	1.032	3.656	0.21548	0.79341
RegionR7	1.268	3.656	0.16552	0.75014
RegionR8	-0.07	3.656	0.87971	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.55	3.656	0.11824	0.84662
RegenerationR2	-0.942	3.656	0.08325	0.46388
RegenerationR3	-0.704	3.656	0.19115	0.62630
RegenerationR4	-0.68	3.656	0.23818	0.68720
RegenerationR5	1.212	3.656	0.03610	0.31478
RegenerationR6	0.501	3.656	0.36728	0.71051
RegenerationBL	0.275	3.656	0.66278	0.99708
RegenerationTP	-0.106	3.656	0.89629	1.00000

Genes with expression patterns similar to MligTC455_39119

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39119	469	9.76	Mlig455_047170, Mlig455_048512	Neo: - Age: logFC(26M/2M)=0.859 Region-enriched R4: 2.663/0.00988	RAC1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_047170 {REF} {Length: 2656} {Pfam: Ras family [PF00071.24, score=256.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=126.1]; ADP-ribosylation factor family [PF00025.23, score=52.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.2]; Bacterial TniB protein [PF05621.13, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=197, Expect=8e-60]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=194, Expect=3e-58]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=191, Expect=3e-57]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=189, Expect=3e-56]; ENSG00000070831, CDC42, cell division cycle 42, [Score=188, Expect=4e-56]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=188, Expect=4e-56]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=197, Expect=6e-60]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=192, Expect=6e-58]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=191, Expect=2e-57]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=188, Expect=3e-56]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=188, Expect=4e-56]} {Dmel: FBgn0010333, Rac1, [Score=196, Expect=1e-59]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=194, Expect=4e-59]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=191, Expect=1e-57]} {RNA1509_10246} {RNA1310_7436, RNA1509_10246} {RNA1509_10246, RNA815_2869} Mlig455_048512 {REF} {Length: 2655} {Pfam: Ras family [PF00071.24, score=256.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=126.1]; ADP-ribosylation factor family [PF00025.23, score=52.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.2]; Bacterial TniB protein [PF05621.13, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=197, Expect=8e-60]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=194, Expect=3e-58]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=191, Expect=3e-57]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=189, Expect=3e-56]; ENSG00000070831, CDC42, cell division cycle 42, [Score=188, Expect=4e-56]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=188, Expect=4e-56]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=197, Expect=5e-60]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=192, Expect=5e-58]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=191, Expect=2e-57]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=188, Expect=4e-56]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=188, Expect=3e-56]} {Dmel: FBgn0010333, Rac1, [Score=196, Expect=1e-59]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=194, Expect=4e-59]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=191, Expect=1e-57]} {RNA1509_10246} {RNA1310_7436} {RNA815_2869}
2.	MligTC455_37612	366	7.62	Mlig455_026659	Neo: Int S/G2/M Age: - Region-enriched R5: 3.326/0.00001		0.954	-	-	-	0.954	-	-	Mlig455_026659 {REF} {Length: 1882} {TRANSSPLICED} {RNA1509_32576, RNA1509_34929} {RNA1310_30559.1, RNA1509_32576, RNA1509_34929} {RNA1509_32576, RNA1509_34929, RNA815_13235.1}
3.	MligTC455_50395	1278	26.61	Mlig455_011286	Neo: - Age: -	MTCH2	0.952	-	-	-	0.952	-	-	Mlig455_011286 {REF} {Length: 2302} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=44.0]} {Human: ENSG00000109919, MTCH2, mitochondrial carrier 2, [RH, Score=134, Expect=5e-37]; ENSG00000285121, MTCH2, mitochondrial carrier 2, [RH, Score=134, Expect=5e-37]} {Mouse: ENSMUSG00000027282, Mtch2, mitochondrial carrier 2, [RH, Score=133, Expect=8e-37]; ENSMUSG00000111714, Mtch2, mitochondrial carrier 2, [RH, Score=133, Expect=8e-37]} {Dmel: FBgn0027786, Mtch, Mitochondrial carrier homolog 1, [RH, Score=124, Expect=3e-33]} {Celegans: WBGene00018395, mtch-1, MiTochondrial Carrier Homolog, [RH, Score=95.1, Expect=3e-22]} {Smed: dd_Smed_v6_4473_0_1, dd_Smed_v6_4473_0_1, [RH, Score=146, Expect=3e-42]} {RNA1509_13731} {RNA1310_20663.1, RNA1509_13731} {RNA1509_13731, RNA815_6703.1}
4.	MligTC455_48831	759	15.82	Mlig455_040825, Mlig455_040922	Neo: - Age: logFC(26M/2M)=0.231 Region-enriched R4: 3.032/0.00938	FBXO38	0.951	-	-	0.951	-	-	-	Mlig455_040825 {REF} {Length: 4225} {Pfam: F-box-like [PF12937.9, score=32.9]; F-box domain [PF00646.35, score=20.4]} {Human: ENSG00000145868, FBXO38, F-box protein 38, [RH, Score=256, Expect=1e-69]} {Mouse: ENSMUSG00000042211, Fbxo38, F-box protein 38, [RH, Score=253, Expect=5e-69]} {Smed: dd_Smed_v6_7155_0_1, dd_Smed_v6_7155_0_1, [RH, Score=237, Expect=1e-63]} {RNA1509_10362, RNA1509_31016, RNA1509_55252, RNA1509_58294} {RNA1310_2269.1, RNA1509_10362, RNA1509_31016, RNA1509_55252, RNA1509_58294} {RNA1509_10362, RNA1509_31016, RNA1509_55252, RNA1509_58294, RNA815_7462} Mlig455_040922 {REF} {Length: 4084} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=33.0]; F-box domain [PF00646.35, score=20.4]} {Human: ENSG00000145868, FBXO38, F-box protein 38, [RH, Score=257, Expect=4e-70]} {Mouse: ENSMUSG00000042211, Fbxo38, F-box protein 38, [RH, Score=254, Expect=2e-69]} {Smed: dd_Smed_v6_7155_0_1, dd_Smed_v6_7155_0_1, [RH, Score=237, Expect=6e-64]} {RNA1509_10362, RNA1509_34456} {RNA1310_2269.1, RNA1509_34456} {RNA1509_34456, RNA815_7462}