TomoSeq data search

Data search

Results for MligTC455_39326

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_39326

1999

41.65

Mlig455_022274, Mlig455_048225

Neo: -

Age: Down-Up-Down

Mlig455_022274 {REF} {Length: 2062} {TRANSSPLICED} {RNA1509_46975} {RNA1310_17853} {RNA815_6898}

Mlig455_048225 {REF} {Length: 2039} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=22.8]} {RNA1509_46975, RNA1509_8509} {RNA1310_17853, RNA1509_46975, RNA1509_8509} {RNA1509_46975, RNA1509_8509, RNA815_6898}

Cumulative graph for MligTC455_39326

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.584	5.552	0.48286	1.00000
RegionR2	-0.359	5.552	0.41285	0.80598
RegionR3	-0.51	5.552	0.17169	0.69736
RegionR4	0.765	5.552	0.09608	0.29915
RegionR5	0.355	5.552	0.29619	0.63014
RegionR6	0.215	5.552	0.54977	1.00000
RegionR7	-0.124	5.552	0.76617	1.00000
RegionR8	0.242	5.552	0.59766	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.407	5.552	0.28253	0.98257
RegenerationR2	0.265	5.552	0.52692	0.88266
RegenerationR3	0.302	5.552	0.50682	0.85934
RegenerationR4	-0.273	5.552	0.56890	0.90089
RegenerationR5	-0.132	5.552	0.75608	0.97366
RegenerationR6	-0.289	5.552	0.51194	0.81482
RegenerationBL	0.892	5.552	0.02420	0.17091
RegenerationTP	0.171	5.552	0.71088	1.00000

Genes with expression patterns similar to MligTC455_39326

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39326	1999	41.65	Mlig455_022274, Mlig455_048225	Neo: - Age: Down-Up-Down		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_022274 {REF} {Length: 2062} {TRANSSPLICED} {RNA1509_46975} {RNA1310_17853} {RNA815_6898} Mlig455_048225 {REF} {Length: 2039} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=22.8]} {RNA1509_46975, RNA1509_8509} {RNA1310_17853, RNA1509_46975, RNA1509_8509} {RNA1509_46975, RNA1509_8509, RNA815_6898}
2.	MligTC455_45176	534	11.12	Mlig455_036711	Neo: - Age: -	GOLGA2	0.963	-	-	-	-	0.963	-	Mlig455_036711 {REF} {Length: 4819} {Pfam: Putative golgin subfamily A member 2-like protein 5 [PF15070.8, score=166.8]; Family with sequence similarity 184, A and B [PF15665.7, score=18.6]} {Human: ENSG00000167110, GOLGA2, golgin A2, [RH, Score=96.3, Expect=4e-20]} {Mouse: ENSMUSG00000002546, Golga2, golgi autoantigen, golgin subfamily a, 2, [RH, Score=165, Expect=3e-41]} {Dmel: FBgn0034697, GM130, Golgi matrix protein 130 kD, [RH, Score=80.1, Expect=6e-15]} {Celegans: WBGene00018017, golg-2, GOLGi associated coiled-coil protein homolog, [RH, Score=55.8, Expect=1e-07]} {Smed: dd_Smed_v6_6515_0_1, dd_Smed_v6_6515_0_1, [RH, Score=222, Expect=1e-60]} {RNA1509_16173} {RNA1310_2918, RNA1509_16173} {RNA1509_16173, RNA815_3140.1}
3.	MligTC455_46692	2748	57.25	Mlig455_025379	Neo: - Age: logFC(26M/2M)=0.646	QRICH2	0.96	-	-	-	0.960	-	-	Mlig455_025379 {REF} {Length: 1767} {Human: ENSG00000129646, QRICH2, glutamine rich 2, [Score=52.8, Expect=7e-07]} {RNA1509_26782} {RNA1310_19397.2} {RNA815_16071.1}
4.	MligTC455_52573	169	3.52	Mlig455_007124	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.344 Region-enriched R7: 3.137/0.00001		0.957	-	-	-	0.957	-	-	Mlig455_007124 {REF} {Length: 4234} {Pfam: Variant SH3 domain [PF07653.19, score=22.2]} {Mouse: ENSMUSG00000071636, Rimbp3, RIMS binding protein 3, [Score=52.4, Expect=4e-06]} {Smed: dd_Smed_v6_14584_0_1, dd_Smed_v6_14584_0_1, [RH, Score=160, Expect=3e-41]} {RNA1509_10978, RNA1509_44466} {RNA1310_1009.1, RNA1509_10978, RNA1509_44466} {RNA1509_10978, RNA1509_44466, RNA815_1316.1}
5.	MligTC455_52529	2079	43.31	Mlig455_046706	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.849 Region-enriched R7: 1.209/0.00023 Region-enriched R6: 1.021/0.00140 Regeneration-downregulated R6: -1.157 Regeneration-depleted R6: -1.157		0.955	-	-	-	0.955	-	-	Mlig455_046706 {REF} {Length: 1261} {TRANSSPLICED} {RNA1509_10993, RNA1509_11974} {RNA1310_12982.1, RNA1509_11974} {RNA1509_11974, RNA815_10633.1}

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