Data search
Results for MligTC455_52573
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52573 | 169 | 3.52 | Mlig455_007124 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.344 Region-enriched R7: 3.137/0.00001 |
Mlig455_007124 {REF} {Length: 4234} {Pfam: Variant SH3 domain [PF07653.19, score=22.2]} {Mouse: ENSMUSG00000071636, Rimbp3, RIMS binding protein 3, [Score=52.4, Expect=4e-06]} {Smed: dd_Smed_v6_14584_0_1, dd_Smed_v6_14584_0_1, [RH, Score=160, Expect=3e-41]} {RNA1509_10978, RNA1509_44466} {RNA1310_1009.1, RNA1509_10978, RNA1509_44466} {RNA1509_10978, RNA1509_44466, RNA815_1316.1} |
Cumulative graph for MligTC455_52573
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.783 | 2.198 | 0.32374 | 0.97293 | |
| RegionR2 | -0.766 | 2.198 | 0.34471 | 0.73710 | |
| RegionR3 | -0.481 | 2.198 | 0.46397 | 0.97287 | |
| RegionR4 | -0.885 | 2.198 | 0.25312 | 0.55337 | |
| RegionR5 | -2.683 | 2.198 | 0.00022 | 0.00315 | |
| RegionR6 | -1.755 | 2.198 | 0.02358 | 0.27907 | |
| RegionR7 | 3.137 | 2.198 | 0.00000 | 0.00001 | |
| RegionR8 | 1.651 | 2.198 | 0.11112 | 0.61898 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.898 | 2.198 | 0.15632 | 0.89944 | |
| RegenerationR2 | 0.341 | 2.198 | 0.59983 | 0.91545 | |
| RegenerationR3 | -0.042 | 2.198 | 0.94599 | 1.00000 | |
| RegenerationR4 | -0.084 | 2.198 | 0.91575 | 1.00000 | |
| RegenerationR5 | 0.394 | 2.198 | 0.63166 | 0.92295 | |
| RegenerationR6 | 1.566 | 2.198 | 0.05553 | 0.29558 | |
| RegenerationBL | 0.057 | 2.198 | 0.94264 | 1.00000 | |
| RegenerationTP | -1.422 | 2.198 | 0.07780 | 0.44548 |
Genes with expression patterns similar to MligTC455_52573
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52573 | 169 | 3.52 | Mlig455_007124 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.344 Region-enriched R7: 3.137/0.00001 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007124 {REF} {Length: 4234} {Pfam: Variant SH3 domain [PF07653.19, score=22.2]} {Mouse: ENSMUSG00000071636, Rimbp3, RIMS binding protein 3, [Score=52.4, Expect=4e-06]} {Smed: dd_Smed_v6_14584_0_1, dd_Smed_v6_14584_0_1, [RH, Score=160, Expect=3e-41]} {RNA1509_10978, RNA1509_44466} {RNA1310_1009.1, RNA1509_10978, RNA1509_44466} {RNA1509_10978, RNA1509_44466, RNA815_1316.1} | |
| 2. | MligTC455_49832 | 187 | 3.89 | Mlig455_016849, Mlig455_065922 | Neo: - Age: - |
SESTD1 | 1.759 | 0.786 | - | - | - | - | 0.973 | Mlig455_016849 {REF} {Length: 4773} {Human: ENSG00000187231, SESTD1, SEC14 and spectrin domain containing 1, [Score=55.5, Expect=7e-07]} {Mouse: ENSMUSG00000031442, Mcf2l, mcf.2 transforming sequence-like, [Score=60.1, Expect=2e-08]} {Smed: dd_Smed_v6_12952_0_1, dd_Smed_v6_12952_0_1, [Score=121, Expect=6e-28]} {RNA1509_22628} {RNA1310_1605.1} {RNA815_22526} Mlig455_065922 {REF} {Length: 4792} {Human: ENSG00000187231, SESTD1, SEC14 and spectrin domain containing 1, [Score=53.1, Expect=3e-06]} {Mouse: ENSMUSG00000031442, Mcf2l, mcf.2 transforming sequence-like, [Score=54.3, Expect=1e-06]; ENSMUSG00000042272, Sestd1, SEC14 and spectrin domains 1, [Score=53.5, Expect=2e-06]} {Smed: dd_Smed_v6_12952_0_1, dd_Smed_v6_12952_0_1, [RH, Score=129, Expect=2e-30]} {RNA1509_22628} {RNA1310_1605.1, RNA1509_22628} {RNA1509_22628, RNA815_22526} |
| 3. | MligTC455_24113 | 417 | 8.68 | Mlig455_051239 | Neo: - Age: Down-Up-Down Region-enriched R7: 2.866/0.00000 |
1.657 | 0.705 | - | - | - | - | 0.952 | Mlig455_051239 {REF} {Length: 4276} {NoTransDecoderORF} {RNA1509_23461} {RNA1310_60603} {RNA815_48925} | |
| 4. | MligTC455_22055 | 55 | 1.15 | Mlig455_002040 | Neo: - Age: - |
0.981 | - | - | - | - | - | 0.981 | Mlig455_002040 {REF} {Length: 671} {NoTransDecoderORF} | |
| 5. | MligTC455_13743 | 92 | 1.92 | Mlig455_046621 | Neo: - Age: - |
0.976 | - | - | - | - | - | 0.976 | Mlig455_046621 {REF} {Length: 1509} {RNA1310_97283} | |
| 6. | MligTC455_07182 | 156 | 3.26 | Mlig455_060033 | Neo: - Age: Down-Up-Up |
OXTR | 0.975 | - | - | - | - | - | 0.975 | Mlig455_060033 {REF} {Length: 1704} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=44.6]} {Human: ENSG00000180914, OXTR, oxytocin receptor, [Score=48.9, Expect=1e-05]} {Mouse: ENSMUSG00000049112, Oxtr, oxytocin receptor, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_27989_0_1, dd_Smed_v6_27989_0_1, [RH, Score=164, Expect=8e-47]} {RNA1310_22580} {RNA815_25223} |
| 7. | MligTC455_39326 | 1999 | 41.65 | Mlig455_022274, Mlig455_048225 | Neo: - Age: Down-Up-Down |
0.957 | - | - | - | 0.957 | - | - | Mlig455_022274 {REF} {Length: 2062} {TRANSSPLICED} {RNA1509_46975} {RNA1310_17853} {RNA815_6898} Mlig455_048225 {REF} {Length: 2039} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=22.8]} {RNA1509_46975, RNA1509_8509} {RNA1310_17853, RNA1509_46975, RNA1509_8509} {RNA1509_46975, RNA1509_8509, RNA815_6898} |
|
| 8. | MligTC455_49453 | 164 | 3.42 | Mlig455_021797 | Neo: - Age: Down-Up-Up Regeneration-depleted R3: -3.706 |
COL12A1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_021797 {REF} {Length: 2784} {Pfam: von Willebrand factor type A domain [PF00092.30, score=121.0]; von Willebrand factor type A domain [PF13519.8, score=59.4]; von Willebrand factor type A domain [PF13768.8, score=32.5]} {Human: ENSG00000111799, COL12A1, collagen type XII alpha 1 chain, [RH, Score=89.7, Expect=7e-18]} {Mouse: ENSMUSG00000022324, Matn2, matrilin 2, [RH, Score=88.2, Expect=7e-19]} {Celegans: WBGene00000853, cut-6, CUTiclin, [RH, Score=76.3, Expect=2e-14]} {Smed: dd_Smed_v6_7616_0_1, dd_Smed_v6_7616_0_1, [Score=67.8, Expect=5e-12]} {RNA1509_16895} {RNA1310_9807.1, RNA1509_16895} {RNA1509_16895, RNA815_3739} |
| 9. | MligTC455_49361 | 59 | 1.23 | Mlig455_052806 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_052806 {REF} {Length: 2973} {Pfam: F5/8 type C domain [PF00754.27, score=25.2]} {Smed: dd_Smed_v6_36585_0_1, dd_Smed_v6_36585_0_1, [Score=46.2, Expect=5e-06]} {RNA1310_23370} {RNA815_18000} | |
| 10. | MligTC455_38412 | 204 | 4.25 | Mlig455_024382 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_024382 {REF} {Length: 1491} {RNA1509_35191} {RNA1310_126.1} {RNA815_35412} | |
| 11. | MligTC455_49829 | 606 | 12.63 | Mlig455_018528 | Neo: - Age: - Region-enriched R8: 5.323/0.00000 |
0.95 | - | - | - | - | - | 0.950 | Mlig455_018528 {REF} {Length: 3314} {Pfam: Plectin repeat [PF00681.22, score=39.5]; SH3 domain [PF17902.3, score=22.5]} {Dmel: FBgn0013733, shot, short stop, [Score=57.0, Expect=9e-08]} {Celegans: WBGene00006952, wrt-6, Warthog protein 6 Warthog protein 6 N-product Warthog protein 6 C-product, [Score=51.2, Expect=3e-06]} {RNA1509_40966} {RNA1310_5072.1} {RNA815_12828} |
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