Data search
Results for MligTC455_39327
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39327 | 328 | 6.84 | Mlig455_024171 | Neo: - Age: Down-Up-Down |
Mlig455_024171 {REF} {Length: 3746} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=23.0]; C2H2-type zinc finger [PF13894.8, score=21.7]} {RNA1509_11419} {RNA1310_2995} {RNA815_8752.1} |
Cumulative graph for MligTC455_39327
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.187 | 3.324 | 0.93508 | 1.00000 | |
| RegionR2 | -0.459 | 3.324 | 0.48163 | 0.86521 | |
| RegionR3 | -0.032 | 3.324 | 0.95760 | 1.00000 | |
| RegionR4 | 0.758 | 3.324 | 0.21730 | 0.50467 | |
| RegionR5 | 0.351 | 3.324 | 0.44986 | 0.81149 | |
| RegionR6 | -0.126 | 3.324 | 0.82465 | 1.00000 | |
| RegionR7 | 0.195 | 3.324 | 0.79166 | 1.00000 | |
| RegionR8 | -0.874 | 3.324 | 0.46219 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.165 | 3.324 | 0.28103 | 0.98107 | |
| RegenerationR2 | 0.563 | 3.324 | 0.17033 | 0.60959 | |
| RegenerationR3 | 0.056 | 3.324 | 0.91840 | 1.00000 | |
| RegenerationR4 | 0.036 | 3.324 | 0.94873 | 1.00000 | |
| RegenerationR5 | 0.339 | 3.324 | 0.43512 | 0.82146 | |
| RegenerationR6 | 0.533 | 3.324 | 0.29153 | 0.64187 | |
| RegenerationBL | 0.82 | 3.324 | 0.22753 | 0.57758 | |
| RegenerationTP | 0.35 | 3.324 | 0.67821 | 1.00000 |
Genes with expression patterns similar to MligTC455_39327
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39327 | 328 | 6.84 | Mlig455_024171 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024171 {REF} {Length: 3746} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=23.0]; C2H2-type zinc finger [PF13894.8, score=21.7]} {RNA1509_11419} {RNA1310_2995} {RNA815_8752.1} | |
| 2. | MligTC455_39328 | 318 | 6.62 | Mlig455_024190 | Neo: - Age: - |
5.843 | 0.992 | 0.987 | 0.995 | 0.951 | 0.984 | 0.934 | Mlig455_024190 {REF} {Length: 3749} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=23.0]; C2H2-type zinc finger [PF13894.8, score=21.7]} {RNA1509_11419, RNA1509_41951, RNA1509_49639, RNA1509_56988} {RNA1310_2995, RNA1509_41951, RNA1509_49639, RNA1509_56988} {RNA1509_41951, RNA1509_49639, RNA1509_56988, RNA815_8752.1} | |
| 3. | MligTC455_49630 | 790 | 16.45 | Mlig455_043592 | Neo: - Age: - |
2.599 | - | - | 0.833 | 0.805 | 0.961 | - | Mlig455_043592 {REF} {Length: 892} {NoTransDecoderORF} {RNA1509_17254} {RNA1310_20885} {RNA815_8392} | |
| 4. | MligTC455_43801 | 509 | 10.6 | Mlig455_057114 | Neo: - Age: logFC(26M/2M)=0.230 |
SLC35E1 | 1.683 | - | - | 0.724 | - | - | 0.959 | Mlig455_057114 {REF} {Length: 5842} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=297.4]; EamA-like transporter family [PF00892.22, score=57.8]; UAA transporter family [PF08449.13, score=30.3]} {Human: ENSG00000127526, SLC35E1, solute carrier family 35 member E1, [RH, Score=327, Expect=2e-108]} {Mouse: ENSMUSG00000019731, Slc35e1, solute carrier family 35, member E1, [RH, Score=321, Expect=3e-106]} {Dmel: FBgn0031183, CG14621, [RH, Score=301, Expect=3e-99]} {Smed: dd_Smed_v6_5304_0_1, dd_Smed_v6_5304_0_1, [RH, Score=315, Expect=3e-104]} {RNA1509_36491, RNA1509_46707} {RNA1310_20214, RNA1509_36491, RNA1509_46707} {RNA1509_36491, RNA1509_46707, RNA815_9941} |
| 5. | MligTC455_24291 | 259 | 5.39 | Mlig455_064729 | Neo: - Age: - |
0.987 | - | - | - | - | - | 0.987 | Mlig455_064729 {REF} {Length: 1341} {NoTransDecoderORF} {RNA1509_32024} {RNA1310_90632} {RNA815_40694} | |
| 6. | MligTC455_24290 | 617 | 12.85 | Mlig455_004537, Mlig455_028539 | Neo: - Age: - |
NFYB | 0.976 | - | - | - | - | - | 0.976 | Mlig455_004537 {REF} {Length: 2183} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=92.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.4]} {Human: ENSG00000120837, NFYB, nuclear transcription factor Y subunit beta, [RH, Score=157, Expect=2e-48]} {Mouse: ENSMUSG00000020248, Nfyb, nuclear transcription factor-Y beta, [RH, Score=157, Expect=1e-48]} {Dmel: FBgn0032816, Nf-YB, Nuclear factor Y-box B, [RH, Score=139, Expect=3e-42]} {Celegans: WBGene00021132, nfyb-1, Nuclear transcription Factor Y, B (Beta) subunit, [RH, Score=125, Expect=8e-35]} {Smed: dd_Smed_v6_2532_0_1, dd_Smed_v6_2532_0_1, [RH, Score=160, Expect=6e-50]} {RNA1509_13566, RNA1509_32024} {RNA1310_44394, RNA1509_32024} {RNA1509_32024, RNA815_16021} Mlig455_028539 {REF} {Length: 2185} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=92.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.4]} {Human: ENSG00000120837, NFYB, nuclear transcription factor Y subunit beta, [RH, Score=157, Expect=2e-48]} {Mouse: ENSMUSG00000020248, Nfyb, nuclear transcription factor-Y beta, [RH, Score=157, Expect=1e-48]} {Dmel: FBgn0032816, Nf-YB, Nuclear factor Y-box B, [RH, Score=139, Expect=3e-42]} {Celegans: WBGene00021132, nfyb-1, Nuclear transcription Factor Y, B (Beta) subunit, [RH, Score=125, Expect=8e-35]} {Smed: dd_Smed_v6_2532_0_1, dd_Smed_v6_2532_0_1, [RH, Score=160, Expect=6e-50]} {RNA1509_13566} {RNA1310_44394, RNA1509_13566} {RNA1509_13566, RNA815_16021} |
| 7. | MligTC455_36809 | 2545 | 53.03 | Mlig455_031988, Mlig455_032040 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.264 Regeneration-upregulated BL: 1.259 Regeneration-enriched BL: 1.259 |
0.973 | - | - | - | 0.973 | - | - | Mlig455_031988 {REF} {Length: 5660} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=19.0]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_46072, RNA1509_8892} {RNA1310_3692.1, RNA1509_46072} {RNA1509_46072, RNA815_13257.1} Mlig455_032040 {REF} {Length: 5830} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.3]; UBA/TS-N domain [PF00627.33, score=19.2]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_8892} {RNA1310_3692.1, RNA1509_8892} {RNA1509_8892, RNA815_13257.1} |
|
| 8. | MligTC455_36808 | 1241 | 25.85 | Mlig455_031991 | Neo: - Age: - |
0.972 | - | - | - | 0.972 | - | - | Mlig455_031991 {REF} {Length: 6075} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.3]; UBA/TS-N domain [PF00627.33, score=19.2]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588, RNA1509_8892} {RNA1310_3692.1, RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588} {RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588, RNA815_13257.1} | |
| 9. | MligTC455_17463 | 489 | 10.18 | Mlig455_059241 | Neo: - Age: Up-Down-Down Region-enriched R2: 1.629/0.02460 |
0.967 | - | - | - | - | 0.967 | - | Mlig455_059241 {REF} {Length: 2526} {RNA1509_31499, RNA1509_46155} {RNA1310_49073, RNA1509_31499, RNA1509_46155} {RNA1509_31499, RNA1509_46155, RNA815_25441} | |
| 10. | MligTC455_21538 | 956 | 19.92 | Mlig455_020760 | Neo: - Age: logFC(26M/2M)=-0.321 |
ZNF687 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_020760 {REF} {Length: 4406} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=29.7]; Zinc finger, C2H2 type [PF00096.28, score=27.3]; GAGA factor [PF09237.13, score=19.8]} {Human: ENSG00000143373, ZNF687, zinc finger protein 687, [RH, Score=102, Expect=2e-21]} {Mouse: ENSMUSG00000019338, Zfp687, zinc finger protein 687, [RH, Score=106, Expect=7e-23]} {Dmel: FBgn0004893, bowl, brother of odd with entrails limited, [Score=57.8, Expect=4e-08]} {Celegans: WBGene00003015, lin-29, Transcription factor, [Score=52.4, Expect=1e-06]} {RNA1509_4433} {RNA1310_2143.1} {RNA815_12738} |
| 11. | MligTC455_23244 | 640 | 13.33 | Mlig455_015918 | Neo: - Age: - |
0.965 | - | - | - | - | - | 0.965 | Mlig455_015918 {REF} {Length: 3667} {TRANSSPLICED} {RNA1509_31275, RNA1509_58259} {RNA1310_25623, RNA1509_58259} {RNA1509_58259, RNA815_11247} | |
| 12. | MligTC455_50612 | 274 | 5.7 | Mlig455_006616 | Neo: - Age: - |
APP | 0.963 | - | - | - | - | - | 0.963 | Mlig455_006616 {REF} {Length: 5834} {Pfam: Copper-binding of amyloid precursor, CuBD [PF12924.9, score=57.0]; Amyloid A4 N-terminal heparin-binding [PF02177.18, score=48.1]; Beta-amyloid precursor protein C-terminus [PF10515.11, score=33.3]; E2 domain of amyloid precursor protein [PF12925.9, score=25.6]} {Human: ENSG00000142192, APP, amyloid beta precursor protein, [RH, Score=114, Expect=6e-26]} {Mouse: ENSMUSG00000022892, App, amyloid beta (A4) precursor protein, [RH, Score=116, Expect=7e-27]} {Dmel: FBgn0000108, Appl, beta amyloid protein precursor-like, [RH, Score=103, Expect=9e-23]} {Celegans: WBGene00000149, apl-1, Beta-amyloid-like protein, [Score=88.6, Expect=3e-18]} {Smed: dd_Smed_v6_2561_0_1, dd_Smed_v6_2561_0_1, [Score=114, Expect=1e-26]} {RNA1509_8173} {RNA1310_12267} {RNA815_6032.1} |
| 13. | MligTC455_42110 | 2111 | 43.98 | Mlig455_003488 | Neo: - Age: - |
PRDX4 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_003488 {REF} {Length: 1973} {Pfam: AhpC/TSA family [PF00578.23, score=125.2]; Redoxin [PF08534.12, score=53.1]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=51.1]} {Human: ENSG00000123131, PRDX4, peroxiredoxin 4, [Score=323, Expect=2e-112]} {Mouse: ENSMUSG00000025289, Prdx4, peroxiredoxin 4, [Score=324, Expect=4e-113]} {Dmel: FBgn0040308, Jafrac2, Thioredoxin peroxidase 2, [Score=317, Expect=8e-111]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [Score=266, Expect=1e-91]} {Smed: dd_Smed_v6_3414_0_1, dd_Smed_v6_3414_0_1, [Score=322, Expect=1e-112]} {RNA1509_16873} {RNA1310_13724} {RNA815_4645.1} |
| 14. | MligTC455_47700 | 785 | 16.36 | Mlig455_048966 | Neo: - Age: - |
PDCD6 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_048966 {REF} {Length: 1141} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=80.4]; EF-hand domain [PF13405.8, score=78.6]; EF hand [PF00036.34, score=68.6]; EF-hand domain pair [PF13833.8, score=60.9]; EF hand [PF13202.8, score=42.0]; EF-hand domain [PF14658.8, score=19.9]} {Human: ENSG00000249915, PDCD6, programmed cell death 6, [RH, Score=225, Expect=2e-75]} {Mouse: ENSMUSG00000021576, Pdcd6, programmed cell death 6, [RH, Score=224, Expect=6e-75]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [RH, Score=242, Expect=1e-82]} {Celegans: WBGene00019770, M04F3.4, [RH, Score=211, Expect=1e-70]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [RH, Score=249, Expect=1e-85]} {RNA1509_29960, RNA1509_8800} {RNA1310_29119.1, RNA1509_29960, RNA1509_8800} {RNA1509_29960, RNA1509_8800, RNA815_13585} |
| 15. | MligTC455_16572 | 1302 | 27.13 | Mlig455_048185 | Neo: Irradiation Age: Up-Down-Up Region-specific R4: 2.077 Region-enriched R4: 1.102/0.04564 |
SRPK2 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_048185 {REF} {Length: 4554} {Pfam: Laminin G domain [PF02210.26, score=101.3]; Laminin G domain [PF00054.25, score=81.5]; Protein kinase domain [PF00069.27, score=22.3]; EGF-like domain [PF00008.29, score=19.6]} {Human: ENSG00000135250, SRPK2, SRSF protein kinase 2, [Score=139, Expect=7e-37]; ENSG00000184343, SRPK3, SRSF protein kinase 3, [Score=135, Expect=4e-33]} {Mouse: ENSMUSG00000062604, Srpk2, serine/arginine-rich protein specific kinase 2, [Score=137, Expect=7e-33]; ENSMUSG00000002007, Srpk3, serine/arginine-rich protein specific kinase 3, [Score=137, Expect=2e-33]; ENSMUSG00000004865, Srpk1, serine/arginine-rich protein specific kinase 1, [Score=132, Expect=1e-31]} {Dmel: FBgn0038975, Nrx-1, Neurexin 1, [Score=147, Expect=6e-36]} {Celegans: WBGene00004980, spk-1, Serine/threonine-protein kinase spk-1, [Score=140, Expect=8e-34]} {Smed: dd_Smed_v6_4202_0_1, dd_Smed_v6_4202_0_1, [Score=146, Expect=4e-36]} {RNA1509_39507} {RNA1310_2294} {RNA815_22312} |
| 16. | MligTC455_21537 | 1413 | 29.43 | Mlig455_020692 | Neo: - Age: - |
ZNF687 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_020692 {REF} {Length: 6162} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=28.8]; Zinc finger, C2H2 type [PF00096.28, score=26.0]; GAGA factor [PF09237.13, score=19.7]} {Human: ENSG00000143373, ZNF687, zinc finger protein 687, [RH, Score=102, Expect=2e-21]} {Mouse: ENSMUSG00000019338, Zfp687, zinc finger protein 687, [RH, Score=106, Expect=8e-23]} {Dmel: FBgn0004893, bowl, brother of odd with entrails limited, [Score=58.2, Expect=4e-08]} {Celegans: WBGene00003015, lin-29, Transcription factor, [Score=52.4, Expect=1e-06]} {RNA1509_12462, RNA1509_15125, RNA1509_29958, RNA1509_30146, RNA1509_4433} {RNA1310_2143.1, RNA1509_12462, RNA1509_15125, RNA1509_29958, RNA1509_30146, RNA1509_4433} {RNA1509_12462, RNA1509_15125, RNA1509_29958, RNA1509_30146, RNA1509_4433, RNA815_12738} |
| 17. | MligTC455_43108 | 812 | 16.91 | Mlig455_017815 | Neo: - Age: - |
SEL1L | 0.954 | - | - | - | - | - | 0.954 | Mlig455_017815 {REF} {Length: 4083} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=128.1]} {Human: ENSG00000071537, SEL1L, SEL1L, ERAD E3 ligase adaptor subunit, [RH, Score=574, Expect=0.0]} {Mouse: ENSMUSG00000020964, Sel1l, sel-1 suppressor of lin-12-like (C. elegans), [RH, Score=578, Expect=0.0]} {Dmel: FBgn0028475, Hrd3, HMG-coA reductase degradation 3, [RH, Score=462, Expect=5e-149]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [RH, Score=442, Expect=6e-143]} {Smed: dd_Smed_v6_3464_0_1, dd_Smed_v6_3464_0_1, [RH, Score=554, Expect=0.0]} {RNA1509_41995, RNA1509_51735, RNA1509_54114} {RNA1310_4441, RNA1509_41995, RNA1509_51735, RNA1509_54114} {RNA1509_41995, RNA1509_51735, RNA1509_54114, RNA815_1031.1} |
| 18. | MligTC455_18173 | 400 | 8.33 | Mlig455_004552 | Neo: - Age: Up-Down-Up |
LMO7 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_004552 {REF} {Length: 5115} {TRANSSPLICED} {Pfam: Calponin homology (CH) domain [PF00307.33, score=50.7]; LIM domain [PF00412.24, score=27.5]; CAMSAP CH domain [PF11971.10, score=21.5]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=94.7, Expect=4e-19]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=6e-19]} {Dmel: FBgn0263346, CG43427, [RH, Score=126, Expect=4e-29]} {Celegans: WBGene00017904, lim-8, LIM domain family, [RH, Score=115, Expect=8e-26]} {Smed: dd_Smed_v6_10011_0_1, dd_Smed_v6_10011_0_1, [Score=80.9, Expect=2e-15]} {RNA1509_58786} {RNA1310_2926} {RNA815_2775.1} |
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