Data search
Results for MligTC455_36809
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36809 | 2545 | 53.03 | Mlig455_031988, Mlig455_032040 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.264 Regeneration-upregulated BL: 1.259 Regeneration-enriched BL: 1.259 |
Mlig455_031988 {REF} {Length: 5660} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=19.0]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_46072, RNA1509_8892} {RNA1310_3692.1, RNA1509_46072} {RNA1509_46072, RNA815_13257.1} Mlig455_032040 {REF} {Length: 5830} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.3]; UBA/TS-N domain [PF00627.33, score=19.2]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_8892} {RNA1310_3692.1, RNA1509_8892} {RNA1509_8892, RNA815_13257.1} |
Cumulative graph for MligTC455_36809
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.548 | 5.911 | 0.38100 | 1.00000 | |
| RegionR2 | 0.013 | 5.911 | 0.96975 | 1.00000 | |
| RegionR3 | -0.063 | 5.911 | 0.82024 | 1.00000 | |
| RegionR4 | 0.178 | 5.911 | 0.58444 | 0.90026 | |
| RegionR5 | 0.132 | 5.911 | 0.60113 | 0.95836 | |
| RegionR6 | 0.223 | 5.911 | 0.40805 | 0.97722 | |
| RegionR7 | 0.075 | 5.911 | 0.81416 | 1.00000 | |
| RegionR8 | -1.106 | 5.911 | 0.01807 | 0.26150 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.109 | 5.911 | 0.21969 | 0.95484 | |
| RegenerationR2 | 0.68 | 5.911 | 0.02322 | 0.25024 | |
| RegenerationR3 | 0.409 | 5.911 | 0.21307 | 0.64882 | |
| RegenerationR4 | 0.214 | 5.911 | 0.53160 | 0.88462 | |
| RegenerationR5 | 0.114 | 5.911 | 0.71423 | 0.95759 | |
| RegenerationR6 | 0.216 | 5.911 | 0.50493 | 0.80975 | |
| RegenerationBL | 1.259 | 5.911 | 0.00012 | 0.00527 | Specific for BL: 1.259 |
| RegenerationTP | -0.324 | 5.911 | 0.45366 | 0.87008 |
Genes with expression patterns similar to MligTC455_36809
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36809 | 2545 | 53.03 | Mlig455_031988, Mlig455_032040 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.264 Regeneration-upregulated BL: 1.259 Regeneration-enriched BL: 1.259 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031988 {REF} {Length: 5660} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=19.0]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_46072, RNA1509_8892} {RNA1310_3692.1, RNA1509_46072} {RNA1509_46072, RNA815_13257.1} Mlig455_032040 {REF} {Length: 5830} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.3]; UBA/TS-N domain [PF00627.33, score=19.2]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_8892} {RNA1310_3692.1, RNA1509_8892} {RNA1509_8892, RNA815_13257.1} |
|
| 2. | MligTC455_36808 | 1241 | 25.85 | Mlig455_031991 | Neo: - Age: - |
5.934 | 0.997 | 0.993 | 0.994 | 0.995 | 0.993 | 0.962 | Mlig455_031991 {REF} {Length: 6075} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.3]; UBA/TS-N domain [PF00627.33, score=19.2]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588, RNA1509_8892} {RNA1310_3692.1, RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588} {RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588, RNA815_13257.1} | |
| 3. | MligTC455_21537 | 1413 | 29.43 | Mlig455_020692 | Neo: - Age: - |
ZNF687 | 2.467 | - | - | 0.720 | 0.952 | - | 0.795 | Mlig455_020692 {REF} {Length: 6162} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=28.8]; Zinc finger, C2H2 type [PF00096.28, score=26.0]; GAGA factor [PF09237.13, score=19.7]} {Human: ENSG00000143373, ZNF687, zinc finger protein 687, [RH, Score=102, Expect=2e-21]} {Mouse: ENSMUSG00000019338, Zfp687, zinc finger protein 687, [RH, Score=106, Expect=8e-23]} {Dmel: FBgn0004893, bowl, brother of odd with entrails limited, [Score=58.2, Expect=4e-08]} {Celegans: WBGene00003015, lin-29, Transcription factor, [Score=52.4, Expect=1e-06]} {RNA1509_12462, RNA1509_15125, RNA1509_29958, RNA1509_30146, RNA1509_4433} {RNA1310_2143.1, RNA1509_12462, RNA1509_15125, RNA1509_29958, RNA1509_30146, RNA1509_4433} {RNA1509_12462, RNA1509_15125, RNA1509_29958, RNA1509_30146, RNA1509_4433, RNA815_12738} |
| 4. | MligTC455_45780 | 1319 | 27.49 | Mlig455_034009, Mlig455_060388 | Neo: - Age: - Region-enriched R4: 1.293/0.00518 Regeneration-upregulated BL: 1.725 Regeneration-enriched BL: 1.725 |
STRN3 | 2.45 | - | 0.757 | - | 0.969 | - | 0.724 | Mlig455_034009 {REF} {Length: 4926} {Pfam: Striatin family [PF08232.14, score=152.1]; WD domain, G-beta repeat [PF00400.34, score=106.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.2]} {Human: ENSG00000196792, STRN3, striatin 3, [Score=313, Expect=9e-94]; ENSG00000115808, STRN, striatin, [Score=308, Expect=4e-92]; ENSG00000090372, STRN4, striatin 4, [Score=301, Expect=8e-91]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [Score=485, Expect=3e-159]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [Score=303, Expect=6e-91]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [RH, Score=283, Expect=4e-84]} {Smed: dd_Smed_v6_8286_0_1, dd_Smed_v6_8286_0_1, [Score=266, Expect=3e-77]} {RNA1509_18009, RNA1509_4159, RNA1509_8508} {RNA1310_1645.1, RNA1509_18009, RNA1509_8508} {RNA1509_18009, RNA1509_8508, RNA815_5062} Mlig455_060388 {REF} {Length: 5034} {Pfam: Striatin family [PF08232.14, score=152.1]; WD domain, G-beta repeat [PF00400.34, score=106.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.0]} {Human: ENSG00000196792, STRN3, striatin 3, [Score=312, Expect=2e-93]; ENSG00000115808, STRN, striatin, [Score=308, Expect=8e-92]; ENSG00000090372, STRN4, striatin 4, [Score=300, Expect=2e-90]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [Score=484, Expect=7e-159]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [Score=303, Expect=8e-91]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [RH, Score=283, Expect=6e-84]} {Smed: dd_Smed_v6_8286_0_1, dd_Smed_v6_8286_0_1, [Score=266, Expect=6e-77]} {RNA1509_41485, RNA1509_4159} {RNA1310_1645.1, RNA1509_41485, RNA1509_4159} {RNA1509_41485, RNA1509_4159, RNA815_5062} |
| 5. | MligTC455_21538 | 956 | 19.92 | Mlig455_020760 | Neo: - Age: logFC(26M/2M)=-0.321 |
ZNF687 | 1.735 | - | - | - | 0.972 | - | 0.763 | Mlig455_020760 {REF} {Length: 4406} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=29.7]; Zinc finger, C2H2 type [PF00096.28, score=27.3]; GAGA factor [PF09237.13, score=19.8]} {Human: ENSG00000143373, ZNF687, zinc finger protein 687, [RH, Score=102, Expect=2e-21]} {Mouse: ENSMUSG00000019338, Zfp687, zinc finger protein 687, [RH, Score=106, Expect=7e-23]} {Dmel: FBgn0004893, bowl, brother of odd with entrails limited, [Score=57.8, Expect=4e-08]} {Celegans: WBGene00003015, lin-29, Transcription factor, [Score=52.4, Expect=1e-06]} {RNA1509_4433} {RNA1310_2143.1} {RNA815_12738} |
| 6. | MligTC455_42505 | 927 | 19.32 | Mlig455_044650 | Neo: - Age: Up-Down-Down |
SPEN | 1.695 | - | - | 0.741 | 0.954 | - | - | Mlig455_044650 {REF} {Length: 10984} {Pfam: SPOC domain [PF07744.15, score=106.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.5]; Occluded RNA-recognition motif [PF16842.7, score=26.0]} {Human: ENSG00000065526, SPEN, spen family transcriptional repressor, [RH, Score=226, Expect=4e-58]} {Mouse: ENSMUSG00000040761, Spen, spen family transcription repressor, [RH, Score=226, Expect=4e-58]} {Dmel: FBgn0016977, spen, split ends, [RH, Score=215, Expect=6e-55]} {Celegans: WBGene00008549, din-1, Daf-12-interacting protein 1, [RH, Score=94.0, Expect=2e-18]} {Smed: dd_Smed_v6_6458_0_1, dd_Smed_v6_6458_0_1, [RH, Score=189, Expect=1e-47]} {RNA1509_1038, RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345} {RNA1310_36.2, RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345} {RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345, RNA815_326} |
| 7. | MligTC455_24879 | 857 | 17.85 | Mlig455_069172 | Neo: Int S/G2/M Age: - |
LIMS2 | 0.975 | - | - | - | 0.975 | - | - | Mlig455_069172 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=202.3]} {Human: ENSG00000072163, LIMS2, LIM zinc finger domain containing 2, [RH, Score=369, Expect=6e-126]; ENSG00000256977, LIMS3, LIM zinc finger domain containing 3, [RH, Score=368, Expect=4e-125]; ENSG00000256671, LIMS4, LIM zinc finger domain containing 4, [RH, Score=368, Expect=4e-125]; ENSG00000169756, LIMS1, LIM zinc finger domain containing 1, [RH, Score=365, Expect=2e-124]} {Mouse: ENSMUSG00000019920, Lims1, LIM and senescent cell antigen-like domains 1, [RH, Score=372, Expect=1e-126]; ENSMUSG00000024395, Lims2, LIM and senescent cell antigen like domains 2, [RH, Score=358, Expect=4e-122]} {Dmel: FBgn0020249, stck, steamer duck, [RH, Score=387, Expect=2e-133]} {Celegans: WBGene00006826, unc-97, LIM domain-containing protein unc-97, [RH, Score=377, Expect=1e-129]} {Smed: dd_Smed_v6_2476_0_1, dd_Smed_v6_2476_0_1, [RH, Score=427, Expect=2e-149]} {RNA1509_58964} {RNA1310_13680.2} {RNA815_4936.1} |
| 8. | MligTC455_39327 | 328 | 6.84 | Mlig455_024171 | Neo: - Age: Down-Up-Down |
0.973 | - | - | - | 0.973 | - | - | Mlig455_024171 {REF} {Length: 3746} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=23.0]; C2H2-type zinc finger [PF13894.8, score=21.7]} {RNA1509_11419} {RNA1310_2995} {RNA815_8752.1} | |
| 9. | MligTC455_24878 | 969 | 20.2 | Mlig455_045252 | Neo: - Age: logFC(26M/2M)=1.306 Region-enriched R5: 1.363/0.04356 |
LIMS2 | 0.969 | - | - | - | 0.969 | - | - | Mlig455_045252 {REF} {Length: 1439} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=76.2]} {Human: ENSG00000072163, LIMS2, LIM zinc finger domain containing 2, [Score=92.0, Expect=3e-21]; ENSG00000256671, LIMS4, LIM zinc finger domain containing 4, [Score=87.8, Expect=1e-19]; ENSG00000256977, LIMS3, LIM zinc finger domain containing 3, [Score=87.8, Expect=1e-19]} {Mouse: ENSMUSG00000024395, Lims2, LIM and senescent cell antigen like domains 2, [Score=88.6, Expect=3e-20]; ENSMUSG00000019920, Lims1, LIM and senescent cell antigen-like domains 1, [Score=88.2, Expect=6e-20]} {Dmel: FBgn0020249, stck, steamer duck, [Score=101, Expect=4e-25]} {Celegans: WBGene00006826, unc-97, LIM domain-containing protein unc-97, [Score=107, Expect=2e-27]} {Smed: dd_Smed_v6_2476_0_1, dd_Smed_v6_2476_0_1, [Score=108, Expect=4e-28]} {RNA1509_24514} {RNA1310_13269.1} {RNA815_4936.1} |
| 10. | MligTC455_42419 | 621 | 12.93 | Mlig455_003425 | Neo: - Age: Up-Up-Down |
USP2 | 0.969 | - | - | - | 0.969 | - | - | Mlig455_003425 {REF} {Length: 4721} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=252.4]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=54.8]} {Human: ENSG00000036672, USP2, ubiquitin specific peptidase 2, [RH, Score=305, Expect=2e-96]} {Mouse: ENSMUSG00000032010, Usp2, ubiquitin specific peptidase 2, [RH, Score=304, Expect=7e-96]} {Dmel: FBgn0031187, Usp2, Ubiquitin specific protease 2, [Score=290, Expect=4e-91]} {Celegans: WBGene00013506, usp-3, Ubiquitinyl hydrolase 1, [Score=162, Expect=8e-44]} {Smed: dd_Smed_v6_7150_0_4, dd_Smed_v6_7150_0_4, [Score=322, Expect=7e-104]} {RNA1509_15893, RNA1509_20058, RNA1509_33528} {RNA1310_15857, RNA1509_15893, RNA1509_20058, RNA1509_33528} {RNA1509_15893, RNA1509_20058, RNA1509_33528, RNA815_14528} |
| 11. | MligTC455_33116 | 1217 | 25.35 | Mlig455_042734, Mlig455_063152 | Neo: - Age: Up-Down-Down Region-enriched R5: 1.296/0.01110 |
LDB2 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_042734 {REF} {Length: 5440} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=81.8]; DSBA-like thioredoxin domain [PF01323.22, score=52.4]; LIM interaction domain (LID) [PF17916.3, score=24.7]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=194, Expect=9e-55]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=190, Expect=1e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=170, Expect=6e-45]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=82.4, Expect=4e-16]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=174, Expect=2e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469} Mlig455_063152 {REF} {Length: 6235} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=78.1]; LIM interaction domain (LID) [PF17916.3, score=24.9]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=187, Expect=4e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=172, Expect=6e-46]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=80.5, Expect=2e-15]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=172, Expect=7e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469} |
| 12. | MligTC455_11853 | 353 | 7.36 | Mlig455_015753 | Neo: - Age: - |
0.954 | - | - | - | 0.954 | - | - | Mlig455_015753 {REF} {Length: 2434} {RNA1509_12736, RNA1509_54771} {RNA1310_62175.1, RNA1509_12736} {RNA1509_12736, RNA815_11103} |