Data search
Results for MligTC455_39344
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39344 | 227 | 4.73 | Mlig455_031617 | Neo: Int S/G2/M Age: - |
POLE2 | Mlig455_031617 {REF} {Length: 2834} {TRANSSPLICED} {Pfam: DNA polymerase alpha/epsilon subunit B [PF04042.18, score=133.4]; DNA polymerases epsilon N terminal [PF12213.10, score=33.0]} {Human: ENSG00000100479, POLE2, DNA polymerase epsilon 2, accessory subunit, [RH, Score=344, Expect=9e-112]} {Mouse: ENSMUSG00000020974, Pole2, polymerase (DNA directed), epsilon 2 (p59 subunit), [RH, Score=339, Expect=7e-110]} {Dmel: FBgn0035644, DNApol-epsilon58, DNA polymerase epsilon 58kD subunit, [RH, Score=266, Expect=5e-82]} {Celegans: WBGene00017237, pole-2, Probable DNA polymerase epsilon subunit 2, [RH, Score=209, Expect=1e-60]} {Smed: dd_Smed_v6_16802_0_1, dd_Smed_v6_16802_0_1, [RH, Score=238, Expect=2e-71]} {RNA1509_55428} {RNA1310_25376, RNA1509_55428} {RNA1509_55428, RNA815_30212} |
Cumulative graph for MligTC455_39344
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.915 | 2.937 | 0.57972 | 1.00000 | |
| RegionR2 | -0.235 | 2.937 | 0.75529 | 1.00000 | |
| RegionR3 | -0.291 | 2.937 | 0.61211 | 1.00000 | |
| RegionR4 | 0.269 | 2.937 | 0.66777 | 0.96546 | |
| RegionR5 | 1.099 | 2.937 | 0.01463 | 0.07678 | |
| RegionR6 | 0.525 | 2.937 | 0.33392 | 0.92180 | |
| RegionR7 | -0.442 | 2.937 | 0.58458 | 1.00000 | |
| RegionR8 | -0.012 | 2.937 | 0.99383 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.871 | 2.937 | 0.39506 | 1.00000 | |
| RegenerationR2 | -0.427 | 2.937 | 0.50232 | 0.87237 | |
| RegenerationR3 | -0.032 | 2.937 | 0.95741 | 1.00000 | |
| RegenerationR4 | -0.412 | 2.937 | 0.49885 | 0.86900 | |
| RegenerationR5 | -0.62 | 2.937 | 0.24896 | 0.68270 | |
| RegenerationR6 | -0.25 | 2.937 | 0.68430 | 0.91651 | |
| RegenerationBL | -0.5 | 2.937 | 0.57114 | 0.92461 | |
| RegenerationTP | -2.491 | 2.937 | 0.05689 | 0.38812 |
Genes with expression patterns similar to MligTC455_39344
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39344 | 227 | 4.73 | Mlig455_031617 | Neo: Int S/G2/M Age: - |
POLE2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031617 {REF} {Length: 2834} {TRANSSPLICED} {Pfam: DNA polymerase alpha/epsilon subunit B [PF04042.18, score=133.4]; DNA polymerases epsilon N terminal [PF12213.10, score=33.0]} {Human: ENSG00000100479, POLE2, DNA polymerase epsilon 2, accessory subunit, [RH, Score=344, Expect=9e-112]} {Mouse: ENSMUSG00000020974, Pole2, polymerase (DNA directed), epsilon 2 (p59 subunit), [RH, Score=339, Expect=7e-110]} {Dmel: FBgn0035644, DNApol-epsilon58, DNA polymerase epsilon 58kD subunit, [RH, Score=266, Expect=5e-82]} {Celegans: WBGene00017237, pole-2, Probable DNA polymerase epsilon subunit 2, [RH, Score=209, Expect=1e-60]} {Smed: dd_Smed_v6_16802_0_1, dd_Smed_v6_16802_0_1, [RH, Score=238, Expect=2e-71]} {RNA1509_55428} {RNA1310_25376, RNA1509_55428} {RNA1509_55428, RNA815_30212} |
| 2. | MligTC455_17250 | 422 | 8.79 | Mlig455_002372 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.866/0.00025 |
GNAI1 | 1.728 | - | - | - | 0.965 | - | 0.763 | Mlig455_002372 {REF} {Length: 3277} {Pfam: G-protein alpha subunit [PF00503.22, score=411.7]; ADP-ribosylation factor family [PF00025.23, score=60.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=22.2]} {Human: ENSG00000127955, GNAI1, G protein subunit alpha i1, [RH, Score=545, Expect=0.0]; ENSG00000114353, GNAI2, G protein subunit alpha i2, [RH, Score=539, Expect=0.0]; ENSG00000065135, GNAI3, G protein subunit alpha i3, [RH, Score=536, Expect=0.0]} {Mouse: ENSMUSG00000057614, Gnai1, guanine nucleotide binding protein (G protein), alpha inhibiting 1, [RH, Score=545, Expect=0.0]; ENSMUSG00000000001, Gnai3, guanine nucleotide binding protein (G protein), alpha inhibiting 3, [RH, Score=536, Expect=0.0]; ENSMUSG00000032562, Gnai2, guanine nucleotide binding protein (G protein), alpha inhibiting 2, [RH, Score=536, Expect=0.0]} {Dmel: FBgn0001104, Galphai, G protein alpha i subunit, [RH, Score=513, Expect=0.0]} {Celegans: WBGene00001678, gpa-16, Guanine nucleotide-binding protein alpha-16 subunit, [RH, Score=460, Expect=5e-163]} {Smed: dd_Smed_v6_5082_0_2, dd_Smed_v6_5082_0_2, [RH, Score=440, Expect=2e-155]} {RNA1509_28648, RNA1509_5180} {RNA1310_16162, RNA1509_28648, RNA1509_5180} {RNA1509_28648, RNA1509_5180, RNA815_5988} |
| 3. | MligTC455_20452 | 725 | 15.1 | Mlig455_068384, Mlig455_068393 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.348 Region-specific R5: 3.269 Region-enriched R5: 2.907/0.00000 |
1.724 | - | - | - | 0.955 | - | 0.769 | Mlig455_068384 {REF} {Length: 3173} {RNA1509_25509} {RNA1310_31646} {RNA815_14776.1} Mlig455_068393 {REF} {Length: 1739} {TRANSSPLICED} {RNA1509_25509, RNA1509_60017} {RNA1310_31646, RNA1509_25509, RNA1509_60017} {RNA1509_25509, RNA1509_60017, RNA815_14776.1} |
|
| 4. | MligTC455_52613 | 203 | 4.22 | Mlig455_008194 | Neo: - Age: - Region-enriched R5: 3.365/0.00130 |
1.72 | 0.746 | - | - | 0.974 | - | - | Mlig455_008194 {REF} {Length: 1747} {RNA1310_19519} {RNA815_58115} | |
| 5. | MligTC455_13555 | 95 | 1.97 | Mlig455_019079 | Neo: Int S/G2/M Age: - |
COA7 | 1.672 | - | - | - | 0.954 | - | 0.718 | Mlig455_019079 {REF} {Length: 1418} {Pfam: Sel1 repeat [PF08238.14, score=23.3]} {Human: ENSG00000162377, COA7, cytochrome c oxidase assembly factor 7 (putative), [Score=48.9, Expect=2e-06]} {Mouse: ENSMUSG00000048351, Coa7, cytochrome c oxidase assembly factor 7, [Score=46.6, Expect=1e-05]} {Dmel: FBgn0039965, CG13865, [RH, Score=66.2, Expect=2e-12]} {RNA1509_45906} {RNA1310_37650.1} {RNA815_47606} |
| 6. | MligTC455_33898 | 1538 | 32.04 | Mlig455_033531, Mlig455_069205 | Neo: - Age: - Region-enriched R5: 1.399/0.00009 |
1.663 | - | - | - | 0.956 | - | 0.707 | Mlig455_033531 {REF} {Length: 2226} {NoTransDecoderORF} {RNA1509_16348, RNA1509_26211} {RNA1310_24423, RNA1509_16348} {RNA1509_16348, RNA815_2901.1} Mlig455_069205 {REF} {Length: 2053} {NoTransDecoderORF} {RNA1509_26211} {RNA1310_24423} {RNA815_5281} |
|
| 7. | MligTC455_44906 | 530 | 11.05 | Mlig455_007278, Mlig455_007296, Mlig455_031831 | Neo: - Age: - Region-enriched R3: 2.840/0.00511 |
GLIPR2 | 0.976 | - | - | - | 0.976 | - | - | Mlig455_007278 {REF} {Length: 2338} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=102.7]} {Human: ENSG00000122694, GLIPR2, GLI pathogenesis related 2, [Score=97.8, Expect=2e-23]} {Mouse: ENSMUSG00000028480, Glipr2, GLI pathogenesis-related 2, [Score=100, Expect=1e-24]} {Dmel: FBgn0054049, CG34049, [Score=101, Expect=9e-24]} {Celegans: WBGene00007398, C07A4.3, [Score=68.2, Expect=4e-13]} {Smed: dd_Smed_v6_2081_0_1, dd_Smed_v6_2081_0_1, [Score=145, Expect=4e-39]} {RNA1509_31104} {RNA1310_10783} {RNA815_20378} Mlig455_007296 {REF} {Length: 2231} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=104.8]} {Human: ENSG00000122694, GLIPR2, GLI pathogenesis related 2, [Score=102, Expect=3e-25]} {Mouse: ENSMUSG00000028480, Glipr2, GLI pathogenesis-related 2, [Score=105, Expect=2e-26]} {Dmel: FBgn0054049, CG34049, [Score=97.1, Expect=4e-22]} {Celegans: WBGene00007398, C07A4.3, [Score=72.8, Expect=1e-14]} {Smed: dd_Smed_v6_2081_0_1, dd_Smed_v6_2081_0_1, [Score=144, Expect=8e-39]} {RNA1509_31104, RNA1509_45698, RNA1509_49245} {RNA1310_10783, RNA1509_45698, RNA1509_49245} {RNA1509_45698, RNA1509_49245, RNA815_20378} Mlig455_031831 {REF} {Length: 1609} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=51.1]} {Human: ENSG00000122694, GLIPR2, GLI pathogenesis related 2, [Score=85.5, Expect=1e-19]} {Mouse: ENSMUSG00000028480, Glipr2, GLI pathogenesis-related 2, [Score=81.3, Expect=3e-18]} {Dmel: FBgn0054049, CG34049, [Score=87.8, Expect=1e-19]} {Celegans: WBGene00007398, C07A4.3, [Score=67.8, Expect=3e-13]} {Smed: dd_Smed_v6_2081_0_1, dd_Smed_v6_2081_0_1, [Score=120, Expect=3e-31]} {RNA1509_31104} {RNA1310_10783} {RNA815_20378} |
| 8. | MligTC455_53177 | 99 | 2.05 | Mlig455_046372 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-2.065 Region-enriched R5: 3.084/0.00768 |
GRM4 | 0.968 | - | - | - | 0.968 | - | - | Mlig455_046372 {REF} {Length: 3290} {Pfam: Receptor family ligand binding region [PF01094.30, score=126.2]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=97.5]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=38.0]; Periplasmic binding protein [PF13458.8, score=23.0]} {Human: ENSG00000124493, GRM4, glutamate metabotropic receptor 4, [Score=194, Expect=1e-50]; ENSG00000164082, GRM2, glutamate metabotropic receptor 2, [Score=189, Expect=3e-49]; ENSG00000196277, GRM7, glutamate metabotropic receptor 7, [Score=188, Expect=9e-49]} {Mouse: ENSMUSG00000063239, Grm4, glutamate receptor, metabotropic 4, [Score=197, Expect=7e-52]} {Dmel: FBgn0050361, mtt, mangetout, [Score=189, Expect=3e-49]} {Celegans: WBGene00003233, mgl-2, Metabotropic GLutamate receptor family, [Score=179, Expect=3e-46]} {Smed: dd_Smed_v6_15419_0_1, dd_Smed_v6_15419_0_1, [Score=209, Expect=5e-56]} {RNA1509_48023} {RNA1310_80724} {RNA815_19863} |
| 9. | MligTC455_14557 | 359 | 7.49 | Mlig455_036538 | Neo: - Age: Down-Up-Down |
ETFRF1 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_036538 {REF} {Length: 1476} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=40.9]; Complex1_LYR-like [PF13233.8, score=27.6]} {Human: ENSG00000205707, ETFRF1, electron transfer flavoprotein regulatory factor 1, [RH, Score=98.2, Expect=1e-27]} {Mouse: ENSMUSG00000040370, Etfrf1, electron transfer flavoprotein regulatory factor 1, [RH, Score=119, Expect=5e-36]} {Dmel: FBgn0040985, CG6115, [RH, Score=75.5, Expect=4e-19]} {Celegans: WBGene00012780, Y42A5A.5, [RH, Score=115, Expect=8e-35]} {RNA1509_31931} {RNA1310_65323} {RNA815_18968.1} |
| 10. | MligTC455_43362 | 93 | 1.95 | Mlig455_002148 | Neo: - Age: - |
0.962 | - | - | - | - | - | 0.962 | Mlig455_002148 {REF} {Length: 2843} {TRANSSPLICED} {Smed: dd_Smed_v6_9636_0_1, dd_Smed_v6_9636_0_1, [RH, Score=127, Expect=1e-30]} {RNA1509_37248} {RNA1310_12152.1} {RNA815_8090} | |
| 11. | MligTC455_50709 | 293 | 6.1 | Mlig455_059022 | Neo: Int S/G2/M Age: - |
RBM42 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_059022 {REF} {Length: 1686} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=68.8]} {Human: ENSG00000126254, RBM42, RNA binding motif protein 42, [RH, Score=191, Expect=2e-57]} {Mouse: ENSMUSG00000036733, Rbm42, RNA binding motif protein 42, [RH, Score=192, Expect=2e-57]} {Dmel: FBgn0037342, CG2931, [Score=182, Expect=8e-56]} {Celegans: WBGene00021901, tag-262, [RH, Score=210, Expect=2e-66]} {Smed: dd_Smed_v6_9591_0_1, dd_Smed_v6_9591_0_1, [RH, Score=147, Expect=9e-43]} {RNA1509_39624, RNA1509_49775} {RNA1310_42297, RNA1509_39624, RNA1509_49775} {RNA1509_39624, RNA1509_49775, RNA815_21133} |
| 12. | MligTC455_26644 | 435 | 9.06 | Mlig455_045228 | Neo: - Age: - |
TUBGCP2 | 0.959 | 0.959 | - | - | - | - | - | Mlig455_045228 {REF} {Length: 2842} {Pfam: Gamma tubulin complex component C-terminal [PF04130.15, score=239.2]; Gamma tubulin complex component N-terminal [PF17681.3, score=207.5]} {Human: ENSG00000130640, TUBGCP2, tubulin gamma complex associated protein 2, [RH, Score=574, Expect=0.0]} {Mouse: ENSMUSG00000025474, Tubgcp2, tubulin, gamma complex associated protein 2, [RH, Score=565, Expect=0.0]} {Dmel: FBgn0026430, Grip84, Gamma-tubulin ring protein 84, [RH, Score=346, Expect=1e-105]} {Smed: dd_Smed_v6_7469_0_1, dd_Smed_v6_7469_0_1, [RH, Score=365, Expect=6e-114]} {RNA1509_10994} {RNA1310_6326, RNA1509_10994} {RNA1509_10994, RNA815_15698.1} |
| 13. | MligTC455_27962 | 528 | 11 | Mlig455_033837 | Neo: Irradiation Age: Up-Down-Down |
MYO18A | 0.959 | - | - | - | - | - | 0.959 | Mlig455_033837 {REF} {Length: 7232} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=303.8]; PDZ domain [PF17820.3, score=26.5]; PDZ domain [PF00595.26, score=25.5]; Myosin tail [PF01576.21, score=20.3]} {Human: ENSG00000196535, MYO18A, myosin XVIIIA, [RH, Score=877, Expect=0.0]} {Mouse: ENSMUSG00000000631, Myo18a, myosin XVIIIA, [RH, Score=873, Expect=0.0]} {Dmel: FBgn0026059, Mhcl, Myosin heavy chain-like, [RH, Score=881, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [Score=365, Expect=5e-102]} {Smed: dd_Smed_v6_6277_0_1, dd_Smed_v6_6277_0_1, [RH, Score=796, Expect=0.0]} {RNA1509_2680} {RNA1310_390} {RNA815_386} |
| 14. | MligTC455_42040 | 180 | 3.76 | Mlig455_014679 | Neo: - Age: - Region-enriched R5: 2.283/0.03075 |
PRKX | 0.959 | - | - | - | - | - | 0.959 | Mlig455_014679 {REF} {Length: 2533} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=230.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=121.5]; Kinase-like [PF14531.8, score=33.0]} {Human: ENSG00000183943, PRKX, protein kinase X-linked, [RH, Score=405, Expect=3e-141]} {Mouse: ENSMUSG00000035725, Prkx, protein kinase, X-linked, [RH, Score=406, Expect=8e-142]} {Dmel: FBgn0000489, Pka-C3, Protein kinase, cAMP-dependent, catalytic subunit 3, [RH, Score=421, Expect=3e-144]} {Celegans: WBGene00018569, F47F2.1, cAMP-dependent protein kinase, catalytic subunit-like, [RH, Score=341, Expect=1e-115]} {Smed: dd_Smed_v6_3838_0_1, dd_Smed_v6_3838_0_1, [RH, Score=491, Expect=8e-176]} {RNA1509_34757, RNA1509_48852} {RNA1310_25898, RNA1509_34757, RNA1509_48852} {RNA1509_34757, RNA1509_48852, RNA815_5443.2} |
| 15. | MligTC455_29381 | 347 | 7.22 | Mlig455_005234, Mlig455_044030, Mlig455_068074 | Neo: - Age: logFC(26M/2M)=0.666 |
0.958 | - | - | - | 0.958 | - | - | Mlig455_005234 {REF} {Length: 1977} {RNA1509_38155} {RNA1310_16376} {RNA815_12881} Mlig455_044030 {REF} {Length: 7197} {RNA1509_34218} {RNA1310_18727} {RNA815_16176.1} Mlig455_068074 {REF} {Length: 1624} {RNA1509_38155} {RNA1310_16376} {RNA815_12881} |
|
| 16. | MligTC455_39530 | 199 | 4.16 | Mlig455_049215 | Neo: Irradiation Age: - |
POLA2 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_049215 {REF} {Length: 2336} {TRANSSPLICED} {Pfam: DNA polymerase alpha/epsilon subunit B [PF04042.18, score=33.7]} {Human: ENSG00000014138, POLA2, DNA polymerase alpha 2, accessory subunit, [RH, Score=91.7, Expect=6e-19]} {Mouse: ENSMUSG00000024833, Pola2, polymerase (DNA directed), alpha 2, [RH, Score=97.1, Expect=9e-21]} {Dmel: FBgn0005696, DNApol-alpha73, DNA polymerase alpha 73kD, [RH, Score=77.0, Expect=1e-14]} {Celegans: WBGene00001002, div-1, DNA polymerase alpha subunit B, [RH, Score=72.0, Expect=5e-13]} {RNA1509_57677} {RNA1310_19582, RNA1509_57677} {RNA1509_57677, RNA815_35374} |
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