Data search
Results for MligTC455_27962
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27962 | 528 | 11.00 | Mlig455_033837 | Neo: Irradiation Age: Up-Down-Down |
MYO18A | Mlig455_033837 {REF} {Length: 7232} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=303.8]; PDZ domain [PF17820.3, score=26.5]; PDZ domain [PF00595.26, score=25.5]; Myosin tail [PF01576.21, score=20.3]} {Human: ENSG00000196535, MYO18A, myosin XVIIIA, [RH, Score=877, Expect=0.0]} {Mouse: ENSMUSG00000000631, Myo18a, myosin XVIIIA, [RH, Score=873, Expect=0.0]} {Dmel: FBgn0026059, Mhcl, Myosin heavy chain-like, [RH, Score=881, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [Score=365, Expect=5e-102]} {Smed: dd_Smed_v6_6277_0_1, dd_Smed_v6_6277_0_1, [RH, Score=796, Expect=0.0]} {RNA1509_2680} {RNA1310_390} {RNA815_386} |
Cumulative graph for MligTC455_27962
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.495 | 3.856 | 0.60985 | 1.00000 | |
| RegionR2 | 0.208 | 3.856 | 0.68794 | 1.00000 | |
| RegionR3 | -0.215 | 3.856 | 0.59845 | 1.00000 | |
| RegionR4 | 0.584 | 3.856 | 0.20768 | 0.49100 | |
| RegionR5 | -0.408 | 3.856 | 0.26174 | 0.58319 | |
| RegionR6 | 0.05 | 3.856 | 0.90203 | 1.00000 | |
| RegionR7 | -0.962 | 3.856 | 0.10442 | 0.61508 | |
| RegionR8 | 0.248 | 3.856 | 0.68433 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.152 | 3.856 | 0.07020 | 0.75209 | |
| RegenerationR2 | 0.064 | 3.856 | 0.88121 | 1.00000 | |
| RegenerationR3 | -0.1 | 3.856 | 0.83789 | 0.99330 | |
| RegenerationR4 | -0.661 | 3.856 | 0.17232 | 0.60954 | |
| RegenerationR5 | 0.007 | 3.856 | 0.98660 | 1.00000 | |
| RegenerationR6 | -0.605 | 3.856 | 0.22889 | 0.57455 | |
| RegenerationBL | 0.322 | 3.856 | 0.58392 | 0.93533 | |
| RegenerationTP | -0.998 | 3.856 | 0.18201 | 0.61771 |
Genes with expression patterns similar to MligTC455_27962
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27962 | 528 | 11 | Mlig455_033837 | Neo: Irradiation Age: Up-Down-Down |
MYO18A | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_033837 {REF} {Length: 7232} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=303.8]; PDZ domain [PF17820.3, score=26.5]; PDZ domain [PF00595.26, score=25.5]; Myosin tail [PF01576.21, score=20.3]} {Human: ENSG00000196535, MYO18A, myosin XVIIIA, [RH, Score=877, Expect=0.0]} {Mouse: ENSMUSG00000000631, Myo18a, myosin XVIIIA, [RH, Score=873, Expect=0.0]} {Dmel: FBgn0026059, Mhcl, Myosin heavy chain-like, [RH, Score=881, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [Score=365, Expect=5e-102]} {Smed: dd_Smed_v6_6277_0_1, dd_Smed_v6_6277_0_1, [RH, Score=796, Expect=0.0]} {RNA1509_2680} {RNA1310_390} {RNA815_386} |
| 2. | MligTC455_09060 | 276 | 5.75 | Mlig455_009276 | Neo: - Age: - Region-enriched R5: 1.044/0.04246 |
ERCC3 | 0.972 | - | - | - | - | 0.972 | - | Mlig455_009276 {REF} {Length: 4027} {TRANSSPLICED} {Pfam: ERCC3/RAD25/XPB C-terminal helicase [PF16203.7, score=389.1]; Helicase conserved C-terminal domain [PF13625.8, score=116.7]; Type III restriction enzyme, res subunit [PF04851.17, score=62.2]; Helicase conserved C-terminal domain [PF00271.33, score=39.5]; SNF2-related domain [PF00176.25, score=25.2]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=19.2]} {Human: ENSG00000163161, ERCC3, ERCC excision repair 3, TFIIH core complex helicase subunit, [RH, Score=1009, Expect=0.0]} {Mouse: ENSMUSG00000024382, Ercc3, excision repair cross-complementing rodent repair deficiency, complementation group 3, [RH, Score=1018, Expect=0.0]} {Dmel: FBgn0001179, hay, haywire, [RH, Score=994, Expect=0.0]} {Celegans: WBGene00013441, xpb-1, XPB (Xeroderma Pigmentosum complementation group B) related, [RH, Score=930, Expect=0.0]} {Smed: dd_Smed_v6_9996_0_1, dd_Smed_v6_9996_0_1, [RH, Score=764, Expect=0.0]} {RNA1509_12216} {RNA1310_7003} {RNA815_3026.1} |
| 3. | MligTC455_44014 | 525 | 10.94 | Mlig455_055228 | Neo: Int S/G2/M Age: Down-Up-Up |
U2SURP | 0.97 | - | - | - | - | - | 0.970 | Mlig455_055228 {REF} {Length: 2648} {TRANSSPLICED} {Pfam: Surp module [PF01805.22, score=51.3]; CID domain [PF04818.15, score=46.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=45.7]; RNA recognition motif [PF16367.7, score=20.9]} {Human: ENSG00000163714, U2SURP, U2 snRNP associated SURP domain containing, [RH, Score=407, Expect=2e-127]} {Mouse: ENSMUSG00000032407, U2surp, U2 snRNP-associated SURP domain containing, [RH, Score=409, Expect=4e-128]} {Dmel: FBgn0034572, CG9346, [RH, Score=379, Expect=9e-118]} {Celegans: WBGene00015581, C07H6.4, [RH, Score=315, Expect=4e-94]} {Smed: dd_Smed_v6_3029_0_1, dd_Smed_v6_3029_0_1, [RH, Score=476, Expect=2e-155]} {RNA1509_14951} {RNA1310_6191, RNA1509_14951} {RNA1509_14951, RNA815_1206.1} |
| 4. | MligTC455_41725 | 639 | 13.32 | Mlig455_033855 | Neo: - Age: Down-Up-Up |
0.965 | - | - | - | - | - | 0.965 | Mlig455_033855 {REF} {Length: 878} {RNA1509_20205} {RNA1310_47920, RNA1509_20205} {RNA1509_20205, RNA815_23723.1} | |
| 5. | MligTC455_39344 | 227 | 4.73 | Mlig455_031617 | Neo: Int S/G2/M Age: - |
POLE2 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_031617 {REF} {Length: 2834} {TRANSSPLICED} {Pfam: DNA polymerase alpha/epsilon subunit B [PF04042.18, score=133.4]; DNA polymerases epsilon N terminal [PF12213.10, score=33.0]} {Human: ENSG00000100479, POLE2, DNA polymerase epsilon 2, accessory subunit, [RH, Score=344, Expect=9e-112]} {Mouse: ENSMUSG00000020974, Pole2, polymerase (DNA directed), epsilon 2 (p59 subunit), [RH, Score=339, Expect=7e-110]} {Dmel: FBgn0035644, DNApol-epsilon58, DNA polymerase epsilon 58kD subunit, [RH, Score=266, Expect=5e-82]} {Celegans: WBGene00017237, pole-2, Probable DNA polymerase epsilon subunit 2, [RH, Score=209, Expect=1e-60]} {Smed: dd_Smed_v6_16802_0_1, dd_Smed_v6_16802_0_1, [RH, Score=238, Expect=2e-71]} {RNA1509_55428} {RNA1310_25376, RNA1509_55428} {RNA1509_55428, RNA815_30212} |
| 6. | MligTC455_27440 | 207 | 4.31 | Mlig455_050456 | Neo: - Age: - |
DCDC1 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_050456 {REF} {Length: 5764} {Pfam: Cep120 protein [PF12416.10, score=40.9]} {Human: ENSG00000170959, DCDC1, doublecortin domain containing 1, [Score=90.1, Expect=9e-18]} {Smed: dd_Smed_v6_11770_0_1, dd_Smed_v6_11770_0_1, [Score=57.8, Expect=3e-08]} {RNA1509_9003} {RNA1310_581.1} {RNA815_1282} |
| 7. | MligTC455_48801 | 537 | 11.18 | Mlig455_054489 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=0.685 Region-enriched R5: 1.314/0.00537 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_054489 {REF} {Length: 1148} {TRANSSPLICED} {Pfam: Uncharacterised ACR, YagE family COG1723 [PF02582.16, score=105.1]} {Dmel: FBgn0030678, CG11679, [RH, Score=136, Expect=1e-36]} {Celegans: WBGene00014176, ZK1010.2, [RH, Score=109, Expect=6e-27]} {Smed: dd_Smed_v6_8446_0_2, dd_Smed_v6_8446_0_2, [RH, Score=95.9, Expect=2e-22]} {RNA1509_19052} {RNA1310_16765} {RNA815_13720} | |
| 8. | MligTC455_16583 | 1882 | 39.21 | Mlig455_035277 | Neo: - Age: - |
TTC26 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_035277 {REF} {Length: 2402} {Pfam: Tetratricopeptide repeat [PF14559.8, score=65.1]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=50.0]; Tetratricopeptide repeat [PF07719.19, score=36.6]; Tetratricopeptide repeat [PF13371.8, score=34.4]; Tetratricopeptide repeat [PF13428.8, score=34.3]; Tetratricopeptide repeat [PF00515.30, score=25.1]; Tetratricopeptide repeat [PF13174.8, score=24.7]; Tetratricopeptide repeat [PF13181.8, score=24.7]; Tetratricopeptide repeat [PF13176.8, score=21.5]} {Human: ENSG00000105948, TTC26, tetratricopeptide repeat domain 26, [RH, Score=871, Expect=0.0]} {Mouse: ENSMUSG00000056832, Ttc26, tetratricopeptide repeat domain 26, [RH, Score=878, Expect=0.0]} {Dmel: FBgn0038358, CG4525, [RH, Score=577, Expect=0.0]} {Celegans: WBGene00001129, dyf-13, Intraflagellar transport protein 56 homolog, [RH, Score=399, Expect=1e-131]} {Smed: dd_Smed_v6_12618_0_1, dd_Smed_v6_12618_0_1, [RH, Score=868, Expect=0.0]} {RNA1509_27276, RNA1509_35708, RNA1509_3925} {RNA1310_10479, RNA1509_27276, RNA1509_35708, RNA1509_3925} {RNA1509_27276, RNA1509_35708, RNA1509_3925, RNA815_3824} |
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