Data search
Results for MligTC455_39470
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39470 | 79 | 1.65 | Mlig455_036326 | Neo: - Age: logFC(26M/2M)=0.280 |
RBM14 | Mlig455_036326 {REF} {Length: 3821} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=40.2]} {Human: ENSG00000239306, RBM14, RNA binding motif protein 14, [RH, Score=69.7, Expect=3e-12]} {Mouse: ENSMUSG00000006456, Rbm14, RNA binding motif protein 14, [RH, Score=70.1, Expect=2e-12]} {Dmel: FBgn0039730, CG7903, [RH, Score=60.1, Expect=1e-09]} {Celegans: WBGene00004384, rnp-1, RNA-binding protein rnp-1, [RH, Score=53.5, Expect=1e-07]} {RNA1509_2640} {RNA1310_12503.1} {RNA815_10453.1} |
Cumulative graph for MligTC455_39470
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 5.02 | 1.826 | 0.03652 | 0.47198 | |
| RegionR2 | -0.871 | 1.826 | 0.97880 | 1.00000 | |
| RegionR3 | -0.678 | 1.826 | 0.96325 | 1.00000 | |
| RegionR4 | 2.384 | 1.826 | 0.03656 | 0.15601 | |
| RegionR5 | -0.263 | 1.826 | 0.89226 | 1.00000 | |
| RegionR6 | -1.022 | 1.826 | 0.98492 | 1.00000 | |
| RegionR7 | 0.442 | 1.826 | 0.67218 | 1.00000 | |
| RegionR8 | -5.013 | 1.826 | 0.11320 | 0.62259 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.392 | 1.826 | 0.12896 | 0.86144 | |
| RegenerationR2 | 0.546 | 1.826 | 0.47251 | 0.85874 | |
| RegenerationR3 | 0.25 | 1.826 | 0.80523 | 0.98366 | |
| RegenerationR4 | -0.6 | 1.826 | 0.48040 | 0.85867 | |
| RegenerationR5 | 0.62 | 1.826 | 0.42929 | 0.81743 | |
| RegenerationR6 | 1.864 | 1.826 | 0.03580 | 0.23695 | |
| RegenerationBL | 1.804 | 1.826 | 0.31865 | 0.68574 | |
| RegenerationTP | 0.082 | 1.826 | 0.79467 | 1.00000 |
Genes with expression patterns similar to MligTC455_39470
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39470 | 79 | 1.65 | Mlig455_036326 | Neo: - Age: logFC(26M/2M)=0.280 |
RBM14 | 5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_036326 {REF} {Length: 3821} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=40.2]} {Human: ENSG00000239306, RBM14, RNA binding motif protein 14, [RH, Score=69.7, Expect=3e-12]} {Mouse: ENSMUSG00000006456, Rbm14, RNA binding motif protein 14, [RH, Score=70.1, Expect=2e-12]} {Dmel: FBgn0039730, CG7903, [RH, Score=60.1, Expect=1e-09]} {Celegans: WBGene00004384, rnp-1, RNA-binding protein rnp-1, [RH, Score=53.5, Expect=1e-07]} {RNA1509_2640} {RNA1310_12503.1} {RNA815_10453.1} |
| 2. | MligTC455_44946 | 83 | 1.73 | Mlig455_046261, Mlig455_066038 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 5.905/0.02618 |
POLQ, PRR9 | 2.694 | - | - | - | 0.806 | 0.924 | 0.964 | Mlig455_046261 {REF} {Length: 9223} {TRANSSPLICED} {Pfam: DNA polymerase family A [PF00476.22, score=307.8]; Helicase conserved C-terminal domain [PF00271.33, score=41.2]; DEAD/DEAH box helicase [PF00270.31, score=22.4]} {Human: ENSG00000051341, POLQ, DNA polymerase theta, [RH, Score=610, Expect=5e-178]} {Mouse: ENSMUSG00000034206, Polq, polymerase (DNA directed), theta, [RH, Score=613, Expect=2e-179]} {Dmel: FBgn0002905, mus308, mutagen-sensitive 308, [RH, Score=575, Expect=7e-169]} {Celegans: WBGene00020964, polq-1, DNA polymerase theta, [RH, Score=308, Expect=3e-84]} {Smed: dd_Smed_v6_51730_0_3, dd_Smed_v6_51730_0_3, [RH, Score=253, Expect=8e-76]} {RNA1509_38802} {RNA1310_1092} {RNA815_20127} Mlig455_066038 {REF} {Length: 1082} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=42.4, Expect=1e-05]} {RNA1310_62396} |
| 3. | MligTC455_33926 | 263 | 5.47 | Mlig455_048965 | Neo: - Age: Down-Down-Up |
PPIL2 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_048965 {REF} {Length: 2574} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=170.4]; Rtf2 RING-finger [PF04641.14, score=25.1]} {Human: ENSG00000100023, PPIL2, peptidylprolyl isomerase like 2, [RH, Score=503, Expect=5e-174]} {Mouse: ENSMUSG00000022771, Ppil2, peptidylprolyl isomerase (cyclophilin)-like 2, [RH, Score=492, Expect=3e-170]} {Dmel: FBgn0034109, CG7747, [RH, Score=511, Expect=7e-178]} {Celegans: WBGene00000880, cyn-4, Peptidyl-prolyl cis-trans isomerase 4, [RH, Score=439, Expect=2e-149]} {Smed: dd_Smed_v6_4217_0_1, dd_Smed_v6_4217_0_1, [RH, Score=452, Expect=2e-154]} {RNA1509_9537} {RNA1310_15337, RNA1509_9537} {RNA1509_9537, RNA815_4990} |
| 4. | MligTC455_30283 | 243 | 5.06 | Mlig455_050829 | Neo: - Age: - |
0.953 | - | 0.953 | - | - | - | - | Mlig455_050829 {REF} {Length: 1893} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_58903} {RNA815_47584} | |
| 5. | MligTC455_47454 | 117 | 2.43 | Mlig455_064549 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_064549 {REF} {Length: 455} {NoTransDecoderORF} {RNA1310_142186} | |
| 6. | MligTC455_26656 | 215 | 4.48 | Mlig455_067721 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_067721 {REF} {Length: 3295} {Pfam: Domain of unknown function (DUF1868) [PF08975.12, score=30.6]} {RNA1509_48474} {RNA1310_38237, RNA1509_48474} {RNA1509_48474, RNA815_31773} |
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