Data search
Results for MligTC455_39471
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39471 | 1028 | 21.42 | Mlig455_036327 | Neo: - Age: - |
Mlig455_036327 {REF} {Length: 1382} {RNA1509_44762} {RNA1310_27397} {RNA815_34470} |
Cumulative graph for MligTC455_39471
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.648 | 4.685 | 0.42194 | 1.00000 | |
| RegionR2 | -0.305 | 4.685 | 0.39007 | 0.78498 | |
| RegionR3 | 0.234 | 4.685 | 0.38911 | 0.91980 | |
| RegionR4 | 0.665 | 4.685 | 0.05772 | 0.21228 | |
| RegionR5 | 0.131 | 4.685 | 0.59906 | 0.95679 | |
| RegionR6 | -0.411 | 4.685 | 0.15602 | 0.70450 | |
| RegionR7 | -0.626 | 4.685 | 0.10696 | 0.62139 | |
| RegionR8 | -0.335 | 4.685 | 0.44487 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.64 | 4.685 | 0.60291 | 1.00000 | |
| RegenerationR2 | -0.581 | 4.685 | 0.06697 | 0.42238 | |
| RegenerationR3 | -0.477 | 4.685 | 0.14522 | 0.57248 | |
| RegenerationR4 | -0.639 | 4.685 | 0.06335 | 0.40230 | |
| RegenerationR5 | -0.151 | 4.685 | 0.61876 | 0.91814 | |
| RegenerationR6 | 0.622 | 4.685 | 0.06797 | 0.32676 | |
| RegenerationBL | 0.303 | 4.685 | 0.49020 | 0.85516 | |
| RegenerationTP | -0.142 | 4.685 | 0.75698 | 1.00000 |
Genes with expression patterns similar to MligTC455_39471
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39471 | 1028 | 21.42 | Mlig455_036327 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_036327 {REF} {Length: 1382} {RNA1509_44762} {RNA1310_27397} {RNA815_34470} | |
| 2. | MligTC455_49148 | 2777 | 57.85 | Mlig455_041348 | Neo: Int S/G2/M Age: Down-Up-Down |
PSMC3 | 1.747 | - | - | - | 0.965 | - | 0.782 | Mlig455_041348 {REF} {Length: 2082} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.8]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=53.6]; AAA+ lid domain [PF17862.3, score=42.0]; AAA ATPase domain [PF13191.8, score=27.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=25.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=23.1]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.0]; AAA domain [PF13401.8, score=20.5]; Protein of unknown function (DUF815) [PF05673.15, score=18.4]} {Human: ENSG00000165916, PSMC3, proteasome 26S subunit, ATPase 3, [RH, Score=739, Expect=0.0]} {Mouse: ENSMUSG00000002102, Psmc3, proteasome (prosome, macropain) 26S subunit, ATPase 3, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0028684, Rpt5, Regulatory particle triple-A ATPase 5, [RH, Score=728, Expect=0.0]} {Celegans: WBGene00004505, rpt-5, Proteasome Regulatory Particle, ATPase-like, [RH, Score=704, Expect=0.0]} {Smed: dd_Smed_v6_1855_0_1, dd_Smed_v6_1855_0_1, [RH, Score=735, Expect=0.0]} {RNA1509_14202, RNA1509_1694} {RNA1310_12255, RNA1509_14202, RNA1509_1694} {RNA1509_14202, RNA1509_1694, RNA815_4834.1} |
| 3. | MligTC455_19458 | 1300 | 27.09 | Mlig455_007643 | Neo: - Age: logFC(26M/2M)=0.891 |
ATP6AP2 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_007643 {REF} {Length: 3965} {Pfam: Renin receptor-like protein [PF07850.16, score=80.6]} {Human: ENSG00000182220, ATP6AP2, ATPase H+ transporting accessory protein 2, [RH, Score=73.2, Expect=3e-14]} {Mouse: ENSMUSG00000031007, Atp6ap2, ATPase, H+ transporting, lysosomal accessory protein 2, [RH, Score=73.6, Expect=3e-14]} {Dmel: FBgn0037671, VhaM8.9, Vacuolar H[+] ATPase M8.9 accessory subunit, [RH, Score=67.0, Expect=3e-12]} {Celegans: WBGene00010993, vha-20, Vacuolar H ATPase, [RH, Score=56.2, Expect=1e-08]} {Smed: dd_Smed_v6_1067_0_1, dd_Smed_v6_1067_0_1, [RH, Score=77.8, Expect=2e-18]} {RNA1509_44098} {RNA1310_8954} {RNA815_3484.1} |
| 4. | MligTC455_53552 | 1646 | 34.28 | Mlig455_064645 | Neo: Int S/G2/M Age: - |
TMCO1 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_064645 {REF} {Length: 1269} {TRANSSPLICED} {Pfam: Integral membrane protein EMC3/TMCO1-like [PF01956.18, score=134.7]; CHD5-like protein [PF04420.16, score=19.3]} {Human: ENSG00000143183, TMCO1, transmembrane and coiled-coil domains 1, [RH, Score=225, Expect=3e-75]} {Mouse: ENSMUSG00000052428, Tmco1, transmembrane and coiled-coil domains 1, [RH, Score=225, Expect=2e-75]} {Dmel: FBgn0032746, CG10470, [RH, Score=254, Expect=3e-87]} {Celegans: WBGene00009045, F22B5.10, Calcium load-activated calcium channel homolog, [RH, Score=214, Expect=2e-71]} {Smed: dd_Smed_v6_2854_0_1, dd_Smed_v6_2854_0_1, [RH, Score=280, Expect=2e-97]} {RNA1509_11030, RNA1509_29706, RNA1509_5051} {RNA1310_868, RNA1509_11030, RNA1509_29706, RNA1509_5051} {RNA1509_11030, RNA1509_29706, RNA1509_5051, RNA815_1694.1} |
| 5. | MligTC455_21306 | 102 | 2.12 | Mlig455_058462 | Neo: - Age: - |
EZH1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_058462 {REF} {Length: 3530} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=71.6]; CXC domain [PF18264.3, score=34.9]} {Human: ENSG00000108799, EZH1, enhancer of zeste 1 polycomb repressive complex 2 subunit, [RH, Score=401, Expect=1e-128]; ENSG00000106462, EZH2, enhancer of zeste 2 polycomb repressive complex 2 subunit, [RH, Score=395, Expect=6e-126]} {Mouse: ENSMUSG00000006920, Ezh1, enhancer of zeste 1 polycomb repressive complex 2 subunit, [RH, Score=401, Expect=1e-128]; ENSMUSG00000029687, Ezh2, enhancer of zeste 2 polycomb repressive complex 2 subunit, [RH, Score=396, Expect=8e-127]} {Dmel: FBgn0000629, E(z), Enhancer of zeste, [RH, Score=498, Expect=4e-166]} {Celegans: WBGene00003220, mes-2, Histone-lysine N-methyltransferase mes-2, [RH, Score=178, Expect=1e-46]} {Smed: dd_Smed_v6_7754_0_1, dd_Smed_v6_7754_0_1, [RH, Score=329, Expect=3e-101]} {RNA1509_24843} {RNA1310_7365, RNA1509_24843} {RNA1509_24843, RNA815_13114} |
Berezikov Lab - 2020-2021 © ERIBA