Data search


search
Exact
Search

Results for MligTC455_39525

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39525 26 0.54 Mlig455_046789

Neo: -

Age: -

Mlig455_046789 {REF} {Length: 670} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}

Cumulative graph for MligTC455_39525

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.286 0.997 0.99996 1.00000
RegionR2 -2.039 0.997 0.99982 1.00000
RegionR3 -0.639 0.997 0.99996 1.00000
RegionR4 1.6 0.997 0.99994 1.00000
RegionR5 -0.156 0.997 0.99997 1.00000
RegionR6 -0.972 0.997 0.99994 1.00000
RegionR7 -0.328 0.997 0.99999 1.00000
RegionR8 0.248 0.997 0.99996 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.565 0.997 0.99997 1.00000
RegenerationR2 3.517 0.997 0.01432 0.19580
RegenerationR3 2.891 0.997 0.15180 0.58114
RegenerationR4 1.047 0.997 0.29053 0.73446
RegenerationR5 1.733 0.997 0.20198 0.63416
RegenerationR6 3.438 0.997 0.09654 0.38659
RegenerationBL 3.279 0.997 0.13531 0.43827
RegenerationTP 3.736 0.997 0.21880 0.66218


Genes with expression patterns similar to MligTC455_39525

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39525 26 0.54 Mlig455_046789

Neo: -

Age: -

3 - - - 1.000 1.000 1.000 Mlig455_046789 {REF} {Length: 670} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
2. MligTC455_05885 516 10.76 Mlig455_011335

Neo: -

Age: logFC(26M/2M)=-0.395

MAP3K19 1.732 - - - 0.781 0.951 - Mlig455_011335 {REF} {Length: 6983} {Pfam: Protein kinase domain [PF00069.27, score=287.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=180.9]; Ankyrin repeats (many copies) [PF13637.8, score=56.3]; Ankyrin repeats (3 copies) [PF12796.9, score=55.0]; Apolipoprotein L [PF05461.13, score=39.2]; Ankyrin repeat [PF13606.8, score=37.3]; Ankyrin repeats (many copies) [PF13857.8, score=32.7]; Ankyrin repeat [PF00023.32, score=31.2]; Phosphotransferase enzyme family [PF01636.25, score=21.2]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=118, Expect=4e-27]; ENSG00000163482, STK36, serine/threonine kinase 36, [Score=114, Expect=6e-25]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=115, Expect=4e-26]; ENSMUSG00000033276, Stk36, serine/threonine kinase 36, [Score=113, Expect=1e-24]; ENSMUSG00000020389, Cdkl3, cyclin-dependent kinase-like 3, [Score=112, Expect=7e-25]} {Dmel: FBgn0014006, Ask1, Apoptotic signal-regulating kinase 1, [Score=104, Expect=4e-22]} {Celegans: WBGene00019801, aak-1, 5'-AMP-activated protein kinase catalytic subunit alpha-1, [Score=97.1, Expect=2e-20]} {Smed: dd_Smed_v6_10339_0_1, dd_Smed_v6_10339_0_1, [Score=108, Expect=1e-23]} {RNA1509_1087, RNA1509_13350, RNA1509_21157, RNA1509_56155, RNA1509_58761} {RNA1310_1574, RNA1509_13350, RNA1509_21157, RNA1509_56155, RNA1509_58761} {RNA1509_13350, RNA1509_21157, RNA1509_56155, RNA1509_58761, RNA815_525.1}
3. MligTC455_42483 23 0.48 Mlig455_058290

Neo: -

Age: -

0.968 - - - - - 0.968 Mlig455_058290 {REF} {Length: 1476} {NoTransDecoderORF} {RNA1509_25786} {RNA1310_64824} {RNA815_44462}
4. MligTC455_21793 16 0.33 Mlig455_062163

Neo: -

Age: -

0.961 - - - - - 0.961 Mlig455_062163 {REF} {Length: 647} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_104721} {RNA815_45877.1}
5. MligTC455_07393 66 1.37 Mlig455_006210

Neo: -

Age: -

0.958 - - - - - 0.958 Mlig455_006210 {REF} {Length: 804} {NoTransDecoderORF} {RNA1310_52033}
6. MligTC455_30599 62 1.29 Mlig455_035018, Mlig455_053448

Neo: -

Age: Up-Down-Up

CRHR1, LINC02210-CRHR1 0.95 - - - - - 0.950

Mlig455_035018 {REF} {Length: 707} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=19.9]} {Human: ENSG00000263715, LINC02210-CRHR1, LINC02210-CRHR1 readthrough, [Score=66.2, Expect=2e-13]; ENSG00000120088, CRHR1, corticotropin releasing hormone receptor 1, [Score=66.2, Expect=5e-13]; ENSG00000278232, CRHR1, corticotropin releasing hormone receptor 1, [Score=66.2, Expect=5e-13]; ENSG00000276191, CRHR1, corticotropin releasing hormone receptor 1, [Score=66.2, Expect=5e-13]} {Mouse: ENSMUSG00000018634, Crhr1, corticotropin releasing hormone receptor 1, [Score=65.5, Expect=8e-13]} {Dmel: FBgn0260753, Pdfr, Pigment-dispersing factor receptor, [Score=65.1, Expect=7e-13]} {Celegans: WBGene00015735, pdfr-1, Calcitonin receptor-like protein 1, [Score=60.1, Expect=3e-11]} {Smed: dd_Smed_v6_22246_0_1, dd_Smed_v6_22246_0_1, [Score=52.0, Expect=1e-08]} {RNA1310_81830}

Mlig455_053448 {REF} {Length: 4522} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=21.7]} {Human: ENSG00000120088, CRHR1, corticotropin releasing hormone receptor 1, [Score=67.4, Expect=4e-13]; ENSG00000263715, LINC02210-CRHR1, LINC02210-CRHR1 readthrough, [Score=67.4, Expect=1e-13]; ENSG00000278232, CRHR1, corticotropin releasing hormone receptor 1, [Score=67.4, Expect=4e-13]; ENSG00000276191, CRHR1, corticotropin releasing hormone receptor 1, [Score=67.4, Expect=4e-13]} {Mouse: ENSMUSG00000018634, Crhr1, corticotropin releasing hormone receptor 1, [Score=66.6, Expect=5e-13]} {Dmel: FBgn0260753, Pdfr, Pigment-dispersing factor receptor, [Score=63.9, Expect=3e-12]} {Celegans: WBGene00015735, pdfr-1, Calcitonin receptor-like protein 1, [Score=62.0, Expect=1e-11]} {Smed: dd_Smed_v6_22246_0_1, dd_Smed_v6_22246_0_1, [Score=52.4, Expect=2e-08]} {RNA1509_31473} {RNA1310_51110.1} {RNA815_20842.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA